Array 1 1001-1171 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JMKW01000124.1 Helicobacter bilis ATCC 51630 T368DRAFT_scaffold00122.122_C, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence            	Spacer_Sequence                              	Insertion/Deletion
==========	======	======	======	===========================	=============================================	==================
      1001	    27	 100.0	    45	...........................	GAGTGGGGAGCTTCGGGCTGAAACACCATACAAAAATGGCAAAAA	
      1073	    27	  96.3	    45	......T....................	AAATGGGAATCTAGAGGGAGAAACACCATTTAAAAACGGCAAAGC	
      1145	    27	  96.3	     0	...........G...............	|                                            	
==========	======	======	======	===========================	=============================================	==================
         3	    27	  97.5	    46	AGAAGGCATAGAAAAATGGTATTATGA	                                             	       

# Left flank :   TAAAAATGATGAAGCACATGGCAATTTAAAATACTACACGGAAGATGGAAAGCTACTTGCTTTGCTTAAAGCCGAGAATGGCAAGATTACAAGCGGTAAATGCTTTAATGATAAAGTCTTGACAGACAAAGAAATAGACGAGATTAATATTAACGACATTGAAAAAGCACTTAACTATTTACAAGAAATATGCCTTAAAAGCGATTCTAAATAACCCTTGATTTTAAAACTATCTTAACACTTGCTAGATTCTCATCTTAGAATCTTTCAAGCTTTAATCTAAAATAGTTTTTGTAAAATACAGAATCTTTATCTTAATTTTAAAGGACAAATATGTTACTAAAAAGTGTGTTTATAGGTTTGTTTTCATTTTCTATTTTACATGCAGATATACTAAAAGAATGTAAAACTGAAGCGGATAAAATAAGCGGTTGTGTAGAAAAAGAGTATGATGAGAATGGGAATCTTAGAATGGAAACACCATTTAAAAATGGTGGAAG
# Right flank :  GAATGGGAAGCTTATGGCAGAAATACCATATTTAAACAACTTGTTTCATGGGGATACGAGATTCTACACAGAAGATGGAAAACT

# Questionable array : NO	 Score: 2.55
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AGAAGGCATAGAAAAATGGTATTATGA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:70.37%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//


Array 1 56614-56793 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JMKW01000010.1 Helicobacter bilis ATCC 51630 T368DRAFT_scaffold00009.9_C, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	====================================	====================================	==================
     56614	    36	  97.2	    36	...T................................	GCTTCTCTCTCTAGATTCCCATTCTCATAATACCAC	
     56686	    36	 100.0	    36	....................................	ATTTCAGCCCGAAGCTTCCCATTCTCATCATACACT	
     56758	    36	  97.2	     0	....................G...............	|                                   	
==========	======	======	======	====================================	====================================	==================
         3	    36	  98.1	    36	TTTGCTATGCCTTCTGCTTTATCATTTTTATATGGT	                                    	       

# Left flank :   GCGTATTTTTCCTGTAAAAACGCTTGTATTCTCTCTTTTTGATTGTATAGCACGACATGCACATCAGAGCTTATCTCTAATGCGGTATCAATCACATATTCAATCATGCTTTTACCGCATAGCTTATGCAAAACCTTTGGTGTATTTGACTTCATTCGTGTGCCAAACCCAGCCGCTAAAATCACCACTGATACCATATTTTTCCTTTTATAGCTTAGATTCTATTTGATACATACAAGGCTAAAATTATACATTATTTAGAGCATATTTCTTTTAAATAGTTAATTGATTCTTCAATGCTTTTGGGTCTACTAAGATCGTCTATTTCTTTGTCTGTTAAGACTTTATCATCAAAGCATTTGCCACTTATAATCTCGCCATTCTCACCTTTAAATAAGGCTAGTAGTTTTCCATCTTCTGTGTAGAATCTCGTATCCCCATGAAACAAGTTGTTTAAATATGGTATTTCTGCCATAAGCTTCCCATTCTCATAATACCAC
# Right flank :  GTTTC

# Questionable array : NO	 Score: 2.57
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TTTGCTATGCCTTCTGCTTTATCATTTTTATATGGT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,-0.60] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [1-1] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [66.7-5.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.27,0   Confidence: MEDIUM] 

# Array family : NA
//