Array 1 84986-87596 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLNX010000001.1 Limosilactobacillus reuteri strain N11 No.11_ctg0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 84986 36 100.0 30 .................................... AAACCCCTACGTCCGACATGACTTTCTATT 85052 36 100.0 30 .................................... TCAATTTTAGAATTACGGTCAAGAATTGGC 85118 36 100.0 30 .................................... CGAAAGAGGAGCTTTCATCTCCTATCATAG 85184 36 100.0 30 .................................... CCAGAGGCTAGTAGAAGTAACAGTTACCCC 85250 36 100.0 30 .................................... CATTCAGTGGTAACGCTTCGGGTGTTGCTA 85316 36 100.0 30 .................................... AAGTAACATATCATCACTGTCATCATCTAA 85382 36 100.0 30 .................................... GCTCTGTATTCCACAGAAAGTCTAGTAACA 85448 36 100.0 30 .................................... CCGTTTTTAATTTTGAACCACTTTATTCCT 85514 36 100.0 30 .................................... TTTAACCCGCGTTAATTATCAAGAATACGA 85580 36 100.0 30 .................................... TAAAGGCGATAAGACACAACTCACATTCAA 85646 36 100.0 30 .................................... TAACATTAACGAATAACGCATAACCAAGCA 85712 36 100.0 30 .................................... TGGTTCGACGTGACAAAACGTACACGACAA 85778 36 100.0 30 .................................... CAGTTGAAACGTGCTGGCTATATCGCACGT 85844 36 100.0 30 .................................... CAATCGCATTATATTCCGCATTTTCAGCTT 85910 36 100.0 31 .................................... CCTACTCAGCGTTCGATGGAGTTAGGACTAT 85977 36 100.0 30 .................................... CATAAAAGAAGCCGGGTTTTGTTAAATTGT 86043 36 100.0 30 .................................... AGGGGAGTAGGGCAAGTGAATAGCATATTT 86109 36 100.0 30 .................................... TCAAAAAATTATTAAAGGTTGACGCGTTCA 86175 36 100.0 30 .................................... TTTCAACGTCAAGTGATTACTATACACAAA 86241 36 100.0 30 .................................... TATATTTTGGCTTTGAATCACACCCCACCG 86307 36 100.0 30 .................................... TGTTTAATAATTTCGTTCGGGTTGGCATAG 86373 36 100.0 30 .................................... ATCCGTTTACCAAGATCGTTACAAAGCTGA 86439 36 100.0 30 .................................... CTTAATTAACGCGTCAACTTCCGCTTTGGT 86505 36 100.0 30 .................................... GAACTACCGCAAGATTGATATGGAGGTAAA 86571 36 100.0 30 .................................... CACTTAGTTCTGAATTTCAATACTAAATCT 86637 36 100.0 30 .................................... TCTTTACCGAATCAGAATTAGAACAGCTCA 86703 36 100.0 30 .................................... TTTTTTTGTTGCGATAACTTCTTAACATCA 86769 36 100.0 30 .................................... AGCAAAACATCACATGTATCCATTGCCCGT 86835 36 100.0 30 .................................... AATCGTTTTTGCCTTCCCATAGGCTAGGGT 86901 36 100.0 30 .................................... TCCGTGCCGCTGCTGCTAAGATGCACGTTG 86967 36 100.0 30 .................................... TGAATGACATGCGATATTTCATGAGCTAGC 87033 36 100.0 30 .................................... TTATGCATCAGGGGAACTTGCTTTTGATGG 87099 36 100.0 30 .................................... TTCGTGGCTACGCATTGCTTTCAATGTTGG 87165 36 100.0 30 .................................... GGTGAACGGAGGTGTGGTGATATGCGTACT 87231 36 100.0 30 .................................... ACCCGTTCATTCGGACCGCTAAAGGAGCAA 87297 36 100.0 30 .................................... TGTTCGATTAAATGCGATATGTGGCAATAT 87363 36 100.0 30 .................................... ACAATAATTGATAGTCAGTTAACGTTGTTG 87429 36 100.0 30 .................................... CTACTCAACAGTCTTGAAGATAGCCAGTTA 87495 36 100.0 30 .................................... CTTTGACCAGTTACATATAGCGCATTAACG 87561 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== =============================== ================== 40 36 99.8 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TAAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCTATTACTAAAAGAGGTGAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGGTGGCTAACGAGCTTGGCTATTGGAACAGCCACAAGAAAAACTCTCGGCAGCAACCAATTCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTACGCAATGCAATTATTAAAGAAGTCGATGAAGCTGGAGCGCAGGTTGAGATCTTTAGTAATATCAAAGATTTAATTGCGGCGGCTGATTCGATCCAAGGATTTATTGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //