Array 1 1738287-1736132 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP014658.1 Bifidobacterium longum strain 105-A chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 1738286 36 100.0 28 .................................... ATAAGTGTATAATCCTGTGGATAACTAA 1738222 36 100.0 28 .................................... CAAATGATAAAGCGAAAACCGCAATACA 1738158 36 100.0 28 .................................... TCTACCGACGTGATGGGCAACTACACGA 1738094 36 100.0 28 .................................... GTGCATGGCGACGTCACATACGACCCGA 1738030 36 100.0 29 .................................... GGACTCCGAACACTGTAATCAAGTTGTGT 1737965 36 100.0 28 .................................... TGTTTGGTGGCGTATTCGCCGGCCTGTT 1737901 36 100.0 28 .................................... TAGGCGATGCCGTTGTTGTTGCCTGCGC 1737837 36 100.0 28 .................................... CCATACAACAGTGACGGACCGGCAGATA 1737773 36 100.0 29 .................................... TCGTTAGGGATACGCCGGTGGTGGTGTCG 1737708 36 100.0 28 .................................... ACGCGGAAACTGTAGAAGTGCCCGCGAA 1737644 36 100.0 28 .................................... AGTCATTTGGTGTGCCTTTCACGATGAT 1737580 36 100.0 28 .................................... TTGCATACGATGTCGAATATCCCCTCTC 1737516 36 100.0 28 .................................... TGTCCTGCATTTCGTGCAAGACCGCTTC 1737452 36 100.0 28 .................................... TGTACGCTGACGAGTTTCCTGTTGCTCA 1737388 36 100.0 28 .................................... CGGCCCAACGGAGGTAGGTGCTGCGATG 1737324 36 100.0 28 .................................... CCAGTTCGACGCGTAGGCGCGAGTGTCC 1737260 36 100.0 29 .................................... CCCTTGCGCGTACTGTGCTTGTAGGTGGC 1737195 36 100.0 28 .................................... CGTAAACCTTGTTAAACAAGTTGTCAAA 1737131 36 100.0 28 .................................... CTGTGGCTTCTTCACCTTCGGCACCTTC 1737067 36 100.0 28 .................................... TTTTCTCCAGCACACGGACGTAATCGGC 1737003 36 100.0 29 .................................... CCAAGTGTGGGCCGAACTCAACAACTAAG 1736938 36 100.0 28 .................................... TCAATTCCGCGTCAACTTTCCAGCACAT 1736874 36 100.0 29 .................................... CGCCTCGCCGCCGCACGAGAACGAGTCAA 1736809 36 100.0 28 .................................... TATGGTGTAGCCAACAACAAAAACAAAC 1736745 36 100.0 29 .................................... CCCTTGCGCGTACTGTGCTTGTAGGTGGC 1736680 36 100.0 28 .................................... TATGGTGTAGCCAACAACAAAAACAAAC 1736616 36 100.0 28 .................................... CGGGTAACAAGGTGGACATGCTCATTGA 1736552 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 1736487 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 1736423 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 1736359 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 1736295 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 1736231 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 1736167 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 34 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTACGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCAACTGAATATCTTTAAACTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTATA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //