Array 1 8595-8192 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQVL01000027.1 Seinonella peptonophila strain DSM 44666, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 8594 37 100.0 35 ..................................... TCTGCCATATCTCGCCATTGCGCTTCACCACTATT 8522 37 100.0 36 ..................................... TTGCGACATTAGAGCATAAACTGTACTTCTCGCGAT 8449 37 94.6 38 .........G.............A............. CCGTTTTATTTTTGAAACGGTAGGAAGGACTAGTCCAA 8374 37 97.3 37 .........G........................... GGGGCTTTAGGTTGAGTGATTTTTGTGGTGTTACCTT 8300 37 86.5 35 A........G.....G.T.....A............. CATTCTATAATGCTATTCATAGGAGAATTAAAGGG 8228 37 89.2 0 .........G.......T...T.T............. | ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 94.6 36 GTTTCAAAAAAAAGAACCTTGCTCAAAGGATTGAAAC # Left flank : CCGAATCTACCCTTTTGAACGAAAGAGCTTTTCCGACGGTCTATAGCTTCGTCTCAGATCTGGGGGACCGTCGGAAAAGGCGTAACGCAGGAATCACAAGGGTTTGAGGTGTAGAGGATCGTGGAATGTTCTTCATGATAGAGAAGAAATGTTATGATATACTGAGATCGTCGGAAAAAGCTTGTAAAGGCCTTGTGAATCATGGGGTTTTGCTGGTTGC # Right flank : TCCGCAAACCATTTCCGATTAGTAGGTAATAAAGAAAAATAAAAAGCGAGTTGGACACTCAATCCAACTCGCTTTTTACTTGCGATCAAAACTCAAACGAAATTGCAAACGTAACACGTTTTCTTCTGTTTCATCTCATTCTCTCATATTCCCCAAGCCCTTGATAGAATACGGTTTATTGTCTTTTAATTCTCCTGATTTCTCTATTTCACGGCACTTAAAATCTAGCGGTAGGTTACCAACGTGGTGGTTCGATTCTGATCCTTGGCACTATACATATCAAAGGTTTGTCCACTCAGGTGAAACTAAAAGTTTTCTACACAAGGCATTTTGCAAACGAAATGGCAATGAATATACTAGAGAATCTTGTGGTCAAAATATAGAGATTCTCAGATTTAATACTAACCATTGTGGTTTATGAAGTATTATATAGCTAAAGCACATCATATTCGATTGTTAACAAAATTTATAAAATAATCTATATACTATTATTTACCATA # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:0, 3:3, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAAAAAAAGAACCTTGCTCAAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 1 83426-83165 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQVL01000011.1 Seinonella peptonophila strain DSM 44666, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ======================================== ================== 83425 38 97.4 40 .....................................G ATAATAGATTCACTCATTTTCAAGATAATCGTCTCCTTTG 83347 38 100.0 35 ...................................... TGAGCGCAACAGGAAACGCTTTATCATCCAACTCG 83274 38 100.0 34 ...................................... TAGCACCTGATTTCTTCACTGCTATATCAGCAGT 83202 38 92.1 0 ...............A.C.....T.............. | ========== ====== ====== ====== ====================================== ======================================== ================== 4 38 97.4 37 GTTTCAAAAGAAAGAGCTTTGTTAAAAGGATTGAAACT # Left flank : GTAAAACCCAAGTCATGTGTGGTTGATGTAGAATTATTATAGTAGAATAAGGAGTAGGAAAATGCGAGTAGATCCCTAGTGGATCAGAGTTCGCCAATCGGCGCTTGTTCAATGGAAAGAGCTTTTGCTTAAAGGATTAAAACGGTTTGTCAAATGCTGATAGATCAACGTTAGATCAGTTTCAAAAGAAAGAACCTTCTAAGCTAGACAAGAATTCCTAAGGTATATAGTCTGGTAAGTATGAAATTCCGAATATGTATCGGTTGAGACTTGCACAAATCTGAATCTATCCCTTTGAACAAAAGCAATTTTCCGACGGTCTATAGCTTCGTCTCAGACCTGGAGGTCCGTCGAAAAAGGCGTAACGCAGGAATCCCAAGGGTTTGAAGCGTATAATTAACAGAGGATGTTCTTTATGATAGTGAAGAAATGTTATAATATACTGAGACTGTCGGAAAAAGCATGTACAGGGCATGTGATTCAATGGATTTGCTGGTCGC # Right flank : AACGACTCATAATAGTCAATAACTTCTTGCCACCAAGTTTCAAAAGAAAGAACCTTCTAAGCAAGACAAGGATTCCTAAAGTGTATAGTCTAATAAATGTGAATGTCCGAATAAGTATTGGTTACGACTTGGCACAAATCCAAATCTACCCCTTTGAACGACAGCCCTTTTCCGACGGTCTATAGCTTCGTCTCAGACCTGGGAGATCGTCGGAAAAGGTGTAACGCAGGAATCCCAAGGGTTTGATGCGTATGAGTAATAGAGGATGTTCTTTATGATAGTGAAGAAATGTTATAATATACTGAGATCGTCGGAAAAAGCATGTAAAGGGAATGTGATTCAATGGATTTGCTGGTCGCGGTTTCAAAAGAAAGAGCCTTGCTAAAAGGATTGAAACCAAAAATTTATCAAAGAGACAAATGACCTGATCAATGTTTCAAAAGAAAGAGCCTTGCTAAAAGGATTGAAACTGGGGAAATGAAGATGGTGAAATTTGCTGG # Questionable array : NO Score: 2.73 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAAAGAAAGAGCTTTGTTAAAAGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 2 95088-94754 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQVL01000011.1 Seinonella peptonophila strain DSM 44666, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 95087 37 100.0 35 ..................................... TTCAATACCTGATATGGCCATGACATGTTGACCTA 95015 37 100.0 35 ..................................... TTGTTCTGTTATAGACAAACCCAACCACATCCCAA 94943 37 100.0 44 ..................................... CATTCGATCGTGTCATATTCGATAGGAGCTGTTGGACGTTTTTC 94862 37 91.9 35 ......C.T............G............... AAGTTACCCATAAATGTTTGGATTGCTATACTAAA 94790 37 78.4 0 ...A.....A..TA.....C...G.G.....C..... | ========== ====== ====== ====== ===================================== ============================================ ================== 5 37 94.1 38 GTTGCATCCGGAATAACCTTTAGATAAGGATTGAAAC # Left flank : TTTCAGACCCCTATATATTGTGACAAATGAGGGGTAGCAAGTCATACGTAATGGTTTTTCAAATGCCTATGTATGTTGAAAATGAACAGATTCAAATACATAGCTCATCTGCCAAAGCCTAGCTAGACGAGGATGCAGAGAAACACCTTGGCTATAAACAACAGGTGGTATTGTGTATCTAATTAAAGATAATGAAAATAAGGTGAAGCAATCAGGGGTTCAAAAACGTATGGTGGGAGATTGTTTGATAGCTTTTCAGTAGAGAGCGGATAAGATAGAATAAGGATCAAGAAAGACCTCCATAATCAGAATGGTTGGATCAATTTGTAAAAAAACGCGAACCTCTTGCTCCGTTCAAACCCCAGAGGGTTCGCGCTCTATATGTATCAAGGGTTTTAGCCATTTTTGAGGAAATCATCGCAAGTATTAGTCGATGGAAAAATGGGGTTCGCGATTTGGGTCTTTCCAACCCAGTAACCATATAGGCTGATATCGCAGCC # Right flank : AATATAGTAGAAAACAAAATAATTGCCATTGTTGAAACATATGGACAATAATAAGAGATAGATTATTCTGTTATTAATCAGATAATCTATCTCTTTTTGGTTTAAAGTCGTTTATATAAAATCCAATGATACGGACAGGAGTAATAAAATGATTGTTTTACGTAACCTCCTTATCTCCCATTTGATTAGTTTAATGATTTTCTTCATCTCTCTTGCATATTTAATGATAGGGACTAAGGATACAATCGACTTTTATAGTTATGTTAGTTATTTCATCAGCAATATTCTACCTTATGTAGTCGTTTGGTCTTTACTGGCTACGGGAATTGAACGAAAGTTAGAAGATAAAGGGAAGAAGTTCTCCTTTTATGTGTATCTCAGCATGGGTATGGGGTTTTCTTTGATCCGGTATTATTATGCTCATGCGTTAAATGAACCTAAGTTAGATGATTTCAATCTCTTCGTTCTTTTCACTTTTATTAGCTATTGGTGGCTACAAC # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:0, 3:3, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCATCCGGAATAACCTTTAGATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 1 24366-24099 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQVL01000018.1 Seinonella peptonophila strain DSM 44666, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 24365 37 100.0 46 ..................................... GATACAGGTCTGCGAGTTGTTGCGCTGCCTGTTTAGGATCGTTGGC 24282 37 100.0 36 ..................................... CAAAGCGCTTCTGAGATCATCCCAAAATAGGATAAA 24209 37 94.6 37 .....................C.T............. CATTGATCAATATCACCTAATTTTTGATAGTAAAGAT 24135 37 86.5 0 .............A...C...C..GG........... | ========== ====== ====== ====== ===================================== ============================================== ================== 4 37 95.3 40 GTTTCAAAAGAAAGAGCTTTGTTAAAAGGATTGAAAC # Left flank : TGTGAGCAAAAAGAGAAAACAAAAAGCGAGTTTGGACTCTCAATTCTACAACTCACTTTTCCACATCTATTCGAAAGTGTGAAAACTGTGGGGAAACTTTCTGATTGCTACAGTAGGTAAAGTCCGACTTGTTTGCTGCTTACAACTTGAAAAGAGATCAACACGAGATACAGCCATGGTTGGCTAAGTTATCATGTCAATATATTCGAATGAATGTGGATTATAGGGAAATTAAAAGTGAAATATCTGAATAGGAATTGGAAAGCGATTTGGTATAAATCCGAATCTACCCTTTTGAACGAAAGAGCTTTTCCGACGGTCTATAGCTTCGTCTCAGATCTGGGGGACCGTCGGAAAAGGCGTAACGCAGGAATCCCAAGGGTTTGAGGTGTAGAGGATCGGGAAATGTTCTTCATGATAGAGAAGAAATGTTAAGATATACTGAGAACGTCGGAAAAAGCTTGTAAAGGCCTTGTGGATCAAGGGGTTTGCTGGTTGCA # Right flank : CTGATAATTTGGGCATAGCATATGGGAAGAAGTATTAGAAGTGCGAATGTGTACTGCACATGATTTCCCTAGGAGTTTCGCACCAAAATTATCGATCGTATGTTGTATGTTTGTTTTCAGAGAGTTCTTCTATTTTTTGAAGAAAATGATGATTTTTGAGGTGGAATGATTATAAATGAGTATGTTTCATCCGAAAATCGCTATCACATCCTAATGGATGTGTGGATTGAGATTCCTTTTCACTCTTCTATAAAGATCATTTAGAGGACAATCAGTACGAGTTTGTCCTTTATCCAAATGAAGAAGTGAATATGTAAAGAAAGTCAACCATCGAAAAAGGAACTAGAGTAATCCTTGTGGCTCGTGAAGGAAGAGCAGTTGAAGGAAACCATGAAAAATTGAAACAGGGGGAGTAACGTCTGGTTATCGAGTCACATATTTCTCCAGGAGCTGTTTTAACTGAATTGCCAAATGCCAATACAGATGAAGATATAAAATCT # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:0, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAAAGAAAGAGCTTTGTTAAAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 26483-26226 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQVL01000018.1 Seinonella peptonophila strain DSM 44666, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================= =================================== ================== 26482 39 100.0 35 ....................................... TGGCATTCATCGTTACCTGAAACCTCCTGTTTCAG 26408 39 97.4 33 .....................................A. TACAAAGGTAACGGCAGGGCAAACCATTATTGG 26336 39 100.0 33 ....................................... CAAAGGGCAAAATACCCTTCAGAAGATGAATCA 26264 39 94.9 0 .........G..........................T.. | ========== ====== ====== ====== ======================================= =================================== ================== 4 39 98.1 34 GTTTTAAAAAAAAGAGCTTTGCTAAAAGGATTGAAACGA # Left flank : AACGAAAAGTCTATTTTTCTCTTCCATTTAATCGCAGGTTTCAAAAGAAAGAACCTTGCTCAAAGGATTGAAACGGGGCTTTAGGTTGAGTGATTTTTGTGGTGTTACCTTATTTCTTGTTTGCTGCTTACAACTTGAAAAGAGATCAACACGAGATACAGCCATGGTTGGCTAAGTTATCATGCCAATATATTCGAACAAATGTGAATTATAGGGAGATCGAAAGTGAAATGTCTGAATAGGAATTGGTAACAAAACTGGAAAGCGACTTGTCACAAATCCGAATCTATTCTTTTGAACGAAAGAACTTTCCCGACGGTCTATAGCTTCGTCTCAGATCTGGGGGACCGTCGGAAAAGGCGTAACGCAGGAATCCCAAGGGTTTGAGATGTAGAAGATGGTGGAATGTTCTTCATGATAGAGAAGAAATGTTATGATATACTGAGATCGTCGGAAAAAGCTTGTAAAGACCTTGTGGATCATGGGGTTTGCTGGTTGCG # Right flank : CTTTTTGGATTTAGCGAAATCTTCAGTCCGTTTCGGGTGAAAAAACCTACTTATGGGGTTAAAGCTGTTTATCAAATAATCCCAGAAATTGACTAATTCGAAAGTGAGAAAAACTGTGGGGAAGCTTTCTGATTGCTACAGCAGATAAAATTCGTCTTGTTTGCAGCTTACAACTTGAAAAGAGATCAACACGAGATACAGATACTTGGTTGGCTAAGTTATCATGCCAATATATTCGAATGAATGTGGATTATAGGAAAATTGAAAGTGAAATGCCTGAATAGGAATTGGTAACAAAACAGGTAAGCGATTTGGTATAAATCTGAATCTACCTTTTTGAACGAAAGAACTTTTCCGACGGTCTATAGCTTCGTCTCAGACCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAAAAAAAGAGCTTTGCTAAAAGGATTGAAACGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 3 42388-41972 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQVL01000018.1 Seinonella peptonophila strain DSM 44666, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 42387 37 100.0 39 ..................................... CGCGGGAAATTCACCATCAAAAAACACGTCTCCATTGAT 42311 37 100.0 39 ..................................... GATATCCTGTTCCACTTTAGGCAGTCCCGCGATAGTCTG 42235 37 100.0 36 ..................................... TTAGTCTTCTTAGTAGGATTTGGTACTGGTTCTTGA 42162 37 100.0 45 ..................................... GACGGTCACAAATGCCATGAGATGACCGTATCTTGTTTTAGTTTG 42080 37 94.6 35 .................T...T............... TGATTACCTTGCGGGTCGTTATCGATTACCAAGAC 42008 37 86.5 0 .....................T.T......A..T..C | ========== ====== ====== ====== ===================================== ============================================= ================== 6 37 96.9 39 GTTTCAAAAGAAAGAGCCTTGCTAAAAGGATTGAAAT # Left flank : ATATTTTATTTGTTTAGATTAAATGGAAAATATTCGTTTTACAGATACATAGTTGGCTGAGTCATTGATCCAGTAGTGAGTTTAAATGGTCTATACTAAGAGGAAGGCGTCGTTTATTGGATGGAGAACCAAGATATATAGAATAAGGATAGATGCGGTAGTTAAACTAGTCAAGGATTCCCAAGGTATATGGTCGAGTGAATATGAATTAGGGAGAAATTGAAGGTGAAAACACCGGATAGACGTTTGCTTAAAAGCTATATAGCGACTCGATCAAATCCGAATCTACCTCTTTGATCGAAAGCATTTCTCCGATGGTCTATAGCTTCGTCTCAGACATGGGAAACCGTCGGAAAAGGCGTAACGCAGGAATCCCAAGGGTTTGAGGAGCATGAGTAAAGGGGAATGTTCTTCATGATAGAGAAGAAATGTTATGATATACTGAGATCGTCGGAAACAGCTTGTAAAGGTCTTGTGAATCAAGGGGTTTGCAGGTTGCT # Right flank : CCCACCGCAAACTATTCCTACGCGAGGATGCACTCGGATAAAATCCGCGATAATCACGTATTCTTTGTTGTTGCATCCAGACTAACCACTTTTCTCCAAAAAGGCTTAAAGTCTATTTACTTACAATTTGTGGGCAATAAGAAAAAACAAAGAGCGAGCTGGACTCTCAATTCTACTCACTTTTCCACACTCTTCGAAAGCGAGAAAAACTGTGGAGAAACTTTCTGATTGCTACAATAGGTAAAGTCCGACTTGTTTGCTGCTTACAACTTGTAAAGAGATCAATACAGCCATGGTTGGCTAAGTTATCATGTCAATATATTCGAATGAATGTGGATTATAGGGAAATTGAAAGTGAGATGCCTGAATAGGAATTGGTAACGAAACTGGAAAGCGATTAGGTATAAATCTGAATTTACCTTATTGAACGAAAGCACTTTTCCGACGGTCTATAGCTTCGTCTCAGACCTGGGGGAGCGTCGGAAAAGGTGTAGCGCAGG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:0, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAAAGAAAGAGCCTTGCTAAAAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //