Array 1 909736-910203 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP086380.1 Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 909736 37 100.0 35 ..................................... AACCTCATCACCATCAGAAAGGCCGAGAGATTTAA 909808 37 100.0 35 ..................................... AGCTTGGGACACCCGACCCGCAGCCAGATCACGGT 909880 37 100.0 32 ..................................... GCTTTGCTTCCGCTCACGGCTCAGGCGTTCGG 909949 37 100.0 35 ..................................... ACGTAATGCTCAAGATGCACCCGGTTATATATCGG 910021 37 100.0 36 ..................................... TGGACATCTCCGACCTGATTAGCGCTGGAGACCTCA 910094 37 100.0 36 ..................................... CAGCTCGGCGCGGCGCTGTGCCAGTTCGGCGTCGGT 910167 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 7 37 100.0 35 GTTGCACCTGGCCTTCGGGCTGGGTGAGGATTGAAAC # Left flank : CTGAGCGGGCGGGGTGGCAAGGGCGTAGCCACCTCCTTCGGCACCGTTGCAGCGCTCTCCCCTGCCATCGGCATCTTTGCCTTCGTCCTGGCTATCTTTACCATGTGGCTGACCCGCTTTGTGAGTGCCGGCAGCATCATCGGAGCGGCAGCGGTACTGGCGCTGCTGGGTTTCAGCTATCTGGTGCAGCTGCCCCCACCCTGGTATGCCACCGCCGCACTGGCTTTTCTGGCTTCGCTGCTGATCTGGCAACACCGCGACAATATCAGGCGGCTGACGGGCGGGAATGAGCGGCGCTTGGGCGAGAAGGCGTAATGGTTTCTGCGCGAACCTGCAGTACACGGCACAACCCCACCCCTTTCGCGCAACCCGAATTGTCCCACTGGCACGCCATCCGCTAACGCAAGAGCAATGGCGTCATCTGGCCAAAGTCAATTCACAATAGGGCTCGCGCAAATCGGGTGATTCCACGCCTGCAGCACGGCATTGATAGAATGACC # Right flank : CAAATTCTGGGCTGGTCATCATGTCGTAACGGTTGCTGTTGCACCTGGCCTTCGGGCTGAGGAACGCAATCCTCCTGCTTCGGCGGCACTAGCATGAGCCCATGCCCGAGCTGCCCGAAGTCGAAACCACCCGCCGAAAGATCGCACCGCTGGTCACAGGCCGCACCGTGCTAGAGATTGAGCATTTCAGCCCGGACAAATACCCGGACACTGAATTGGCCCACGGCCGGATCATTAGCGAAGTGCAGCGACGGGGCAAATACCTGATTTTGCCACTGGCCGACCAGGCTGGCGGGCCTGCCGATTACGAGCTGATCGTGCATCTGGGCATGACCGGGGGCTTCCGGCTGGAAGAGACACAACATACCCGCCTCACCTTACGGCTAAATGACGGCGCGCTGCATTTCCATGATCCCAGGCGTTTCGGAAAAGTGCGAGTGGTGCGGGTAGGCGACTACGCAGCGCTGCCCACCCTGGCAGCAATGGGCCCTGAGCCGCTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCTGGCCTTCGGGCTGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA // Array 1 219731-218614 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP086382.1 Deinococcus radiophilus strain ATCC 27603 plasmid pRadio2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 219730 37 91.9 35 .................................GCT. TGAATGTTGGACGCCCGGCCCTTCCTGACCCTGTT 219658 37 100.0 36 ..................................... AGCACGGCGCACAGCTCCTGCGTCGGTGCGGGCCGT 219585 37 100.0 36 ..................................... ATCGGGGCGCTCCCCAGCGGGGTAGAGATGCCAGAC 219512 37 100.0 34 ..................................... AAAGCTGAGCATCTGGCTTTTACCGGCACACCGA 219441 37 100.0 35 ..................................... AAGCCTTGCTAGACGATTTAGGCGATGCTTGCGAG 219369 37 100.0 33 ..................................... CGGACGACGGGGATTACCGTGTCAAACTCTGGA 219299 37 100.0 34 ..................................... CGGACGACGGGGATTACCGCATCAAACTCTGGAG 219228 37 100.0 36 ..................................... ATGCGGGAACGCAGTGCAGCCCTTGAGAAGGAATGC 219155 37 100.0 36 ..................................... TGGGTGGCCTGCTCGGCGTAGCGCCGTCCAGCCGCG 219082 37 100.0 36 ..................................... TTCTCCTTAGAACGTCAGCCCATCGGCAGCCATCGC 219009 37 100.0 34 ..................................... GTTGCTTAGGCCGTCCAGCACCCCAGCGACCCCC 218938 37 100.0 36 ..................................... AGCAGCGATTGTCACGCGGGCATAGCCTGAGCCGGT 218865 37 100.0 33 ..................................... TGGTTAATCCCAAAGCGGGGGCCAGTTTCGCCC 218795 37 100.0 36 ..................................... CAGCGCCTGCTCACGGGTGAGCGTGACAGAATCTGT 218722 37 100.0 35 ..................................... CGTTTCACCGACAACGGCTACGGCACCCGCACCGT 218650 37 83.8 0 .........................ACAA...C...A | ========== ====== ====== ====== ===================================== ==================================== ================== 16 37 98.5 35 GTTTCAGCCTGCCTTCGGGTGGGCTGTGGATTGAAAC # Left flank : CTATCCGCCGTATCTACATAGGTAGAGATGATTGACTTGCTGATTTGTTACGACGTGGCCACCTCGACCGAAGGCGGAGCCAAGCGCCTTCGCCGCGTGGCCAAAGCCTGCACCGCGCACGGCCAGCGGGTGCAGAACAGCGTGTTTGAGGTCAGCGTGACCGACGTGCAGCTGCTGCACTTGCGTCAGCGCCTGCTGGAAGTGATGGACGCCGACGAGGACACCATCCGCATTTACCGCCTGCGCCAGCCCCGTGAGAAATTTGTGGAGGCCTACGGCAAAGACCACTACACCGACTTCAGCGAGCCGCTGATTCTATAGCGCGAACCTGTGGCGACGGCCAAAAGCTGGGGGGTTCGCGCAAGCCAATCAGCCCGTGTGGGGCGCGAAGTATGACAACTCAGATCACTGTAAATGGCTGCGAACTTGCACATGCTGAGGGGGTTCGCGCAAACTGAAGGCGGGACGCCGTCTGACACGCCGCTGGATGGTGAACTGTT # Right flank : ACCATCAACGGAACAAACCAGGCGATGTTGAAACTTCTGATCGCCTGGCCTGTCGCGTCAAGTCTTATGAGCAGTGGTTCAGTCCACTACTCGGGCAGGTACGGTCAGATCACAGATGCTAAAGTCGGCGCCCCGCTCAGCGCGTTTCTGAGAAATCACGGCCTGGAATTCGTCACTCTGCGGATTCAGGATCTGCACCGTGGGTCGCTCATCTGCAGGAATATCAGCCAGTACACGGACCTGCCGCATGGTGTCGGGGTTGGCGGGCGGCTCGCCGGCAGTCAGTGCCCGGATGACGGGTTCGCCGATCACGGTGTTGCCCCAGGCCGTGTAGTCCAGTCCCAGTCGGAAGGACGAAGCGCCGCGCATGAAGAAGATCTCGCTGTTGGCGCTGCCGATGTCTTCGCCGCGTCCCATGCCTGCTACACCTGGACAGTACGCGCCCCAGGCCTGGAAGTTATCCACATCACGGCGGCGAGTTTCTGCGTCCGAGACAGTCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGCCTGCCTTCGGGTGGGCTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA //