Array 1 211494-211888 **** Predicted by CRISPRDetect 2.4 *** >NZ_FCGE01000003.1 Serratia marcescens strain 2880STDY5683025, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 211494 29 100.0 32 ............................. CGATGTTTAGCCGCAAGCAGGCCACCGACGAT 211555 29 100.0 32 ............................. GTGAGATAAAAACGCCGGTAGTTAACGCGGTC 211616 29 100.0 32 ............................. TGAACATGATTTCTTCTCCTGGGTCTTCGGGT 211677 29 96.6 32 ............................A CCCGCCGGGCATCGCTTTGTCTGAAATAAGGA 211738 29 100.0 32 ............................. CGCCTGCATCCGCCGCCACAACTGAGTTTTTG 211799 29 100.0 32 ............................. TACGACCTGACCGGGGGCGATTTTGCCCCTAA 211860 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.5 32 GTGTTCCCCGCGAGAGCGGGGATAAACCG # Left flank : AGCTGGTGACCGAGTGCCTGCGCAGCGTCGAGATGATCTACCTGACGCTGGCGTTCATCACCACGCCGATCTTCTACCTGTCCGGCACCATCTGGCCGCTGCAGTCGATGCCGGCCTGGGTGCGCGCCATCTCGTACAGCATTCCCTCCACCTGGGGCACCAAGGCGATCGCCGGCGTCAACCAGATGGGGCTGTCGCTGAACGAAGTGTGGGGTGACGTGATGATGATGCTGGTGCTCGGCGTGGTCTACACCCTGCTGGGCTTCGGCGTCGGCTTCTTGCGCAACAGCGTGGCGCTGCGCGGGATGTTCAGGAAGCGACGGGCGTAGGGGGGAGTATCTTGTTGTTATAGCGTGAAAATTCGGTGATTCTGCTTTATTGCTATAGATGGTTTTTTTATTTATTAGATTTCAAAGAGTTATGTGACTGCCCCGATGCTTAAATCGCGGTGAAATCTCGTAGATGTTGAAATCCATTTAATTCAATTAGATATATTTATA # Right flank : GGGCGCGACAACGAAGCCTACCGCGGTATTAGCGTGTTCCTTACGCAAGTGTGGGGAAGTAAACGCATCAAGAGATATAATAATTCAAATGAAATAATACCATGCTAATTATATTAAGTAGTATAAGGAGTTTTTGTCTTATTTAAGAAGCTATATGAAATTTAAATTAATATCATTGCGCTTTGATTTTACTGTTGTGAGCTTAATTGGCTTTTTGTGTTTTCGAATAAAATATAAGTACCTTTAGCCTGATGGAAGTGCTAAAGATAACAAGGCATTATTTATATCTAAACGGGATTGTTTATGGGAAGTGATATCCCTGACTATATGCGCTACTGGGGAAAAGCAAAAAGAGCTGACTTACCCGGAGAGAGTGACGATTACCACCTATTAGCTTATCACTGCCTGGATGTTGCTGCTTGCGGGTACCAGATGGTGATTGATAATCGTTTTCATGCCGCCGATATTCTGGCAGAGATAGGCTTCTCTCGTGCCGATGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 57393-53594 **** Predicted by CRISPRDetect 2.4 *** >NZ_FCGE01000027.1 Serratia marcescens strain 2880STDY5683025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 57392 29 100.0 33 ............................. GGATAGCGGCCGATATCGTAATCCACCATGCTG 57330 29 100.0 32 ............................. CAACAAGCGGCGACGATCTCTAGCCAGAATGC 57269 29 100.0 32 ............................. GTTGAAACAACCATCTAATTGAAGTGAAGGTC 57208 29 100.0 32 ............................. AGAACGATGCAGAGTTCGCGCTCAAGAACGCC 57147 29 100.0 32 ............................. TCCGCAGCCATCGACAGTTGATGGTTATCGAT 57086 29 100.0 32 ............................. GATGATGCCTACAGCAACATAGCGCAGTTTTA 57025 29 100.0 32 ............................. GTTGGGCGGCGTGTCCGCGCAGTATTTACTGT 56964 29 100.0 32 ............................. CCTCACGGGGCATTCTTTAACCGGGATTACGC 56903 29 100.0 32 ............................. AGGTGAGCGGCCGCGTTGATTGGAACTCATTC 56842 29 100.0 33 ............................. TCATGCGGCTACGCGCGGCGGCCGCGTGTTTGC 56780 29 100.0 32 ............................. CGCAACGTGCGCAACCAGCAGCAGCCGGACGG 56719 29 100.0 33 ............................. GTTAATCTTGTCGAACCCTTGCGCGATGACATC 56657 29 100.0 32 ............................. TTCGACCAGCACCAGCCGCAGGACGTGGACAC 56596 29 100.0 32 ............................. CGGCCATGCTGTTACGCTCCCAGCTTAACGCC 56535 29 100.0 32 ............................. TCGCTGTCTAACGTGCCGCTGGATGGCGTGCT 56474 29 100.0 32 ............................. GTTGCCGAGCAGCTGGCCAGCATTGCGATCGA 56413 29 100.0 32 ............................. CCTTTACGATGTCGGCTTTCGATAAATTAGCG 56352 29 100.0 32 ............................. GAAATTGCCTTGTTCCTCGGCGCGTAGGCGGC 56291 29 100.0 32 ............................. GTATCTTTGCCGAACCTACCCTGCAAAAGTCG 56230 29 100.0 32 ............................. CATACTATGGGCCACTCGTTCGAAATGTCCGA 56169 29 100.0 32 ............................. CGGTCAATAAAAAAGAGGTCCGGCCGCTGACC 56108 29 100.0 32 ............................. CCCAGGTCTCCGCAAATACGTTATCCAGCCAG 56047 29 100.0 33 ............................. GTTTCCCCGTTCTGCGGGTAGATATTCACCTGC 55985 29 100.0 33 ............................. TTCGTGAGGGCGATCATGACGACCGCTGATTAC 55923 29 100.0 32 ............................. CTCCTGACGTTCTGCGTACTGGTGTTAGAAAA 55862 29 96.6 33 ............................A GCCGCAACGGCCGGCCGCTCACTGAAGCCGTAG 55800 29 100.0 32 ............................. CAAACTTTGTTAATTAGCCAGTGCTGCGACAG 55739 29 100.0 32 ............................. GATGGAAAATGGCGGCCAGTTGAACCCGGCGC 55678 29 100.0 32 ............................. GCCGAAGAAACGACGGCGGCGGGGATTGTGGC 55617 29 100.0 32 ............................. CCATCGACAAGCGCGCCGCGCAGCTACCAGAC 55556 29 100.0 32 ............................. CCGGGCTATTACGTCCAGCCATATATCAACGT 55495 29 100.0 32 ............................. CGAAACACCGCCGCAAATGACCAGCGAGGGGC 55434 29 100.0 32 ............................. GGCGAAATGTCCACGCCAACAACGAACCCGCG 55373 29 100.0 32 ............................. CGTCTGAACATCGTGATTTGCCTGGGTGAGAG 55312 29 100.0 32 ............................. GGTAAAAAAGTCCACCCGCGCAGTGTTGCGGC 55251 29 100.0 32 ............................. TGGGTGGATGACGTGGCGGCCGGTGAGATTGG 55190 29 100.0 32 ............................. ATGTTCGCATTGAGGTGTTCGACGGCCAGAAT 55129 29 100.0 32 ............................. TCGTTATCCGGATCGCCCATGTTGCACTTGAC 55068 29 100.0 32 ............................. TTGATGGATGTTGCATCGGGCGCTTTGGAGGA 55007 29 100.0 32 ............................. GCACGATTATCGCGCTATTACGGGCTGTTACA 54946 29 100.0 32 ............................. TTGAGCCAGCATTGCGGAGTTGGCTTGCAACT 54885 29 100.0 32 ............................. CTCACGTTAAAAACCGAGGATTACCAGGGGGC 54824 29 100.0 32 ............................. CGGCGACGTTATCAGGTGCGGCTGGCGCAGGC 54763 29 100.0 32 ............................. CTGGCGTTTCACATGACAGGCCGCGTGATGGT 54702 29 100.0 32 ............................. GAGGAAGAAGACGACGAAGCAGCCTTTACCGC 54641 29 96.6 32 A............................ CAATCGCAAGTGTCATCTGGCGAAAAGTCTAC 54580 29 100.0 32 ............................. GCCGGAGGATTCTCTTTGCTTCCAGGAAGTAC 54519 29 96.6 32 ............T................ GCCGCCAATTCTTTTTGCGTCAGGCCGAGTTG 54458 29 100.0 32 ............................. CGATCAGCGCCGGTGATGTTGACTACTACGAG 54397 29 100.0 32 ............................. AGGTGTTCGGGCCGACAGACAACTGGCAGCGC 54336 29 100.0 32 ............................. CGATTATGAGACCCTTGATAGGGCTATATAAA 54275 29 100.0 32 ............................. GTGTCACGCTGTACAACCCGCGCACCATCGAA 54214 29 79.3 12 .................ACC.T.G....C CATACGCGGCAA A [54193] Deletion [54174] 54172 29 100.0 32 ............................. TCCACGGCCAGGCGCTGGGTGTGCAGGCTGTT 54111 29 100.0 32 ............................. TCATAGGGCAGCATCTCCCCGCCTGCCGTACA 54050 29 100.0 33 ............................. GCAGGGGTGGATGATGGCGTTGCAGTCCTCCTC 53988 29 100.0 32 ............................. CCCATGGTCACGAACTCGGCCGCGATGCCATT 53927 29 100.0 32 ............................. AATTTATCCGGTCGATGCCGCCGGATGCGCGA 53866 29 100.0 32 ............................. GCGTCGTCAGGCTGACGAAAGATGGGCAGCGA 53805 29 100.0 32 ............................. TAGATCGCATTGCATCCGGCGTTATGACAATA 53744 29 100.0 32 ............................. CTGGCTACGCCGGTGCGGTTGCCGCCGGTTCA 53683 29 100.0 32 ............................. TTGATAAGATCGCTGTTGATATCGCACAGCAG 53622 29 82.8 0 ............T.........GG...AA | ========== ====== ====== ====== ============================= ================================= ================== 63 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ACGCCGCGTTCAGCCCGGTAGACGTGGCCGGCGAAGACCGACAATGGGTGGCGCTGGCGCCGCTGGCGGTAGACGAAAGCCTGCGCCGCCAGGGGCTGGCTGAAAAGCTGGTTTACGAAGGCTTGGATTCGCTGAACGAATTCAGCTACGCCGCGGTGGTGGTGCTGGGCGATCCTGTTTACTACGGCCGCTTCGGTTTTAAACCGGCCGCCGCCTATGGCCTGCATTGTCGCTGGCCGGATACGGAAAGCGCGTTCCAGGTCTACCCGCTGGCGGAAGACGCCCTGAATGGCGTCAGCGGCGAAGTGGCTTTTTCGGCGCCGTTTAATCGCTTTTAACTTGTTGATAATTAATTTTAATTTGGTGGAAAAGGATTTCACCGAAGTGTATTTTAAAATTTGATTATAAATCAAATGGTTGTGTTTTTTCAGAAGGCGAAAATATTTGGTAGGATTTAAGGTCTTTAAAAATACATTTTAATTCAACCATATACTCTAAGA # Right flank : TTGAACGCTCGCAATCACATAGGCAGCTTTGAAATGCAGGGGGAGGAAAAAACCACGTAATGAAATCTGTTAACCAGGAAGCAAATACGCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAACGCTAGCGTCAGCTCCCCTTTACCGCGCAGCGCCTTGGCGCCTTTGCCGGCTTGATGTTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAAACGCAGCATATAGAGGTGCCAGTGGGGCAAGTCCATCATTGGGGTCCTGTGCAAGGGTAGAAACGACATCAGGCCGCCATAGCCAAGCGCGGTATCTCTATTTTGTCACGATTTAACGATGGATTTCACCACTGGCGGAACGGTTTGTTTATTCTGTCTTGACGATAAAGGGTTATTTTACA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 62661-60797 **** Predicted by CRISPRDetect 2.4 *** >NZ_FCGE01000027.1 Serratia marcescens strain 2880STDY5683025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 62660 29 100.0 32 ............................. GAGGCAATCGAAAACGGCGTGGAAGTCAAAGG 62599 29 100.0 32 ............................. CGTATTTCTTGGGCTTGAGCTGATGATATTTT 62538 29 100.0 32 ............................. GTGCAGGAGCTGAATGACAAGCGCAAACGCCA 62477 29 100.0 33 ............................. GTCAACGGCGTTGACCGGCTGGCCGAGCATCGC 62415 29 100.0 32 ............................. TAATAACGCCGCAGCGTTAGCGCTTGTTCAAT 62354 29 100.0 32 ............................. GGCCGGTGGAAATGCCGCAGGGCGCGACGATC 62293 29 100.0 32 ............................. GGCACATTGCCCATATCGCGCACGGTCGAGCG 62232 29 100.0 32 ............................. AAATGCTGCTCTATCTCGCCCGGGGATGGCTC 62171 29 100.0 32 ............................. GTCGAGAACTACGCCGAGCCGGTGCCGATTGA 62110 29 100.0 32 ............................. GGGCAATAATTTCTAACCCAATTCTGGGTAGC 62049 29 100.0 33 ............................. GATGCATGGGGCGCTCAAATCGGCGCTCTCCGC 61987 29 100.0 32 ............................. GTGGGTTAATCGTCTAAATAGGATTTGATGAT 61926 29 100.0 32 ............................. GTATGGTTCCGCTGATCATCCAGGTGCCAATC 61865 29 100.0 32 ............................. CCGACGCCGACACGCCTGTTTACCGATATTGA 61804 29 100.0 34 ............................. CTTACTACCGCCACTCATAATGCCCCCGTCATAC 61741 29 100.0 32 ............................. CTTTTCAAGCACCGCCGGCGAATGCAGGTCGA 61680 29 100.0 32 ............................. CCCTTCGCCGAGGGGCTTCGATAATGACAACC 61619 29 100.0 32 ............................. GGATCGCCGGCACGCATTGCAAGACCGAATTT 61558 29 100.0 32 ............................. GCATTGCAGCCAGCGGATTTCTGATTTCGTCG 61497 29 100.0 32 ............................. AGTACAACCGTAATCAGCTGCTTCTCTCTGGT 61436 29 100.0 32 ............................. TTTCTGGACCATAAATTTTAGCGGGATGTATC 61375 29 100.0 32 ............................. AATACTCGATTTTTTCCCCTGCTGTTCCCCGC 61314 29 100.0 32 ............................. GGAATGCCTCACTAAAGGACGTGCCGGCAGAG 61253 29 100.0 32 ............................. GCGTGAACGTCAAAGACAGCGCAGGACGTCTA 61192 29 100.0 32 ............................. CATCGACGATTTAGTTTCTATCGCCACTGCCA 61131 29 100.0 32 ............................. CGCCCCAGATTGAGGGGTTGTAGTTTGAGCCG 61070 29 100.0 32 ............................. GCCGCCTGCACTTTGTCAAATCGCGCCTTGCC 61009 29 100.0 32 ............................. AGAAATGATTACTGTTACAGCCTGGGCGGAAC 60948 29 100.0 32 ............................. TCCGTTAGGTCGATATGCTTGCAGCTGAAGTC 60887 29 96.6 32 ............C................ ATTATGTCCAGAAGTGGTTAGAGGAACAGGGA 60826 29 82.8 0 ............C............CGAT | C [60801] ========== ====== ====== ====== ============================= ================================== ================== 31 29 99.3 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : TTGATTGAGGAGATTCTGGCTGCGGGGGAAATCGAACTCCCTAAACCTTTTGAAGATGCGCAGCCCCCTGCGATTCCTGAACCTGTTTCGTTAGGGGATGCGGGTCACAGGAGCCGTAACTGATGGGCATGCTGGTTGTCGTGACGGAAAACATCCCTCCCCGGCTACGAGGCCGGTTGGCCGTGTGGCTATTGGAGGTTCGGGCGGGGGTGTATGTCGGTAATACCTCGCGTAAAGTCCGTGAAATGATCTGGCATCAGGTTACTGCCTTGGCGGGGGAAGGTAATGCCGTTATGGCTTGGGCGATGAATAACGAGTCCGGTTTTGATTTTCAAACATGGGGAGAAAACCGACGTGAGCCGGTAGATCTCGATGGGTTAAGGCTGGTCTCTTTCTTCCCCATTGAAAATCAGTAAGTTATCGATCTTTAAAAATATGGAAAAGTTGGTGGAATTTTAGAGGCTTAAAAACTCAAGTTATAACAATTAGTTAATCTTAGA # Right flank : TTTTATTGGACTATGTGCCAAAACAATCATTCATCAGTGGCTAAATACCGGCGGCATTTAAAAGTAAAACGCTCTCATATCACCCCACCAACTCCAGCCCCGCCACGCGGCGCCAGTAGCCGTTGCAGTCGGCGTGGTCGGTCAAGGCCAGCGGCTGCTCGCCGCGTTCGTTGGCGCGGAAGGCATCGATTTGCGCCAGTGTCTCGGCACCCTGCGGCGACAGCCGCACGATGTCCACCAGTCCCTGCATGCTCGGGAGCTCGTTGCCGAGGTTGTAGCAGTAGCCGCTCATGGTCTGGATGCCGTTGAGCACGAACACCTGCTGCTGTTCCTGCGAGCGCATCATGCGGCCCTGCGGATACTTGATGCAGCAGGTTTCGCATTCGTCCTTGCCGCGGTTTTCCGAGCGGGCGGTGAAGCAGCGCGCCGAGTAGGCCAGCGGCAGGTGGCCGTAGCTCAGCACCTCCACCTCGAAATCGTGGCGGAAGCCCAGCTCGTCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //