Array 1 6946-12275 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWPL01000029.1 Blastochloris sulfoviridis strain DSM 729 NODE_29_length_42053_cov_33.8432, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 6946 37 100.0 31 ..................................... AAAGCCTGCGTCGGTGCCGTCGAGGGTGAGC 7014 37 100.0 32 ..................................... AAGGCATACCGCCCCTCTACTGGTAGCTTCCC 7083 37 100.0 33 ..................................... TTTCCAATCGGGTCGACGCCCCGGATCAGCCCT 7153 37 100.0 31 ..................................... GGCCACGCGGCCCCTCTCCACGATTCGGCGG 7221 37 100.0 32 ..................................... GCCGGGGTGCCGGCCTCTGGAGCGGGGCTTGG 7290 37 100.0 31 ..................................... GGAAATATAGACTTCGTACTCCTCATCCTGC 7358 37 100.0 31 ..................................... GACGTAAATACGCGTTGTCATTTTCGTCTCC 7426 37 100.0 33 ..................................... CTGCTTTTCGAGCCTCGTAGCCCGGTTGGCCGC 7496 37 100.0 36 ..................................... TCATTTTTTCGATTTCGTTGTAGTCGGCCATGCGGG 7569 37 100.0 32 ..................................... CGTTCGGGCAAACGGCCTGATAATCGAGAAAG 7638 37 100.0 31 ..................................... TCTATCTGCCTTGGAGAGAGTGGGGCAAAAA 7706 37 100.0 33 ..................................... GTCGTCGTATCCTCCAGCACCCCACCAGCATCG 7776 37 100.0 32 ..................................... TTAGGTCAACGGTGGTGGTCGAAGTCATCGTC 7845 37 100.0 31 ..................................... GGGAATACTGCCAGAGCGAGGCCACGATTCC 7913 37 100.0 33 ..................................... GCTGATGGACCCCGGCAGCAGCAACGAGCGCCC 7983 37 100.0 32 ..................................... GGACCCCCATGGCCCAGCAGGCCAGAAGGTGC 8052 37 100.0 31 ..................................... GCGACGAGGGGCCGGGGGCCCGTTCGTCGCG 8120 37 100.0 32 ..................................... ACATGGCTTTCTCCTTGAAACGAGGGGGGTCA 8189 37 100.0 33 ..................................... GGCCAGCTTCAACTGGCCCTCCGCGTCGTTGTA 8259 37 100.0 31 ..................................... AGAGCCCGACGACCCAGCCCGCGAAGGCACC 8327 37 100.0 33 ..................................... CGCGACGGCGACGTAGCCGTCGACGCAGAAGAC 8397 37 100.0 31 ..................................... CGCAGCAGAGCATCACAAACCGGCCAACTGG 8465 37 100.0 31 ..................................... GCGCTAGAGCTTGCGCGTCTCGAAGATGATG 8533 37 100.0 34 ..................................... CCCAGATTCGTTGGGCTTTTGTGATGATGGTACC 8604 37 100.0 33 ..................................... CGCGATGGGCCTGCCACCGTGAAACCAGTATTC 8674 37 100.0 29 ..................................... CTATTCCCCGCCGCAGCGGTCGCGCTCGA 8740 37 100.0 31 ..................................... CCGCAGCGGTCGCGCTCGAAGCGAGCTTCGA 8808 37 100.0 31 ..................................... TTCGCGGGGGCGCAGGGTTCGCTTGCTGTAA 8876 37 100.0 32 ..................................... TCACGTACCTCAACAAGTGACCTCCCCCAAGC 8945 37 100.0 33 ..................................... CAAATGGAGAACTCCCCCTCCTCCTCAACCGGG 9015 37 100.0 31 ..................................... TTCAGCTCGTTCGAGTTCAGGAAGGTCGTGG 9083 37 100.0 31 ..................................... GTCGTTTTATTATTGAAGAACCAGAACATGC 9151 37 100.0 32 ..................................... AGGCAGTTCATGGTGGAATCCTCCTTCCATGA 9220 37 100.0 32 ..................................... CGCACCATCTTCTGGTGCGTGCTCTTGGCCAC 9289 37 100.0 29 ..................................... CGTCGTACATTTTTTCGATTACATTCCGA 9355 37 100.0 33 ..................................... CCGCGACGGAGGCCGTGGTGAGGGCGGCGGCGA 9425 37 100.0 31 ..................................... GTTACTTTCCTCCGCCACCACGGGCAAGAAG 9493 37 100.0 32 ..................................... CCATCAAAACATTGAAGGATTGAGGAAAAAGC 9562 37 100.0 35 ..................................... CGTTGAACATGGTAAGCCCCTTTTGGAAGCCATGA 9634 37 100.0 31 ..................................... ACAAGGATCATAGTAGTCTCCTGAAGGTCTG 9702 37 100.0 32 ..................................... AACATCGCAGGCCGGCTAAACCGGTCGACTGC 9771 37 100.0 31 ..................................... GCTATGTGGTGCGCACCACGGCAGGTGTTGG 9839 37 100.0 30 ..................................... CTCCTGCCGCGGGATTGCGGCAAATTGGGG 9906 37 97.3 31 ......G.............................. AGAGTGGCGGCGGCGGCGGCGAAAGAAGTAA 9974 37 100.0 32 ..................................... GTGTGATTGTGAGTAGAATCGTGTCTTCCCGG 10043 37 100.0 31 ..................................... TCCGGGCAGCGGCAGCCGAGGCCACCCGAAC 10111 37 100.0 32 ..................................... TGAGCGACGGCGCTTCGCCTGCGCGGGCGCCG 10180 37 100.0 31 ..................................... GGCGAAATCGGCGGCGGTGGCGGAAGCGAAC 10248 37 100.0 31 ..................................... GGGCGAACTTGGTCATTGTAGTCCCCAATAG 10316 37 100.0 32 ..................................... CGCGATGTCCCGCGGGCGGGGGCGGGGCGTGG 10385 37 100.0 31 ..................................... CAGTTGAACCCCAGTGAGACGCACTCTGTGC 10453 37 100.0 31 ..................................... GCCGCCCGAAGGGCATCATCCAGCGAAAACT 10521 37 100.0 31 ..................................... AACTACGTCAGCGCAGCGCGGGATGAGGTGC 10589 37 100.0 32 ..................................... TCGCCATTCTCGGCGCAAAGCGCGAGAAAAAA 10658 37 100.0 32 ..................................... GAATCTTTCGATGGCTCTCGAGAGGATGGACG 10727 37 100.0 31 ..................................... ATCAGGGTGCTCTCAATCGGCTTGCGAAGCC 10795 37 100.0 31 ..................................... GCCGCATAGGTCGGGGCGACGGCGACGGTGG 10863 37 100.0 31 ..................................... TTGTCCGAGACGCCAGCCGCGCCGTTTGTCC 10931 37 100.0 31 ..................................... CTCAACCCCGTCCGCAAAGCAGAAGGGCTGG 10999 37 100.0 32 ..................................... GCAACCCCGGTGGGGTTGCCCTCTACGAGGAC 11068 37 100.0 34 ..................................... GGATTTCCGGGGCGGATCGCTCTCGTAGGTCGGC 11139 37 100.0 32 ..................................... GCGGATGGTGAGGCCACAGGGCTGTCCGGCGA 11208 37 100.0 32 ..................................... CCCACCCCTCTTCGGGGCGGCCGACCTCCGCC 11277 37 100.0 31 ..................................... CTTGGTGGTCGTGTGCCTGACCACCGCCCTC 11345 37 100.0 32 ..................................... ACGGCACTTCCGTGCCGTTCCGGAGGTCCTTC 11414 37 100.0 33 ..................................... GTTGTGCTGGGTCAGATTAAGAATACGGGTCAT 11484 37 100.0 31 ..................................... GTCGGCCCGTGCGGCGTCGCGCCGGGCCTTT 11552 37 100.0 32 ..................................... CCACCGCTCCACCTCCTCGCGGAGGATCCGGC 11621 37 100.0 30 ..................................... GGGGAGTCGTTGATCAGTCGCCCGCGTTGA 11688 37 100.0 31 ..................................... CGACGGGTCAGGTCATCGAACTGAGCTTGGA 11756 37 100.0 30 ..................................... TCAGGTCGCTACGGGGCATCTTCTCAGCCA 11823 37 100.0 31 ..................................... CCATGGGGTCGCTCCCGTCCAGAGTCAGAAC 11891 37 100.0 33 ..................................... TGCGTCCTCCCCGGTGGTTACCGATGGAGAACC 11961 37 100.0 35 ..................................... CGACCTTCTCCCAGCCGAAGCCGGTGGTCTGCGCG 12033 37 100.0 31 ..................................... TCCTCCTCCGTCAGGCCGAGGTGAGCGAAGT 12101 37 100.0 33 ..................................... GCTCGCGCCCCGCGACGATCTCGAATACCTTTC 12171 37 100.0 31 ..................................... CGCAGCGGTCAATGACGAGTTGATACAGATC 12239 37 89.2 0 ...............................AC..TG | ========== ====== ====== ====== ===================================== ==================================== ================== 78 37 99.8 32 GCCCTGCTCAGCGCCCTGATCTCAAAGGGAATGAAAC # Left flank : TGCGGCCAGCCCGACGTCGACGCGGCGGACAAGGACGGCGCAGGTGAGGCCGGCGCGTGAACCGGCGCTGCACTTACGTTGTCGCCTACGACATTCGCAGCCCGCGTCGGCTGGCACGGGTGGCGAAGGTGTTGTCGGAGATCGGCTTTCGCCTCCAATATTCGGTGTTCGCGGCGGATCTGACCGAGCCGGCGCGGGGGCAGTTGATCGCGCGGCTGCGAAAACTGATCGACCCGGCTGAGGATGACGTCCGCATCTATCTGGTGCCGGAGGCGCCGAGCGGGGCGTGGTTTGGCAGTGTGCCGGGAGGGGATGTGATGTCGGTTTCCGGCGCGCCGGCAGCGACGCTGGCGACTCGGCTGAAAGAGAACATAAGAAACACAAAAAGAGTACAAAGATGAACAAAATCAGACATATTCATGGCAGCTTCGAGGCTGAATTATTTTTTGGAATGGCCCCTTGCAACTCATTCGAATCCAAGCACAATTTGGGGGTGACCA # Right flank : GGAGCATCGGCGGTGGCCATCACGGGCGGCGTTGACGCAAGACATGGGGAACGGAATGAAGGACTGGGTGCAGGTGCTGCGCGCGGCCGACGCGGTTGCGCGCTGGCACGTCCATCAGCGCCGCAAGGGCGCGGCGGCGGAGCCCTACATCAATCACCTCATCGAGGTCGCCATGCTCGTCGCTGACGCGACCGCCGGTGCCGATCTCGACCTCGTCATCGCCGCGCTGCTGCACGATGCCATTGAGGACCAGGAGGTGCCGCGCGACGAGATCGCGGGCGCGTTCGGCGAGGACGTCGCGGGCCTTGTCGATGAGGTCACCGACGACAAGAGCCTCGACAAGGCCGAACGCAAGCGACTCCAGGTCGCCCACGCCGCCACGAAGTCGGCCCGCGCCAAGATGCTGAAGCTGGCGGACAAGACCAGCAACTTGCGCGCCATCGCCTTGAGTCCGCCGCCGGATTGGACGGTGAAGCGACGGCTCGAATACGTCGCCTGGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCCTGCTCAGCGCCCTGATCTCAAAGGGAATGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 1 535-11026 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWPL01000039.1 Blastochloris sulfoviridis strain DSM 729 NODE_39_length_29097_cov_38.5098, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 535 37 94.6 38 TG................................... AAGGGTTCGAAGATCACCTTCAATCTTCGTCCCTCCTT 610 37 100.0 37 ..................................... ACGCGCCTTTGTGGCGGCTAGGCTCGCCAATCTCGGC 684 37 100.0 36 ..................................... ATGGCCTTCACCCACCGACTGCCGCACATATTTCGC 757 37 100.0 37 ..................................... GCGGCGGAGATGGCGGAGGACCAGGGTCCGCCGGCGC 831 37 100.0 37 ..................................... GAGTCAGGCCGACGTCGCGCGCAAGATCGCAGACGGT 905 37 100.0 39 ..................................... GATCGCGAAGAGCCCGAGATACCGTCCGAAGCCCGTGAC 981 37 100.0 37 ..................................... CCCGTTTGCGGGCGTTGACTTAGACGCGACAGAAGAT 1055 37 100.0 38 ..................................... AAGTGACGGGGCCCGGAGACGGGCTCCGGTCGCGGGTC 1130 37 100.0 36 ..................................... GCTCACGGCGGCCGACACCACCAACCGCCTCGCGGT 1203 37 100.0 37 ..................................... CACCCGCATCGAGACGCTCCTGGAGACACTGGTGCGG 1277 37 100.0 38 ..................................... GACCCGAACGATCTTCTCTATGTCCACCCGACCGAGGA 1352 37 100.0 37 ..................................... CAAGCCTGCTGGAGGTGCAGGTGGGCGGAGCGCATTA 1426 37 100.0 37 ..................................... GCTGTGGCCACAGGAATGCCATCCCGGCCTGTCCCTT 1500 37 100.0 37 ..................................... TCGTGAACTTCTTCAACGCCTCGCTGGAGGGTGCCCC 1574 37 100.0 39 ..................................... GCGGCCATGTTCGTTCGTCGCTCCGCGGGGCTGGTCGCC 1650 37 100.0 38 ..................................... ATGTTCGAAGCGTTCCCGGCAGAGACCTACACCCTACG 1725 37 100.0 38 ..................................... GACATCCTCGACGATCCGGCAGTGCCGCTGCACTGGGG 1800 37 100.0 37 ..................................... GAGCTTAAGGGTGGCTACTACCCGATCAAGTATGACG 1874 37 100.0 36 ..................................... CCAGGCCCAAAAACCGGCACCGTGACGTCAGAGTTC 1947 37 100.0 36 ..................................... GCGCCGCGGCTGGTGCGCCAGAGCGCTGACACCACT 2020 37 100.0 36 ..................................... GAGAACATCGGCACGGATGAACGCGCCCAAATGAAC 2093 37 100.0 39 ..................................... CATGACGACAACACAGCATCGGTTTTCGTCTGATCTGAC 2169 37 100.0 39 ..................................... CCAGCCGACCATGTTCACCGGCGTCATGGCGACCCAGTT 2245 37 100.0 37 ..................................... GTGAGGGTGTAAACATGGCCACGGCGCAGGATATCCA 2319 37 100.0 37 ..................................... GCAATGACGAATAATCGATAGGCGGTAAATAGTTGTC 2393 37 100.0 37 ..................................... ACACGCGGTCGATCCACGCGTCTGGCGCGGCCTCGTG 2467 37 100.0 38 ..................................... GTGGCCATCATCCTCACCCGAACAGCGACTGGACGATC 2542 37 100.0 37 ..................................... CTGGTGCCCCGTGAAGCAGTGCCCGCACCACGGGGAG 2616 37 100.0 37 ..................................... AGGCGACGACGGTAAACCCCAAAGACCTCTTCGGGAT 2690 37 100.0 38 ..................................... CCGAAGGGTGGGCGCCGTGGGCCGAGGCTGTATGCGAG 2765 37 100.0 38 ..................................... CTGCTCCTGGGCGAGGCGCATCGCTGCCTGGTCGCCGG 2840 37 100.0 38 ..................................... CCGAAGGGTGGGCGCCGTGGGCCGAGGCTGTATGCGAG 2915 37 100.0 39 ..................................... CTTGGTCGGCGAGAGCGAGGCGCGCGTCCGTACTGCGCT 2991 37 100.0 36 ..................................... CAGGCCTCCGCTCCAGGGTCCAAGCTCGCTGACCGC 3064 37 100.0 36 ..................................... CGTCCGGAGAGGTCTATTTTGGTGGCTCAGAATTGA 3137 37 100.0 39 ..................................... GCCGCGGCCCGAATGAGGTTCCACCGGACGTCGGCCGGC 3213 37 100.0 36 ..................................... GTGCGGGCGTGCTCGGGCAGGTCCGTGGCATCGATC 3286 37 100.0 38 ..................................... GTATGCGGCCACGGACGACTACAAGCTCACCGGCGCAG 3361 37 100.0 39 ..................................... CCCGCGAGGCCGACGTCTCTGCCCGCAACACCTGGTCGC 3437 37 100.0 35 ..................................... GAGGCCGTGGGCGAGAAGATGACCACTGGAGAGGA 3509 37 100.0 38 ..................................... CGCAGTACCCCGGTTAAAATCGACGTTAAAGGTCGATT 3584 37 100.0 35 ..................................... GACCAGTTGGAGCGTCGCAGCAAGAACCTATCAGA 3656 37 100.0 37 ..................................... CAACACAATTAGTAGATATCTTCTGACGCTCGTGAAT 3730 37 100.0 37 ..................................... CTGGTGTTGCTGGAATAGACATCAGTACATCTTTACC 3804 37 100.0 35 ..................................... CACGAAATATTTGATGTCTTCTTTAGTTTGTTTTT 3876 37 100.0 37 ..................................... GTCGTTCTCGAAACGTTCTTATGACTATTGCCCCCTA 3950 37 100.0 37 ..................................... GACCATGTTTTATGCTGAGATTTCAGTGTGTTGGGGT 4024 37 100.0 37 ..................................... TGGTATCGCTGAAATCAATAAGGCGATGGCCGAGACG 4098 37 100.0 36 ..................................... CAACACCGCGGCCAGAATCGACACGTCTGGGGAGTC 4171 37 100.0 36 ..................................... GAAGATCGGATTAGAACCTACTATTTCATCGAACAT 4244 37 100.0 36 ..................................... AGAGACCAATGAGCCGCGGGCTGGTGCACCCGGTTG 4317 37 100.0 35 ..................................... CCGCCGTCAAGCGAGGGTAATATGTCCGGAGAGAT 4389 37 100.0 38 ..................................... ACCGCGCAGGCTCAGCTCGAAGCTCAGCTTACACAAGC 4464 37 100.0 38 ..................................... GTGGGTGATCACATCCTCAATACCCATTCGGTCGAAGG 4539 37 100.0 36 ..................................... ATCGCCCTGGAACCAGGCACCGTCGGTCGAATAGAA 4612 37 100.0 37 ..................................... GGGGACGAAGAGAATGAGGCGAGCGCCCGCTTAGGAC 4686 37 100.0 38 ..................................... CCTGCCAACTTCCGTAAAGCCTTGAACCCTACTGTCTA 4761 37 100.0 38 ..................................... GCGTGGAGTGAGACTGAGGAAGGCTTTGACTACTGGTC 4836 37 100.0 37 ..................................... AACTGATTGAGTTCAAGACCAGTCATTCGTTATATGT 4910 37 100.0 37 ..................................... ACAGCAAAGTATCGGACCGGGTAGTCATGCCGCCGAA 4984 37 100.0 35 ..................................... ATTTTTGTGCGCTGCTGTGTTGCTGCGAGTTGACT 5056 37 100.0 38 ..................................... CCTATGGGCATACTTAGCTAGCGTGTCAGCGAAGGGCT 5131 37 100.0 37 ..................................... GGATGCGCAAGGACGCGGACGGCGCTTGGGAGCTGAG 5205 37 100.0 38 ..................................... CGCTTCGGCGTGCTCGGCGTCCACCTGTGGACCGGGTC 5280 37 100.0 38 ..................................... CCGATGTGGGCGGACTGGCTCCGCCACGCCGCTCGGTG 5355 37 100.0 35 ..................................... TTCGAGTGGCAGAACCTCGAAGCCAAGGCACCGCT 5427 37 100.0 38 ..................................... CGCGGCCCTTTAGCAGTGGTGGCGCGTTGGCGGAGCTC 5502 37 100.0 37 ..................................... CAAGGTGCTCCTGGATTCGCTGGACGGAATCGATGAC 5576 37 100.0 35 ..................................... GTCGATCGACGCAACGCCGATCGCGAGGCAGTCAT 5648 37 100.0 38 ..................................... CTGCTCGGCAAGAATGCGGGAAATGACAACGCCAAGGG 5723 37 100.0 39 ..................................... GCTGCTGGCCGAGGTGGTGCGGGCGGTAGACGAAACCGG 5799 37 100.0 39 ..................................... ACATGATCAGCTACTCGCAGTAGAACACTCGTTGCGGAC 5875 37 100.0 38 ..................................... CGGAACAGCCACACCGCGGGCGAGCGCGTAGCCGAACA 5950 37 100.0 36 ..................................... TCGAGTCACCGCCTCACGCATCGCCGACGTGATGGC 6023 37 100.0 36 ..................................... AGGGCCACGGTGGCCGGTCAGGTCAGGCTTCAACAT 6096 37 100.0 38 ..................................... GCAATTGAGACGCCGGGGTTTTCCGTCGACAAAGATGG 6171 37 100.0 39 ..................................... CCAGCACGAGTTCTACACGAAGGAAACTTCGTTCCGTGG 6247 37 100.0 36 ..................................... TATCAGGAAGCGTAAGGCAGCTACAGTACGTCTAGA 6320 37 100.0 38 ..................................... TTATCGCAAGATCAATCCCATTTCCAGCGCCGCATTGA 6395 37 100.0 39 ..................................... CGGCAGAGTCGGAGGACATCAGTGCACCGTCTGGGTCAC 6471 37 100.0 36 ..................................... GCAGACGGCCCGCCGGCACGTGGCGGGTGCGGGCGG 6544 37 100.0 39 ..................................... GAGCTGGAGAAGAAGGCCGGCGCCGCTCGCAAGACCGAG 6620 37 100.0 36 ..................................... CAATCTCACCCTCAACGGCCTCAACCTGATGGTGCC 6693 37 100.0 39 ..................................... CGGCCAGTTGCTCGACAAGATGATCGACGGCTCTCCGCT 6769 37 100.0 35 ..................................... CCGGCCACATAGGCCAGTGCGTTCGAGCCGCACAG 6841 37 100.0 36 ..................................... CTGTAGACCGCGATAGCGCGGCAGGCGACACCAGAT 6914 37 100.0 37 ..................................... TCCGTAAACGCCTCCATCGTCTGCACCAGTTCCAGCA 6988 37 100.0 36 ..................................... GTAATGCCTAAGCGCAAGATCAAAGGCTTTCAGAAA 7061 37 100.0 36 ..................................... ATCGTGCAGCATGCGACGAATAATCTCGTCTTCCTG 7134 37 100.0 39 ..................................... GGACTAAACCGCATTGAACGCGCTGTGCAGTCAACCATG 7210 37 100.0 38 ..................................... GCTATCGTTCTTCGGAACGTCAAGCTGAGATTTTCAAA 7285 37 100.0 36 ..................................... TCTGTCGATGGATGACATTAACCGCTCGTATGAAGG 7358 37 100.0 38 ..................................... GCTTCGGAGGTGATCGACGAAATTATTGATCCGCCCGC 7433 37 100.0 35 ..................................... GTTGAGCAGCTACGCATTAGCGATCCTGTCGCAGC 7505 37 100.0 37 ..................................... TCTGTATGCGGAGGGTCGGTGTTCATCCTTAACTGGC 7579 37 100.0 36 ..................................... TTAACTTCTCCTACTCCAGCAACACCACCTTACCAT 7652 37 100.0 37 ..................................... GTATTGATCTGTGAGTAAGATGCACATTAATCCCTAC 7726 37 100.0 37 ..................................... ACAACGGCGGCTACAGGACGTCGATCGACTGCGAAAC 7800 37 100.0 37 ..................................... CCGCGGCATGAAGCCGCGTGGAAAGAGCTGAAAAAGA 7874 37 100.0 35 ..................................... GTAGGGTCGGGGCTGGCTGTGGACCCGACGCTGCC 7946 37 100.0 38 ..................................... CGACATCTTCCGCGCCACTTACGAACCGGTGGAGGACT 8021 37 100.0 35 ..................................... CAAACGGCTTTGTGTGCATTGACGTGCACAGATAA 8093 37 100.0 39 ..................................... GGCGCGACAGACCTGCTCTATCGCATCCGCGATGACGGT 8169 37 100.0 38 ..................................... CCCGCAGCGGAATATCGAGCGAGCGATTGCGCGCCCGA 8244 37 100.0 37 ..................................... GTTTTCGTTTACGCCGGCAAGCATTCCCGTACGGGGA 8318 37 100.0 37 ..................................... GCGCGAGGATCGACCGCGACCGGAACTATCAGGCGGA 8392 37 100.0 35 ..................................... AAGGTAAGCAAAGCCATTGCAAGGCGCACGGGTGA 8464 37 100.0 37 ..................................... TTGTGGCTGACCTGATGCAAAAGCCGGGCGTCATCAT 8538 37 100.0 36 ..................................... GGCGCTGGCGGAGAGAGACAGAGCGCGCCGCGAAGC 8611 37 100.0 37 ..................................... CAAGCCCGCGCTCAGGAAGATCGTGCAGCGCATCCTG 8685 37 100.0 38 ..................................... CTGTCCATTACGGCGCCAGTGTTGTCGCAATTTGTAGC 8760 37 100.0 38 ..................................... AGTATGACCATTAGTAATTTAGTGGAAACACAAGACAA 8835 37 100.0 36 ..................................... GCAGACAGCATGGCACGCCGCATCCGCGATGACGGT 8908 37 100.0 37 ..................................... CGAGACTATCGTGGCCATGTTGGAGGACATTAGTAGT 8982 37 100.0 38 ..................................... CAAGTCAGCCCCCGCAGCTCGGAGGCGCGCATTCCAGT 9057 37 100.0 38 ..................................... GAAGCCTACGTGACCGGAGCGCTGTCGCGGATTTTCAT 9132 37 100.0 38 ..................................... GGCGCTGGTCGATCCGTCGTGGTGCCGTCGCTAACGAC 9207 37 100.0 37 ..................................... GTGAGGTGATGATCAAGCAGGCCGAGCTGGAGCAGAC 9281 37 100.0 37 ..................................... ATCCTCGTAAAGGGTGGGACGCGCATACATGGCTGCA 9355 37 100.0 38 ..................................... GCGCCTTGGGCTGGAGCGCGACAACCTCAGTCTGCTGC 9430 37 100.0 40 ..................................... CTCGTGACGGTTCCAATAGTGAGGGAGCCAGTCACGCGAG 9507 37 100.0 37 ..................................... GCGTCGGCTAGGGTCGGGCGGGTGTCACGCGGTTCTA 9581 37 100.0 35 ..................................... CGGTTTGGTGCAGATGGTGCGGCGCCGGCAAAGAG 9653 37 100.0 36 ..................................... CGAATCAAAGTGGACTCGGTTCATCGGTGGTAAGGT 9726 37 100.0 37 ..................................... GCGTTTAGGGTCTGGCCCAGGTTGCCCTACCTGCAAC 9800 37 100.0 35 ..................................... AAGGATCCGTCCGCCGCCATCCGCAACGTCGCCCC 9872 37 100.0 36 ..................................... AACGATACCGCGCCGTTTCAGGCGCACTACGTCACC 9945 37 100.0 37 ..................................... CGAGGTGGTGGCGGGCGGTGTGCAGGACGTCCTCGCT 10019 37 100.0 39 ..................................... GTCGGGGCTCGCAGGTCTTACCGCCCTCCTTGCCCCATA 10095 37 100.0 38 ..................................... CCGGCGAAGGTGACAACGGATCCGGCGACGGCGCTGGT 10170 37 100.0 36 ..................................... AGGGAAGCTCTGATGTGAGCCTCCCCCTGAGTTTAA 10243 37 100.0 37 ..................................... CGGTATTGTTTGCGTCTTAAAGGCTCGACGCTAAGGG 10317 37 100.0 38 ..................................... GATCGCGAAATGAGCGCCGACAGCCATACCGAAAAGCT 10392 37 100.0 38 ..................................... CTGGCCCGCCGCCGCCATTCCCTCCACAGGTCGCGGAG 10467 37 100.0 37 ..................................... GTATGCTTGGCAGTCTCGTCAAATCCTCTGCAGAAAT 10541 37 100.0 39 ..................................... CGAGCAGCGGCAGATCGGTCTGCGGGTCTGGCGTCAGGG 10617 37 100.0 36 ..................................... CTTGCCGCGCACATAGGCATAGACGTTGTTGGTGCC 10690 37 100.0 38 ..................................... CCGTGCCGATCCGCGGCCCGGTGCCGGTGCATTGCGAG 10765 37 100.0 39 ..................................... GGCCCGGCGAGGGGCCAACGTAGGCGTGCCGGAAACGGC 10841 37 100.0 37 ..................................... CGGCCATTGCGGACAGCAGATCGACCGGCGCCGTGTC 10915 37 100.0 38 ..................................... GGTGGACGGCGGACAAAGTCCACAGCCTCGCCGATTTC 10990 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 142 37 100.0 37 GCTTCAATGAGGCCCGAGCGTGAAGCTCGGGAGAGGC # Left flank : AGCAGAAAGCCAATGGTTTCAAGGACACCGCGATCAGCCGCCATCACAGCGTCGATGGCGATCACGGCCGCATCGAGACCCGCACCACCACGGTGATGCACGACGTGGCTTGGCTGAAAGACCGTCACGACTGGCCCGGCCTGACCAGTGTCGTCATGGTCGAAAGCATGCGCGAGATCGGCGCCAAGTGCGAGCAGGAGACCCGCTTCTACATCGCCTCGCTGGCGTCCCCGGCCGACCAGCTCGGACCCGTCATCCGCAGCCATTGGGCGGTGGAGAACAGCCTGCATTGGATCATGGACATGGTGTTCCGCGATGACGACTGCCGCGTCCGCACCGATCACGCCCCCGCCAATTTCACCACCCTCAAGCACATGGCCATCAACCTCATCCGCAAGGCCCCGGGCAAGGATTCACTCCGCCTCAAGCGAAAAGTCGCCGCCTGGGACGACGACTTCCTCGCAAGCCTCCTGGCAGCGTGATTTTTCACCCGATTGCCC # Right flank : CCCCCCCTGCCCTTTCCGGAGATCTGGCCGGGGCTTGCGACGCGTTCTGCGAGCGGTTCCGCCGGCACGCTTCACCGAACGGTGCAGAAGCATGGCGCAAACCCTTCACGATGTCAAACATCTTCGTCGTTTCAGAGGCTTGCGCCGCTGCGAGCGGTGCCGCGGAAATCCGCATCACCGAACCGCTCGCAAGACTAGCGCATCCGGGCCCGGCGATCACCTTCTCCGACGCTGGGACCGGCCGCCTAGAGCGTGATCCGATCTGACTGCATCAGATCAGACGCTCTAAGTTTCTGGTTTGTCGCATTTTCTTTCGCGCAACCGGTATCCACTTGTGCGGAAAATGCTCTAGCTCGCCAGGGCACAGTGACGCCCTACATCGCGCGCCACCTGCGCCCCCTCCCCGACACGCCGCGGCACGGGACAGCGTGCGACGAGGTTCCGCCGTGTCCGGAAGATCGCGGCGTCCCGAGGGGCGCTGTTTCAATGAGGCCCGAGCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCCGAGCGTGAAGCTCGGGAGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.80,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA // Array 1 6596-89 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWPL01000058.1 Blastochloris sulfoviridis strain DSM 729 NODE_58_length_6711_cov_39.3998, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 6595 37 100.0 39 ..................................... AGGTGCATCTTAAAAATTAGTCGCACGGGAGGTGGCTGC 6519 37 100.0 37 ..................................... GAAGGGCGAGCTTCAGCCGGCGCGCGTGACGGTCGTT 6445 37 100.0 37 ..................................... CGGACTTGCGTGACGGTTTTCTCGCCGCCGTCAGCGC 6371 37 100.0 37 ..................................... ATGTCTGCGCCGCCTGCGCGTGGTTCTATGGCGATCC 6297 37 97.3 36 ....................................G AAGCCGGCGCCCTCGGCGCAGGTCGACGGCATCGAG 6224 37 100.0 38 ..................................... TGGTTGGCCTGGGCCTCGACCTCGAAATTGGTCGGCAT 6149 37 100.0 37 ..................................... CCTTTGCCGTCGCGCCGCGAAGTACGCACGCGACCGC 6075 37 100.0 37 ..................................... GTCGATGACCCGTAAGGGTAAGACTCTGACACGTTTC 6001 37 100.0 37 ..................................... AGGGCGCCTGGCGTGCCAAGCATGGTCAGCGCCACCG 5927 37 100.0 36 ..................................... GGTTCGCGCAATCCGCGAGGCGAATGGCGTGGCTGT 5854 37 100.0 36 ..................................... GACGAAGTTCGGCCGGGTCTTCGTACCCGTCCAAGT 5781 37 100.0 37 ..................................... ATTTTCTCAATGGCACGTCGGGCCGCTGGAGTCCAAT 5707 37 100.0 37 ..................................... GCGAAAAGCCCATGTATTTCCCGACATGGTCGTTCTT 5633 37 100.0 38 ..................................... CGGGCCGAACGCAGGCTCGGCGAGCTGATCCTGCAGGC 5558 37 100.0 38 ..................................... AAGGAGGGCGAGGCGGACCACAATTGGTCGGATCGCTT 5483 37 100.0 37 ..................................... GTGGATGCGTCGGGTCTGAGCACGCGAAGTTTCCCGG 5409 37 100.0 39 ..................................... CGGCTCGGCCATCCGCTGGCCGGCGCGGACCCATGCGCC 5333 37 100.0 38 ..................................... CAGTGGTGATGGTACTACTCATGTCTACGCGCAGCATC 5258 37 100.0 41 ..................................... TTCCAGCGCAGGAAGGCGAACACCTCCGTCTCCATCTCGCC 5180 37 100.0 36 ..................................... GCAGCGTCACCACCACCACGCCGCGGCCACGCGTCT 5107 37 100.0 38 ..................................... GTCCAGGCGTTTCCGTCGATCGCAAGACGGTCAATCGA 5032 37 100.0 36 ..................................... AGATCGACGAGGCCCTCGGATGACCATCCCCGGCCC 4959 37 100.0 36 ..................................... AATCGGGTCGAGCGTGTATGTCTTGTGGGCCTGGAA 4886 37 100.0 36 ..................................... GCCGCTGACGATGGTGTGCGGTGCGCCGGGCGCGGG 4813 37 100.0 36 ..................................... CCCCGTAGGAGGGGGCAAGCCATGACAACACCCAAA 4740 37 100.0 37 ..................................... CGCGTCCGGTGTGTGGGATGCGATCACGGGCGCATGG 4666 37 100.0 36 ..................................... ATCTAGACCTCGTTGTAGGAGGGTAAGTGAGTTGTT 4593 37 100.0 37 ..................................... CGCCGTTCGAGGTCGGGCGCCCCTCCCGGTTCTGGGT 4519 37 100.0 42 ..................................... CGCGTCCGGCGCTGTGCCAGGGGCGAATCCAGCCTTCGAACC 4440 37 100.0 40 ..................................... ATGTCGGCCCCGGGTGGGTCTATGTCGAGCCCGCGTGGTC 4363 37 100.0 35 ..................................... CATCCTGAGGTGTCATCGTGCAACACGGCATTTGC 4291 37 100.0 37 ..................................... GCCGGAGGGCGATCGGCTACCGTTCCTGGCTCACGCG 4217 37 100.0 38 ..................................... CTCCGCGCGAGCCTGCGTCAGAGCCGCAACGGTGGTGT 4142 37 100.0 38 ..................................... ATCGGTGGATGCGAGGGCGCGAGAATGCTGGTTCGCCT 4067 37 100.0 35 ..................................... TATATACGACTGACTTTCCCCGAATTGAAACGGGA 3995 37 100.0 38 ..................................... GACGCGATCGCGCCCAATCCCACAGCGATCACCCCCCG 3920 37 100.0 39 ..................................... GAACGCCGACCAGTCCTTGAGCACGAAGCTCTGCAGCAT 3844 37 100.0 39 ..................................... CTTTGGGGGCGGCCTCGCCGACGGTTCGGTAACCGCCGA 3768 37 100.0 37 ..................................... CGGCGCAACTTTGTTGCCGAAGATACCGGGAATGGTC 3694 37 100.0 35 ..................................... TGGCCTTTGCGTACCGACTGCCGGCGATCTTTCGC 3622 37 100.0 37 ..................................... CGAGTCGGCCCGAGCATGGCACGGAATGTTCTCAGCA 3548 37 100.0 36 ..................................... CATCGCGCCGGGAAGCAGCTTGGCGTCGATGGTGTC 3475 37 100.0 36 ..................................... CCGTCAGATTAAAGCCGCCCAAGTTGGGAAGGACAA 3402 37 100.0 38 ..................................... GCCGAGCGCACCGCCCGCGCCATCGCCGAGCTGCGCGC 3327 37 100.0 38 ..................................... CCTGGCTCAAACACAAACTCTTGGTTCTTATACAGAAG 3252 37 100.0 37 ..................................... CAGGCGCCGCGCCGTCCTATGCGGCGCGTGCCTGGGC 3178 37 100.0 38 ..................................... ACACTGAATACGTCGCGGCCATCGAGCCGCATGTACAG 3103 37 100.0 38 ..................................... CAGGTGTCCGGCCTCACGCAAAGCATTGTCGTGGTCGG 3028 37 100.0 37 ..................................... CGCCCCGACGCTCAGCCCTTACGACTTGGCGCGCGAC 2954 37 100.0 37 ..................................... GCGGCCCGAGCATCTGGAGCCCGACCGTCGCGCCACC 2880 37 100.0 38 ..................................... GCCGCCGTCACCGCCATTCTCGGCGCCGGCGGCGCGCT 2805 37 100.0 37 ..................................... CAATCGAATGCGTTTCCGGACCGCCCGCGCCATTATT 2731 37 100.0 38 ..................................... CAGATAGACCCCACACGAAATCTAGGGATTTGTCAGCC 2656 37 100.0 36 ..................................... GGGTGAAGGACAACGGGCGGGTCTACGTGCCGACCA 2583 37 100.0 39 ..................................... GGCGAGGGACGACGCTACGATCCACGCTCCACCTGAGGC 2507 37 100.0 38 ..................................... GAAGGGGGAAGCGAATCTTCCATATAGGCCTCTTGGTT 2432 37 100.0 37 ..................................... GGCGGCGGATACGTCGGTGCCCACGTGCATCCGAGGT 2358 37 100.0 37 ..................................... CCGACGCCGCCGCCTGGGCCGAGCGCCTCAAGCGCGA 2284 37 100.0 37 ..................................... CGAATCGGTGATGGGTTGACCTGCAATGATACTATTG 2210 37 100.0 38 ..................................... CTGTTGTCCCCTTTAGGTATTGGGCAGACAAACATTAC 2135 37 100.0 39 ..................................... CAGGCGGGACCGGGGTACTCCGGGATTTCGGCAGTAGGT 2059 37 100.0 36 ..................................... CGTCTCGCCGGACTGGAAGACACGCGTGCCGTGGTG 1986 37 100.0 38 ..................................... CCGGACTTCGTCCTTCCCAACGGCATCATCGTGGAAAC 1911 37 100.0 36 ..................................... CTGATCGCTGGACGACATGAATGCCGTGTCGCTCTC 1838 37 100.0 37 ..................................... GGCAGAGCGCATCAGCGCGCGTGGTGATGACAGCGCC 1764 37 100.0 41 ..................................... CCGTCCGCAAGACGGGCGTAGGAGCCGCGATCATCGGTGAG 1686 37 100.0 38 ..................................... GTGGAGATCATACTACAATGTAGTATCGCCGCAACCGG 1611 37 100.0 36 ..................................... CGTAGACCTTCTTGATAATCCGACCCGAGGTATCGG 1538 37 100.0 36 ..................................... GACGGACATGGGTCAGGTTCCGATCGCGATCCAGGA 1465 37 100.0 37 ..................................... ATCTGCGCAACGGTTGTTGCGGCTTCAACATTGAGCA 1391 37 100.0 38 ..................................... AGGTGGAAAACGGTCGGCGGCTTTTAATGGCGTGTAGT 1316 37 100.0 37 ..................................... CTTTCCGGCGGATTTTCTTGCACTTACTGCACATCAA 1242 37 100.0 38 ..................................... GCATCAGACGGCACCGGATCGATGTCGAGCGCCGCGAA 1167 37 100.0 39 ..................................... CGCATGGTGCAGAGTCCTTTCCAAAACGCCAAAGACGGT 1091 37 100.0 37 ..................................... CAGATGGCGAAAGCCTCTGCCGGGGGGAGGCGCACCC 1017 37 100.0 37 ..................................... AGGCCGTGGAGGAACTGTCGGCCGGCGTCGAGATGGC 943 37 100.0 38 ..................................... TCTTCGACCAAGACCGTTTCCCGCCGCACCCGTTCCAC 868 37 100.0 36 ..................................... GTTCCTTAGCCCACCATTGAATAGCTAGCTTCCAAT 795 37 100.0 40 ..................................... CTTCTGTGGTTGAAATAACGCGTCCACCTGAGGCAGACGT 718 37 100.0 37 ..................................... TTACCTTTATTGTAGAAAACAGTGAATCTCTTCTAGG 644 37 100.0 38 ..................................... GCGCATCATCATCGGCCGCCCGGACGAAACGCCGCTGC 569 37 100.0 36 ..................................... ACGCGACGCCCACTGGCAGGCCGAGATCGAGCGGTC 496 37 100.0 37 ..................................... AGCCCGTCGCCGAAATACTCACCTCAGAGCGGTAGTT 422 37 100.0 37 ..................................... ATTTGGTGTTCCGCATGGCCTCGGGCCTGGTGAAGGT 348 37 100.0 38 ..................................... CTTCTAAACGTCAAGGTATACAACAAACCTGAGATAGT 273 37 100.0 38 ..................................... ATCGAGGACGCGGGCCGCAACTCCTACCACTTCCCCGA 198 37 97.3 37 .............................A....... AATTAAATCAGAAATCATCAAAATAGCACAGAGTAAA 124 36 67.6 0 .............AG.-...ATCG.G.GAA..A.... | ========== ====== ====== ====== ===================================== ========================================== ================== 88 37 99.6 37 GCTTCAATGAGGCCCGAGCGTGAAGCTCGGGAGAGGC # Left flank : CCGACGGGTGCGAGGTCGTTGCCACGTCGTCCACCAACGCCGCCTGATCGCCCGTCACCCACATTCCGGCATAGCTCGGCGGTCTCATCCGTCGAGCGCTGCGCCTTGGTCAGCG # Right flank : CGTGACAAGGGTCTGAAGTGCTGAATCTGTCGGTTCCTTCGATTCGGATGCGGAGGATGGGCGATGGAGCCAGCGGAACCGGACTTTGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCCGAGCGTGAAGCTCGGGAGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.10,-14.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //