Array 1 5060-3627 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOCH01000234.1 Lactobacillus nasalidis strain YZ02 sequence234, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5059 29 100.0 32 ............................. CTCCATGTCGTCCTCCTGTACCATTATGGTAC 4998 29 100.0 32 ............................. GTCACGGTAGAGCTCACTCCGTTGCTCCCGAT 4937 29 100.0 32 ............................. ACGCCGCTGAAATCATCACCGAGCAACTTCAA 4876 29 100.0 32 ............................. ATGCTCCTTTTGAGCCTGAACCCAGCGATTGA 4815 29 100.0 32 ............................. ACCCCCCGTACCACTGTGTTAGTGTGCTAGCA 4754 29 100.0 32 ............................. GTCTCTGTCCATGGCTGCAGCGGCTAGTGCAA 4693 29 96.6 32 ............................C AGGTTAGTCTCAAACTTTTGCGTCTGTGGTTT 4632 29 100.0 32 ............................. CATCATCGTTATCACCCCATAAGTAAAAGCCA 4571 29 100.0 32 ............................. GTCATTAGTCATTTTTTGCATCCCCCTTAACT 4510 29 100.0 32 ............................. ATTTCTTTAGCTCACGGGGCCAGGTTCCAAAT 4449 29 96.6 32 ............................C GCAGCCTGGGAGGTTGCGTTTTTTTAATAGGT 4388 29 100.0 32 ............................. TCGGGACATCTGTAGAAGTCTGCCGGGACTAT 4327 29 100.0 32 ............................. GTGGTTCATTGGTGATTTAGTAAAGTTAGCAT 4266 29 96.6 32 ............................C CAAGTCTAAGGCCTGGGCCAGCTCTGCCGACT 4205 29 96.6 32 ............................C TCTGCTGCTGCCAGAGCTCAGATTTTCCAAAG 4144 29 100.0 32 ............................. TACCCACGTTGCATTGCCGCTTTTATCAACTT 4083 29 100.0 32 ............................. AACATCTTAATAAAGTAGAAATTATCCTGCTC 4022 29 100.0 32 ............................. ATAGAGCTGCACGAGGTTGTCGTCGCCAAAAC 3961 29 100.0 32 ............................. GTAATCCAGGAGGATCGACCTCTTGTTAAGGT 3900 29 100.0 32 ............................. TATGTGGGGTTATGGATCCGGATCAAACGGAA 3839 29 100.0 32 ............................. CATCAAGGCCATTCTTGAAAGACACGAAGGCA 3778 29 100.0 32 ............................. CTTGGCGCAAGCGGGTAAACTCGTTTACTTCA 3717 29 93.1 32 ............C...............C TCCCCCGTGACGCTCAACATGGACCAAATTTC 3656 29 82.8 0 ............C..........C..AAG | C [3629] ========== ====== ====== ====== ============================= ================================ ================== 24 29 98.4 32 GTATTCCCCACGTAAGTGGGGGTGATCCT # Left flank : GGACTAAATACGGAAATTGATCAGATTTTGTCTATTGGTGCGGTGAAACACGATGGTACGGAATATTACCGATTGATCAAGCAAGACGTTGATGTGCCAAAACAGATAGTGGAGCTGACTGGGATAACTCCTGCAATATTGAAGAAGGAAGGCGTTCCGCTGCAAGATGCATTAGGAGAATTGGCTGATTTTGTTGGGGATATGCCAATCGTTGGATATAATTTTAGATTCGATTCTGCATTTTTGAATAGAGATTATCGGAAATTCGGGATGCAAGAATTGAGAAATGAGATTAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTCCTGGACAACTATAAGCTGCAGACTGTATTATCAAACTATGGGATCGAAAATAAGATGCCACACAACGCTGTGTCTGATGCAAGGGCTACGAAGGAGCTGGCGATAAAACTAATCAAAAATCGCATTTTAGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : TTTCTATTAAAAGGCGAGCAAAGTTCACGAATCTCTGGTAGAGTAAGTAGTAGAAGAAAGAATGATGAGGAAAAATTATGAGTATTTACGGTAAATATGCTGCTTATCTTCCAGAAATTTTGGACGATACGTTAAAGCAAATTCAAGAAATTAGTCAAGAATACAGTGAAAAAACGGGACAAAAGCTTTACGAACACCTTGAAGGACGTGTCAAGGGCGAAGAAAGCATGACTCAAAAATGCCAAAAGAAGGGTCTCCCGCTGACGCCAGAATCAGCGCTGATTGAAAACCGTGATTCCATTGGCCTCAGAATCGTATGCAACTTTATTGACGACATTTATACTTGCATCGATCTATTAAAAAAGCAGGACAATTTTAAAATCATCAAGGAGAAGGACTACATCACCGATGCCAAGCCAAACGGCTACCGGTCTTACCACTTGATCATGGAAGTAGTTACTCCGTTTGAAGACGTCCACGGCAACAAGCCAGGCACGTAT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTAAGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //