Array 1 59608-57058 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMHY01000042.1 Acinetobacter baumannii AB_909-01-7 AB_909-01-7_43, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 59607 29 100.0 31 ............................. GTCTTTGCCAAGTATGTTAAAGACCCAGCAC 59547 29 96.6 31 ............................C TATTTATTTAAAAACATTAAACGATTTAATT 59487 29 100.0 31 ............................. ACTGTAGTGGGTCATAAGGAGATTTAGTTAG 59427 29 96.6 31 ............................C AACATATGGAATTGCAGCAACCGATGCATAA 59367 29 96.6 31 ............................T AGTTCATCAAATGAAACTAACGCTTCCCATT 59307 29 100.0 31 ............................. CTCAGGCAATTGTTGGGAAAAGTCGATTTCT 59247 29 96.6 31 ............................T GTTTCAAGGTCTCGGATAATTCCACATTCAT 59187 29 100.0 31 ............................. TATACATCGTTATTGCATTCTGCATATCCCA 59127 29 100.0 31 ............................. TTAAGAGAGGCTTGTTTAGATCAATACTTGC 59067 29 100.0 31 ............................. TAACAGGTCAAGTTACTGTTGACCCGGTAAA 59007 29 96.6 31 ............................C CAAGGTGTGCGCACCAAAGCAAAACCAATCT 58947 29 96.6 31 ............................G CCCACAGGTTGAGCATCAACGGCCATCGAGA 58887 29 100.0 31 ............................. TCATAGAGCTCACTTTGTCGTTGAGCCTGCA 58827 29 96.6 31 ............................T TGTAAAACCTCTGGATTAAGCATTGCGTTCA 58767 29 96.6 31 ............................T CTTCCTGAGTTTTAATCCCATTTGCCTTACA 58707 29 96.6 31 ......T...................... AAATGACCATCAATCGACAGTGGTTTACCTT 58647 29 96.6 31 ............................C ATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 58587 29 100.0 31 ............................. GAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 58527 29 100.0 31 ............................. ACACGTTCTCTATATCGCTGTTTGCGGTCAT 58467 29 96.6 31 ............................T TCAGTTGGATATGCCTTTGATACCAAGAAAC 58407 29 96.6 31 ............................T CTCCCCCCTCCTCGATCGGCTGTGAAAGTAC 58347 29 96.6 31 ............................T TTAAATCGTCATATTAAGGCGCAGTTCCGAA 58287 29 100.0 32 ............................. AAGATCTGACCAGCTAAAACATTCTGGTTATC 58226 29 96.6 31 ............................T AGAAGCAGAAAATATCCAACTCATTGCTACT 58166 29 100.0 31 ............................. CATGGGAGCTTTCATTCATATATGTCATTAG 58106 29 100.0 31 ............................. CGTCCACGGTAGCGGCGCCAAGGCTGCCAAT 58046 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 57986 29 89.7 31 ...AC.......................G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 57926 29 89.7 31 ....C.......G...............T TAAATGCTCAACTACTTCTGTAGCTAATGGA 57866 29 86.2 31 ...GC........C..............T CTCAACTCATTGATTTTTTCTTCTCTTGCCA 57806 29 93.1 31 ...GC........................ TTTTTATTCCAAGGGCTTTTGCTTCTTGTGA 57746 29 86.2 31 ...GC......T................T TCAAATGATTTAATGAGCTTGTAGCCATTTT 57686 29 86.2 31 A..GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 57626 29 82.8 30 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTT 57567 29 75.9 31 CG..G.......CC......C.......T TTATAACCACCAGTTAAAGTATTGACTAAAA C [57562] 57506 29 75.9 31 ...GC.G...A..C.AT............ CAATCGGGGACGTGGTCAAAAAGATTATCAG 57446 29 93.1 31 ....A.......................G TGTTGATGTTGTTGTTCAGATCGTTTTTGGT 57386 29 79.3 31 ...GC....T..TC..............G ACATGCGAGCTTTCATTTAAATGTGTCATCA 57326 29 93.1 31 ....G........C............... TTAAAGCATTTTCATATGAGCCTTCCTCATT 57266 29 82.8 31 ....A......TCC..............T TCGGATCAGTCCAGTCATCATTCTCGTCAAT 57206 29 86.2 31 T..G........G...............T ATTATTGCGCGACAGAACGTATCAATTAATG 57146 29 89.7 30 ...GC.......................C AAGCTGATGCTTCCTTATGGTTACAGTCAG 57087 29 82.8 0 .G..G...................AT..T | C [57082] ========== ====== ====== ====== ============================= ================================ ================== 43 29 93.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACCCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTCGACCTCGCTGATCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAACTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGATATATGTAGTAAAATCAAATAAAATCATATATTTAATCTAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAGAAAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATTTTGGTGATGGCGTCAATTGAACAAATATAATAATATACTGATTTATCTTAATTAATTTTTATAAAAAAATCCCAGTGTACATGACAGTGTACAAATTATATGTTGCTGGCCTATTTCCTTCGGGTTTGGTTGCTATATACGGAGTACAACTCATGTATTAAACACCTTACTGGCAATCCAGTAACACTACCCTACTCCACCACTTACACAGCATCACTTCGACATCTCGTCAACGCAATTTTGCGTTCGGCATTGTTTTCAAAAGTTTATCCAGAATTAGACGCACCTAAAACCCGATAAAACCCTATCAACTCTTATCATTAGCTCTTAATAAAACGTAGTCTTTTATCCAGGTAGCTACTACGAATTTCTCGTAGTAAGGCACTGTATTTGAAACATGGAAATGAGATTCCTTAAATTAGCGATAAACCTTGTTGTATATAGC # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [53-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 64698-66219 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMHY01000042.1 Acinetobacter baumannii AB_909-01-7 AB_909-01-7_43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 64698 28 100.0 32 ............................ TAACGTGGTGTGAGCCGAGAACCTGCAAGCCA 64758 28 100.0 32 ............................ TTTTGATGAGCAGGTATTTACACAATATAAAT 64818 28 100.0 32 ............................ TGATCAAGAATGATATGTACTAGCTCACTATC 64878 28 100.0 32 ............................ TTCGAGTCATAATTATAGTAAAAAGTCATCTT 64938 28 100.0 32 ............................ TACATAAAAATGCGGACCCAACGATAAGGATT 64998 28 100.0 32 ............................ ATTAATCGAGGAAAAAAAACATGAATGTTAAT 65058 28 100.0 32 ............................ ATCACTTAACCCATCATCAATAAGTTGGCCTT 65118 28 100.0 32 ............................ AGTCACCATTGTTCGAAGCTGTTGGGTCATTA 65178 28 100.0 32 ............................ TTGTTGCATCATTTGCGACTCATGACTATTTG 65238 28 100.0 32 ............................ AAATACAAAGTTAGGTATTGGTACTGGTGAAA 65298 28 100.0 32 ............................ AATATCCACCAATGATTTTGGTAAAGATAGAG 65358 28 100.0 32 ............................ AGACACATACGTAATGGTGTCAATATCGTATA 65418 28 100.0 32 ............................ TGCCCCAGCGAGCAAACGCCTTAAAAATCCTG 65478 28 100.0 32 ............................ GAGATTTTTGTGCGCTTATAGAACATGAGCTT 65538 28 100.0 32 ............................ GTAGGGATAGTGAGATTGTAGACCTTACAATG 65598 28 100.0 32 ............................ CCGCAGATTTACGGATGCCTGTAACTGTCATG 65658 28 96.4 32 ...A........................ TATCATGAACATTGTTCCTTGACCCACGGGCA 65718 28 92.9 32 ...A.....T.................. ATTCGATAGACTGATTCTATAAGCTTATTTGC 65778 28 100.0 32 ............................ TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 65838 28 82.1 27 ....C......TCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 65893 28 92.9 32 ....C....T.................. AAACAACGAGCCTTGTCGCGGGTCGCCCATGT 65953 28 96.4 32 ...A........................ CAAATCAAAAGTGCAGTTGCTGCCTCAATAAC 66013 28 96.4 32 ...A........................ TCTTCATCTGTTACATATGAAGCAAGGATCTT 66073 28 92.9 32 ...A.......T................ GTCAAACGACAGGGCTATAAACACTTAATCTT 66133 28 96.4 31 ...A........................ ACATTCAAAGAGGCTCATCGAATCCAATCGA 66192 27 78.6 0 A..T........TC........C.-... | A [66196] ========== ====== ====== ====== ============================ ================================ ================== 26 28 97.1 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCCTCATTTAATAAAGTTCGAGCACTAAGATAGGGTAAATCAAGTGCTTGCTGTTTACTTAAACGAATCCCGCCTTTTTCAATATTGGAGTTAATCGTCTTTAAACTAAAGTGTACTGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : ATTTCTCTTTCGAAATTTAAAACGACATGTTTTGTCGTTAAAAGGCCGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAATATTATATTTTTATTACATTCGAACTTTAACAATAAACTATGCATGTCATTCTCATCTCTGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTGTGGATAGCTATGCTATTCGTACAGGACATTCATCTTGGCAAGCACCAATGACAATGGAAGGTTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTAGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTAGGAGCAAAGCATAAATTTGCAAACGATGGTGCATATCCAGTTGCATCGACCAAAAAACAACAAAAACTACTAATGCTAGATGAATGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGGGACATGCATGATATCGGTAAGGCC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //