Array 1 1221001-1220791 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059254.1 Streptomyces albidoflavus strain J1074/R2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1221000 28 96.4 33 ........................C... CCTCCTCAGCCTCTACAACAGCACAGCCGGTGC 1220939 28 100.0 33 ............................ CGGCGAGCGGCTGCTCGACGACCCCGGGTGGGT 1220878 28 96.4 33 ...C........................ CATGAGGACGGGCATCCCGTGCGCCTCGGCCAT 1220817 27 78.6 0 ...C.......GA.........C.-.G. | ========== ====== ====== ====== ============================ ================================= ================== 4 28 92.8 33 CTGTTCCCCGCACGTGCGGGGGTGGACC # Left flank : TGGCCGAGCGGTCCTGGTCCGGTGTCGAACCGGAGCCGGGCACGGCCTCCTTCGTCCTGCCGCACGGAGAAGCGCGGTTCGTCAACGCGGGGATCGTCCCGTGGCTGGACACCCATCAGCACCCTTCACCGCTACGGCAGCCACGTCACCGCCTCGGCGAGCCTGACGGCCCTGAGGGGGACCTCTGCCCGGTCGAGGAAGAGCAAGGTGTCCTTCTCGACTCTGCTTCGGGGTTGGCTGGGCAGCTCACCTGTACGGAGACGGGTCGCGCAGACTGCGACCCAGACCATCCCCAGCACCCAAGGGGGTGCAAAGGCTCCGGCCGTGGCGCCGGGGTTCGCGCTCCTGCCTGCCGACGACGGGGATGGGCATGCGTGCAGTGCTCGGCGGGAAACCCCGGTAGCAGGGGAGGGATTCGGACGGCGGAGGCTAGGGTGGCGGACATGGCGAAGTTGGCGTGGAACGGCGACTTGCCGAGGTGAAGATGCAGGTCAGGGAGA # Right flank : CTCCCGGGCTCCAGTGCACTGGCTATGAGGAGCCCGCGCCCTTGAGCCCCGCAGAGCCACGGTCGTATCCCCGCCATGAGACGGAGCCACGCCCTCGACCGACCTACGCATCGACCGCGTACGAAGAGGCGAACTGGGCGCCACCGGAGAGGACTTCTGCAAAACGTGTCGGGAGCCTTCACCCCACAGCGCCCCTGCTCACCGCCGGTATGCCTAGGTGCACGACGTGGCCCGCCGAACCAATCACGTCGCACGAGCCCGTCAGGCTGTCCTCGGCCCCCCGCGCGCCCCAGTCAGAAGGGCCCACCCTCCGCTAGCCCCGCCCCGCCTCCCCGGCAAGCGGTCACGCAACCCCCGCAAACGCCTCTGCCACGTGCTCGCGGCAGGCAGCGCCCCCGCACCTGCACCCGGAAGCTCCCCTGCCCGGTCCTGCCAAGCCGGGAGCATGCCCCCGAGGCAAGCCCAGGCGAGGCCCACCGGCCGCCCCTCTCGCCCCGCCA # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACGTGCGGGGGTGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCACGTGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2258732-2258580 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059254.1 Streptomyces albidoflavus strain J1074/R2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2258731 30 100.0 31 .............................. GGCGGCACTGTCGATCGGACCGAGCCCAAAT 2258670 30 96.7 31 ..............T............... AGTGGAACGGCTGATCGCACCGAACCAACTC 2258609 30 96.7 0 ..........................A... | ========== ====== ====== ====== ============================== =============================== ================== 3 30 97.8 32 CAGCCCGGCCGGCGCTTGAGGCCATCGGTA # Left flank : GAATGCCCGACCACCACCGGAGCCACCCCGAACCCGTCCACCGCCTCCTGCACCACCCGCGTGTCCTCCCGCAACGACCCCCGATGCAACTCCGGAACCACCACCTCCACCCCCACCCGCCGCAACCCCGCAGCCACCACCCCAAAATGCCCCGCCTGGTGATAGAGCCCATGCACCAACACGACCCCACCCATACGTCCCCCCGCCTGGTCCTGAATTCAGGACCACTCGCCCCTTGGTCGCTGCGTTCAGGGTCACTGACCCCCTAGTTCTGCGTTCAGAGTCCGGCCCTGAGTTCAGGGTCCCCCCGTCCTGGCCCTGCTTCCACAACCCGCCTGGCTGGTCCTGCACAGACGGTCCGCTCTCCCTGCTCCGATTCCAGCAACGGCCTACTCCCTCCCGAACTCACCGCCCACCTCTCTCGCTCCGGCCCCCTGCCCCCGGGCCCACGGCCCCGCCCCTGCTCAGCGGCCACCTTCCGATCCAACGGACACCAATCC # Right flank : AGCGGCACCCCCAGCCCCAGAGGCCGCCGCCAGGCAGACGCACCCACACCTGAAGCCACACCCCACCTCCCCACCGGTAGGCTCTGATCAAGCGGGCCGCAAGCCCACCTCACCGCCCCGAAGGGAACCCCCATGGCACTCGAAGCCGGCCTCCTGGAAATCCTCGCCTGCCCGGCGTGCCACGCCCCCCTTGAGGAGTCGAAGACCGACTCGACCCCGGAACTCCTGTGCACCGGCGAGGGCTGCGCCCTCGCTTACCCGATCCGCGACGGCATCCCCGTCCTCCTCGTCGACGAGGCCCGCCGCCCCGCCTGACCAGGGCGGACAGGCGTACCCGCACGCGCGGCACGCGAACCCCGCCCGGGGCGGACCAGGCGTACCCGCACCCACGGAACGCGAGCCCCCGCCTGACCAGGGCGAACCAGGCGTACCCCGCGGACGCGAGCCCCGTACGAGGCGCGACCGAGCCTCGCGGAGGTAGCCCGCCCCACCCCGGGGCA # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCATCGGTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 2718855-2719126 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059254.1 Streptomyces albidoflavus strain J1074/R2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 2718855 27 100.0 34 ........................... CCAGTTGGCACCGCCGCACGATGATCACAACCCA 2718916 27 100.0 34 ........................... CCGCCGAGGGGTTGTGGATGAGGCCGCCGCGCTG 2718977 27 100.0 34 ........................... CCTTCGGGCTCGCCACCTCGACCGCGAGCACAGT 2719038 27 100.0 34 ........................... CCTCGTCGAGGGTGGCGTTCAGGACCGTGACGAT 2719099 27 100.0 0 ........................... | T [2719124] ========== ====== ====== ====== =========================== ================================== ================== 5 27 100.0 34 CTGCTCCCCGCGCGTGCGGGGTTGGTC # Left flank : GCGATGAGCCTGCTCCGAGCAATGGACATGCCGCTCTCGCCACGCGAGGTGCGGGTGCTGAGCAGGGCCGCGCAGGGGGATTCGGTGGCGGAGATCGCCCGGGGGTTGTGCCTGTCGCACGGGACGGTGCGGAACTACATCGCTTCGGCTACGCGGAAGGTGGGGGCGAGGAACCGGGTGGATGCGATTCGGATCAGCCGGGCGGCGGGGTGGGTTTGAGGGGGTGGGGTTGAGGGGGCTGGTGGGGGCTTGGGTGGTACGGGGGTGGGGTTGGGACTTGGCGGGTGGGGTGGGGGGTTGGGTCGGGTGAGGCTGAGGAGTGGGGTCGGGGTGTGAGTGGCTGGAAGGGCGGGGTTCGCGGGAGATCTGTCGGGTTCAATGGGGGGCGGGTGCTGGGTGGACACCATGTAGGGGGTATGAGGCATTCACCCGCATTGCCGGAATCTTTGAAGCTTGCGGGAGAGAGTGACTGGGCTGAGTGAAACCCCAGGTCAGCGAGA # Right flank : CCCTCCCGGCAGCCGCCGCTCCCCGCCCACGCCTAGGTCGACGCGGTGCCCCGGCTCCCCATCGCCGAAGGCTCCCCCAGCCCCGCCGCCAGTTCCCCGTACAAGGCCGACTCACGAAGGAGCGAGGCGTGGGTCCCCAGGTATGGGGTCGCCCCGTCCAAGAGCAGGACGCGTTGCCCAGGTTCAGGCGCCGGAAAGTGGTGGCTCACTGTGATGACCGTGGCCGGGTGGGAAGCGAAGGCCAGCTCGGTCGCAGCCCGTGCCCCTGCGTCCAGGTGGGCCGTGGGCTCGTCCAGGAGGAGCAGGGGCGTAGGTGTCAGCCAAGCCCGGGCCAAAGCAATGCGGCGGCGTTCGGACGGGGTGAGGTGGTCCGGGCGGAGAGGGCGGGCGGGGTCAGCGGCGAGGGGGGCCAGGGTGAAGGTGTCGATGGCTTCCGTGATGCGAGGGGCCGGGGCGTTCGGGGCGAGGTAGGTGAGGTTGTCGTGGAGAGGGGCCTCGAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGTTGGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGTTGGTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 4533408-4533195 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059254.1 Streptomyces albidoflavus strain J1074/R2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 4533407 30 96.7 31 .............................C TCCCGCACCGGCGGGTGTGGCTGGTCGGCGA 4533346 30 100.0 31 .............................. ACCTCGTCCTCGACGAGCTGTGGCGCGTCCT 4533285 30 90.0 31 ...........A...........A.....G AGGCCACTCCGGTCGTCACGAACATCATCGA 4533224 30 76.7 0 ..............G......CAA.C.T.A | ========== ====== ====== ====== ============================== =============================== ================== 4 30 90.8 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCT # Left flank : TGGGCAAGCCCACACCGCGCCCCCGCTACGCCACCGGCAAAGTCCGATACCAGGCGAACTGCTTGTGAGTGGGCATCCAGTGCTGGCCGCACCTGGAGCAGTACCAGCGCCAGTTGTCGGGGTCGTTGCGGAGGTAGGTCGTGTCCTTCCAGAGCCGGCCGTGGATGTCCGTGTGGCAGGCCCGGTCAGGACAGGGCGGGGGAACGGGCGTGGTGCGCGGGCGAGTTGTGGTCAGCATGGGCGCCTCCGTGACTCGATGGGGTCAGGAGGGTGAAACGAGGGGGCTCGGGGCTGGGTGTGGGGCCGGGGCGAGGTGCGTTCGTTCGCGTGATGAATGGGGGATGAGATGCGCGGGGGACCGGGGTCTGCTCCGCCGCCTCGGTCCGCTGCGTAGGATCTAGCGAGGACTCAAGGCGAGGTGGGCATTGGGGCGAATGTCGCTATCGGTGAAGCGTTCAGAAACTGGGGCAGGGGTGCCGTAAGGCCGCTGGTCAGGGAGA # Right flank : CCCCGCCTCACCCCGACCCGGCGCCCAGCGCCGCCACAGGCCTTGCTCCCCCCACCCCCACCTCCTACCATGAATGCGCTTTCACAACGCGTGAGGCGGGTCGGTGGGCTCGGGTTCTGGATGGTCGGAGCGGGCGGGACGGGATGAGGGTAGGGGCGCGTGGGTGACGGGGTGGCGGGGACGCCGACGGTGTATGACGTGGCCGGGCGGGCCGGGGTGTCGATCGCGACCGTGTCGCGGGTGTACCGGAGTCCGGAGTCGGTGCGGGAGGCCACGCGGGAGAAGGTGCTCGTGGCCGCGCGGGAGCTGGGGTACGTGCCCAGCGGGAGTGCGCGCGGGCTGGCGAGCCGGTCGACGGGGGTGCTGGGGCTCTGCTTCCCCGACTACTCCGACCCGGACGCCGAGAGCGAGGCGGCCACGGTGGACGCCGACGACGACCACGCGTTCATGCTCTACTCCGACCAGATCATCCGGGGTATGGAGCGGGCCGCGCGACGGCA # Questionable array : NO Score: 3.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 5468336-5468486 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059254.1 Streptomyces albidoflavus strain J1074/R2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5468336 29 100.0 32 ............................. GAGGGGTACGCCATCACCGGGCGGCCGCCGGC 5468397 29 100.0 32 ............................. CGGGCCAGGTGGGCGATGGCCTGCTCGACGTC 5468458 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : TCGTCGACACCATCGAGAAGCAGGGGTTCACCATCGACAACCCCAACGCCACGGGCTCCTGCGCCTGCGGTGACTCCTTCAGCTGAGTCGCTTCGCCGAGAGGCGGTGCCCCACTTCGGTGGGGTGCCGCTTTTTTGCTGGCCGGGCCTCACTTGCCGGCCGGGCTCGGTGGCCTCAAGCGCCGGCCGGGCTGGTTCGGCCTCAAGCGCCGGCCGGGCTGGTTCGGCCTCAAGCGCCGGCCGGGCTGATGGGGGTCGTGTTCGGGGCGCGGGCCGTCGGCCTGTGCGGTCACAGATGGCCTCAATCGCCGGCCGGGCTTGAGTTTGGCTGGGCTTGGACGGTGGCCTCAACTGCCGGTGCTGCTGGGGGGCTGGGAGAGGATGGGCGGGGCTTCGGGCGCGACAGGGGAGGGTGTTTGCCGACTTTCAACCCAATTGCGGCATTCTCGCAAGCTTGCAGAAATAGGCTGAACTGCTAGGCAAAGCCGCAGGTCATCGAGG # Right flank : CCGTTCGAGGAGATCCGCTGTGGCCATCGTGTGGTGCTCCCCGCGTACGCAGGGGCCCCCGGAACCCAGGTCTCCCACCTGCTCAGTGCCACCGCTGGGCGCACCAGACGCCCCCAGCCCAGCGCCCCCCTCCCCTCAGAACGCCAAGATCGTGACCGTAGCCGCGTAGATCACGACCAACAGCGCCCCGTCGAAGCCCAGGCGGAACCAGCCGCGTTCCTGGCGGATGAGGAGGCCGCCGAGGACGACGGTGGTCATGACCAGGGCGGCGCTGGTGAGGAAGAGTTCGTCGTTGCCGGCGGCGTGGTAGAGGGAGCCGCCGCGGTAGGCGAAGTCGCCGACGGCCAGGTTGAGGACGTCGAGGGAGTTGCCGCCGATGATGGCGGCGAAGGCGAGGGTGATGGCGCCGCGGCGGACGGCGGCGATCGAGGTGACCGCTTCCGGGAGGCCGTTGATGACGCCCAGGATCACCGCGCCGACGAAGCCCGCGCGCAGGGTGG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //