Array 1 1074730-1073110 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT907931.1 Latilactobacillus sakei strain J160x1 chromosome LSAJ160, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1074729 36 100.0 30 .................................... AATATATGAATAAATTATCCCAATCATCTA 1074663 36 100.0 30 .................................... ACCGTTAAGCTACTAGGATTACGCCGTTAA 1074597 36 100.0 30 .................................... AAACTTGGTAGCGGGTTAGATTCCGCTTCT 1074531 36 97.2 30 .......................C............ GAATACTTGCGCGAACAGAATCGGGATATT 1074465 36 100.0 30 .................................... ATAATGAGTCGTCGTCGTTCCAGATTGTTG 1074399 36 100.0 30 .................................... AATTTAACAAAGCAATCCGTTACAACAACT 1074333 36 100.0 30 .................................... TTAAGGCGCAAGGGCTAGAGATACAAGGCA 1074267 36 100.0 30 .................................... ATTTAGAGGGAGGATTTACAATGAGCAAAG 1074201 36 100.0 30 .................................... AACGTCTGGGCTTATCGTGTTTGGATTGAC 1074135 36 100.0 30 .................................... CTGCTGTTGTAGCAAGCATGGTGGTTCTAT 1074069 36 100.0 30 .................................... TTTAGAGAGAAGTATTCTATCAATAACCAA 1074003 36 100.0 30 .................................... ATATCTGCTTTAATATTATTGACTTTTCTG 1073937 36 100.0 30 .................................... AATTATCGAAAATTTATTACAAAAAGCAGA 1073871 36 100.0 30 .................................... ACGCTATATTTATTTCTTTTAATTGCCATT 1073805 36 100.0 30 .................................... TCACGCGTTCGTTGGGACTCGTGGCGGGCT 1073739 36 100.0 30 .................................... AATGGCCACAGAATTTTCTGCTTCGCTATT 1073673 36 100.0 30 .................................... GGCTTAAACGTGTTATGGATAAGCGTATAG 1073607 36 100.0 30 .................................... ATTAACAGAGTAATTCTAATAGGACGATTA 1073541 36 100.0 30 .................................... ATGTGCCATTTAAATCACTCCTATTTTCTG 1073475 36 100.0 30 .................................... ATGGCTTTGATTCTGGTTCTGTCGGTTGAA 1073409 36 100.0 30 .................................... CTGAAGCTGGCATCGAATTCGACCCCAACG 1073343 36 100.0 30 .................................... ATCCCACAAGCAGCGAAATCTCTAATGCTT 1073277 36 100.0 30 .................................... CACGTCCATGATGAGGTGATCGCGGAGCAG 1073211 36 100.0 30 .................................... TAGAATCACGCGGCTTTCTTCAATTTTGGG 1073145 36 91.7 0 ..........................A......G.T | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.6 30 GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Left flank : GCGGTTGATTTAAATCATCTTTTTCAAAATAAGTTGATCAAAAAATTTACAGCCGATCTAACGGATGAACAACGACAAAAGGTAGTTAATCTGAATAATGAATTACGAGCCACTATTTTAGAAGCCACGTTTATGTATGAATTAGCTTTAGATATTGACCATGAGTTAGATTTGCAAAAGTTAATTAAATTTTGCAATTTAAAATTTTCGAATGATGTTCAAGATGATCCATATGGTATAATTGAAAGCATAGTACAAACTGCTGTAGAGTTACAAGAAACAAGAATTATCACGTTGATCAACGTTTCGCACTATCTTAGTATCAACCAGTTTAATGAACTGGTAAGACTAGTTGCGACATTGGATGTGAAACTCTTTATCATTGAATTTTCAGAATTGGCAACGCCTGACAGGTACCAAGAATGCTGTTATTATCACATTGATAATGATTATGTTGAATGGCGCTACGAATAAAGTGAGTATTTGATGAAAAAACATCG # Right flank : CACAATAATTATCGTAAATTCTTTTAATTTAAGTTTGGAGAGTACCTTTAAAGGGGTACTCTTTTTTATTAGTTTTAATGTATATCCTTGATTGATATTTCACGATTCGACTATTGAAAAGCGTTCTCATTTAGCTTAGAATTAAGTCAGCAACAACGTGCTATAATGCGATTTTTGGAGGGTCAGTAATGTCTAAATTAGAAATTATCGATTTACACGTCGGAATTGACGGTAAAGAAATTTTAAAAGGTGTTAACTTAGAAATGAATACGGGTGAGATTCACGCCATCATGGGACCAAATGGGACCGGGAAATCAACCCTTTCAGAAACCATCATGGGGAATCCTAAATATGAAGTGCTTCAAGGTGAAATTAAATTAGACGGTCAAAATATTCTTGAAATGCCAGTTGATGAACGAGCACGCGCTGGCTTATTCTTAGCGATGCAATATCCATCTGAAATTCAAGGTGTTACAAACGCTGAATTTATGCGAGCTGCT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //