Array 1 246-638 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTFU01001038.1 Streptomyces albidoflavus strain 145 NODE_2087_length_10163_cov_47.376858, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 246 28 100.0 33 ............................ GACAACGCCGTCCTCGTCATCAACCGGCGCGAA 307 28 100.0 33 ............................ CGAGTAGCCGCCGTACTTCACGGCCACGTACAG 368 28 100.0 33 ............................ CGGGTGGTCGGCGATGAGCGGGGTGTCGCGGGT 429 28 100.0 33 ............................ GATGTTCGGCTACCTCAACGAGTCGATCGCCAC 490 28 92.9 33 ......T..........A.......... GGCCGGGTGGACCGGCCGCCTCGCCTGCGGCCG 551 27 96.4 33 .................-.......... GATCGTCGGGCGGTGGCTGGCGGCCACCGCGGC 611 28 85.7 0 ......A.............A.....GG | ========== ====== ====== ====== ============================ ================================= ================== 7 28 96.4 33 GTCGGCCCCGCGCCTGCGGGGGTTCTCC # Left flank : CGAAGTCCGCATCACCGCCCGCCACCGCCAGTCCTTCCAGAAGAACGGACACGGAGCGCACGTCGTCTTCCACAGCGCAACCTTCGAAGGCCGCCTGCGCATCACCGACACCGACCGCTTCACCACCAGCCTCCTCACCGGCCTCGGCCCCTCCCGCGCCTACGGCTGCGGCCTGCTCACCCTCGCCCCACTGCCCGGACAGCAGACCTGAACCATGGCCGACATCTGGTGGAAAGCCGACCCGCG # Right flank : GGGTGTGACCGAGATACGCGCCAAAGGGGCAACGGGATGATCTTGAAGCCCTGATCCGCTCGGATCTACGTGCGGCGACGTGCAGCGGGGTCGCGTTCGGCGACGTGCCGAGCGACCGAGTCGACGCCGGGCCGTGCGTATCGCTCCAGGGAGCGGACGGAAGCGTGGCGGGAGCGGGCCAGCAGCATCGGGGTGGAGGTGCCGTCTTCTGCGTCGTGCGTGAGGGCACTGTGACGTAGCCGGTGAAGCGTCCAGCCGTCCAGATCCTCGATGTCGTCGGGTGAGGCGAGGGGGTTGGCCAGCAGCCGCGTGTTCTCCTCGAAGATCTCCTCAGCGCGGCGGTAGGAGAGCCTGGCCCGGTCGGTCTCCGGGCACACGTCGAGCGTCGGTGTTCCGGCCGGCGCCTTGCGGTCGGTGAGGAACAGCGGGCCGCGGGTGCGGCGGGCGATGAGGCGGGGCAGGAGCTGGGTGGTGCCGGACTGCCAGTGAATCCATTCGAT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCTGCGGGGGTTCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 131-1495 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTFU01001037.1 Streptomyces albidoflavus strain 145 NODE_2083_length_1468_cov_37.991146, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================================== ================== 131 29 96.6 32 ............................T CCGTTCGAGTCCGTGCTGCGGGACGGGGTGCG 192 29 100.0 32 ............................. CCTTCGGTGTCGAACGGGTCGTCAGAGGTCGA 253 29 100.0 32 ............................. CGGCTGATCAGCTCCAGCTCAACACCGGGCTT 314 29 96.6 32 ...A......................... GCGACGACGGTCCCAGGTCCGTAGCCCCGCCC 375 29 100.0 32 ............................. CGCTGGGATGACGGTGACACGTCGTTCGCCAC 436 29 100.0 32 ............................. CTGATCGGGGTACTCGTAGCCGAGGGCCACGG 497 29 100.0 32 ............................. CGGGCGTTGCCGTCCACGCGGCCGTCGTTCGG 558 29 100.0 33 ............................. CGCCAGGCCACCCGCGACGCGAACGCGACGGCG 620 29 100.0 32 ............................. CCGTTACGAACCTGCGAAGTTCCAAGAGGGTC 681 29 100.0 32 ............................. GCGGCGAGGGCGGCGGCCGAATCCATCTCCGC 742 29 96.6 32 ............................T CACCGACGGGCAGACCTCCTATTACTCGGAGG 803 29 100.0 32 ............................. CGTCCGGCCGGGGGGTCCAGCTCTGCGAGTCG 864 29 96.6 32 ............................C CACTTGGGCGCAGTCCGGTACCTACCTGGAAG 925 29 96.6 32 ............................C TTGTCCATGTCCCACATAGCGCCCTTGGCGCT 986 29 100.0 32 ............................. CCCCTCGCCCACGCCTACCGCACCGGCGCCCG 1047 29 96.6 32 ............................T CCCCACGTCGGGCGGCGTGTGAGAACAGCTGC 1108 29 96.6 31 ............................C GCCAGGTGGCCACCCAGTCGCCCGGCAGCCG C [1132] 1169 29 89.7 32 ..........T..C...A........... GAGTTCGCCGCGCGGGTCGGGTTCGGCCGACT 1230 29 96.6 32 .............C............... ACCGCACTCGCCCGGTTCTCCACCCTGCTGAC 1291 29 93.1 32 .............C..............C AGGCCGTCCCTGACCGAGGACCCTCTCTCTGA 1352 29 89.7 86 .............C..T...........C GGCGGTCGGTTCACAACGGGAACGGACTGGGTGTCGGCCACGGGGGATGCTCCGGCGTAGGCCAGGACCACCGGGCCCCGGTCCTT 1467 29 93.1 0 .C...........C............... | ========== ====== ====== ====== ============================= ====================================================================================== ================== 22 29 97.2 35 GTCGGCCCCGCACGCGCGGGGATGCTCCG # Left flank : CTGTCCGGCCGCGACCGCCCGGCCCCCGCCGCCCCTGGGTCGGCGCCCTCGCCGCACCTCCCGTACCGAAAGGGTGACGCACATGAATGAAAATGAGGCACCCTCGCGGTAACCTCCCAGGTCAGCAAGTG # Right flank : CACCGGTACGCGACGCCCGAGGCCGCCCGTCTATCGGCCCC # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.18, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACGCGCGGGGATGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACTCGCGGGGATGCTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 35082-34750 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTFU01001102.1 Streptomyces albidoflavus strain 145 NODE_2282_length_45048_cov_45.967236, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 35081 28 100.0 33 ............................ GATGGAGCGGGCCGCGCTGATCGCGGCCGGGGC 35020 28 96.4 33 ........................T... TGACCCCCTCATGAGTCTCGTCTTTGATGGGCT 34959 28 96.4 33 .......A.................... CTCGACGTCGCCCTCGCCGTCCACGTCGGTGCG 34898 28 96.4 33 A........................... GCACCGGTACGCGACGCCCGAGGCCGCCCGTCT 34837 28 89.3 33 A....................G.....T GGGCGGCACCATCTCCATCCGCCTCGACGCCAT 34776 27 78.6 0 ...............AT..AA..-...G | ========== ====== ====== ====== ============================ ================================= ================== 6 28 92.9 33 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : CCGAGCTGCGCGGCATGGGAGTGAGCGTGCTGTACGGGGAGGGCGGGTTCCAGCCGAATCCACCCGGCGAGGGCCGCGAGTTCCCATGGCGCCTCGCCCTCGACGAGGTCGAGCGCGCTGTCGGCGCGGGGCGCTAGCCTGCCCCCATGTCCTCCCTGCCTGCGGCCCGGCCGCGTCCTGCGTCGGTGGTGAACGCGGAGATCCGCGCGCTGATGCTGCGCTCGGGCGGCCGCCTGGCTGCCGGAGATAGGGCCCGGTACGTGGCGCTGATCGCGGAGTGGGCGGAAGCGGTCCGCGATGCCGTCCGACCTGCGGCGTAGGATCCGGCCGTGGACATCCCCGACACCTTGATCGACCTCCAGCGCGCCGCCGACGCGGAGTGGGCGCGCCTCGCCGAGCTGACCGACAACGACGAGCGGGCAGCAGGGGCGCGCGTGGTACGACGCTGGCGCCCGGGCCCAGGCCGCCGTCACCGAGTGGGCGCGTGAGGCCGCGCGGCA # Right flank : CTCGCCACGGTCATCGCCCTGGCACTCTGCGGCCGGCGGGCCCACCGGGTGCTGGGCGCACGGCAGTTGCCCACCAAGGCACATGCGTGGGTGTGGACCGAGAACGGCGCATTCGGGCTGTCCGGCCGCGACCGCCCGGCCCCCGCCGCCCCTGGGTCGGCGCCCTCGCCGCACCTCCCGTACCGCACGCCCGAAAGGGTGAACTGTAAGGCGCCATGTTGACGCTCTCGGGGGTTGACCTGCGGATCTGCACAACACCGCAGGCAATCCCCGTGCGGCGGCGCCACGGCCCGCCGTACACCGGAGGGGTGACAACACCCCTCCCGCCCCTCGTCCCCGTCTTCCGCCTGGCCGACGAGAGCCGCCCCACAGCCGGGCTGGGCCGAACCGCCCGGCGGATGCCCGCCGTCCTGGCCCGCACCGCCCGCCTCGCCTGGCGCGCCGACCGCCCGGCCGTGGTCGGCATGGTCGTCGCACAGGTCGCGGCCGCCGTCCTCGCG # Questionable array : NO Score: 3.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [20.0-16.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 39175-37844 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTFU01001102.1 Streptomyces albidoflavus strain 145 NODE_2282_length_45048_cov_45.967236, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================= ================== 39174 28 96.4 33 .........A.................. CCTGGGTGGGCGCGGTGACGAGCTGGGCGCCCG 39113 28 92.9 33 ..........................TA CGTGTCGCCGGGCTGGTACTGGCCCGTGTCGAT 39052 28 100.0 33 ............................ GAGGGCCCGGACCCACCCCCGGTCCTCACCGAC 38991 28 100.0 33 ............................ CTCATCAGGGCGCTGGATGCGGCGGGGGGCACG 38930 28 100.0 33 ............................ GCCGCCTGGCCTCCCGGTGGGCGCGGACGGTTT 38869 28 100.0 33 ............................ GCTTGGTGGGCACCGACTGGGCGTCGGGCCGCT 38808 28 96.4 33 .................A.......... CCTTGAGCTGCCGCACCTGCATGGCGATCTCCT 38747 28 100.0 33 ............................ GGCGTCCTACGAGCTGGAGGCCGAGGGCTTCCT 38686 28 100.0 33 ............................ CGACGCTGCTGCCAACACCGCGGGCGACGTCTG 38625 28 100.0 33 ............................ CGACCGGTACTTGGGCGGCTGGCTGTACCTCAA 38564 28 100.0 34 ............................ GATCACATCGCCGGGGCGGCTCCGTGCCGGCGGG 38502 28 100.0 33 ............................ CCCGTGTGGTCCGCCGAACTCGCCGGCGCTGAC 38441 28 96.4 33 .............G.............. GAACATCGCGGTAGTCGTGATCGCGATCCGGAA 38380 28 100.0 33 ............................ TGCCGTCGTCGTGGCGTCGCCGCGGTCGGACCC 38319 28 92.9 33 ...........G.T.............. GAGGCTGGTGTTCCGGCGGCCGGTCCAGGAGTC 38258 28 92.9 33 ............TG.............. GCGACCACCACGGCCAGGCCGTTCGCCTCTACC 38197 28 96.4 33 .............G.............. GACCGCATCGGGCCAGTGGCAGCACCGCTACGT 38136 28 96.4 33 .............G.............. GAGCTGATGGACGCCCTTCAAGGGCTGCTCGCC 38075 28 96.4 33 ...........T................ CTTCCAGACGCCGAGCCACTCGTCGCCCCAGGC 38014 28 96.4 30 .............G.............. GGGACCGGGGTGCTTCTGGGGGTACCGCGT 37956 28 100.0 57 ............................ CCAGCGGCGGGCGGCGAAGAAGGCCAGCCGCAGGTGCCGGAACTTGATCTCCCAGGG 37871 28 85.7 0 ....................C.A..G.T | ========== ====== ====== ====== ============================ ========================================================= ================== 22 28 97.2 34 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : CCTGCTGCCGGAAGTCCTTGTGCACTGGGACAGTGCCGGCAGACAACAGACTTGGGCCCGCCCCTGGAACTCTTCGAGCAACGAGTCAGACATTGACCATCCCGACGTGCCCGCCCGGCCGTTCTGGGCGACCGACGAAGGAGGCCACGACCAAGTCGGCTGCGTGTACACGGCCCAAGGCATGGAGTACGCCTACAACGTCGTCATCATCGGCGGGGACCTAGTGCGCCGTGGCGACCGCTGGGAAGCCCGGCCTGACGCCAGCGAGGACACCACACTCAAAAGCTTGGCGCCGGACCAGTACCTCCGGTACGCGCTCAACACCTACCGCGTCCTCGCAACCAGAGGCACCCGCGGGACCCGCTTCTATTCCACTGACGCCCCCACACAGAAATACCTGCGGAAATTGCTGCCATGTCATAAGCCTTGACTGCTTGGATGGCCGGGCCTCGACCTCGCATTCCGAGAGGCCGTTACGTACCTTGCGATATCGCTTATTC # Right flank : GCAACAGGGCTCTGGGTGGGTACGCAGTCAGACGTGCGGCTGGTCATCTGTCGCCCCGCTGCCCACCGCGCCGGTAGCCTTAAGTGGGCAGGTGCGGTGGGCGGCGGCGGTCTCCGGGCTGCACGGGCTGCCGCACCGGTCGCAGACCCCGCGCACCTCCTGCGGGCAGCAGGGGCAGGTGCAGCGGTTTCGGACAGCGGGCACGCTGTAGCCACCGATGTACCAGTCGGTGTTGCCGCAGCAGAAGCCGCATTCGCCGATGCGGCACGGTGCGCACAGGCCGCTCACGACCGGGCCTCCGCGCAGGCAGGGCAGGCGCGCGGGAACCACGAAGCCCACGGGCACTGCGGGTCCGGGCGCATGCCGAGGTCCACGGCCGTGGCGGTGTCGAGTCGCCCGGCGCACCACACGCACTCGGTGCCCCGGAGCTGCCGCTCGCCGAGCGCGGTCGGCTGCGGTAACTCCTGCGTTGTCGTCGCCATGGTCATCCCCTGCTGTCC # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 43541-42903 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTFU01001102.1 Streptomyces albidoflavus strain 145 NODE_2282_length_45048_cov_45.967236, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 43540 29 96.6 32 ............................C TGGGGAGAACTCCCCACCTCCCCAGCTGCCTC 43479 29 96.6 32 ............................A CTTTGGCAGATGTAACAAGCCCAGCGGCGGCC 43418 29 96.6 32 ............................C CGCAGCGACGGACGCGGCCATGACCGCCACTC 43357 29 100.0 31 ............................. CGCGGCCGGGTCCGGCGGACCCCGTGGGCGT 43297 29 96.6 32 ....A........................ CGGCCCGGCCCCTTCCCCGGCTCCTGCCACTC 43236 29 100.0 32 ............................. GCGAGGGGGCAAAAGTGTGACGCATGCGTCAC 43175 29 100.0 32 ............................. CCCCGGCCGCACCAGGGCTTGCCCCCACCGCC 43114 29 100.0 32 ............................. AAGATCCACGACCAGGGACGCGCGGTGAACGT 43053 29 96.6 32 ..T.......................... GCCAAGGCCGCATGGCTCATCGGCCGCATGGC 42992 29 96.6 32 ............................C GTCGGTGAGCTCCAGGTGCCAGCTGCCGGGGT 42931 29 89.7 0 .............C.......G......C | ========== ====== ====== ====== ============================= ================================ ================== 11 29 97.2 32 GTCGGCCCCGCACGCGCGGGGATGCTCCG # Left flank : CGGAGCTCCAGACACTGCCTGAGCAGATGCCCGATGTGGCGGCGCCGGCCCCGGACACCGAACGGCCCCCTCCCGTCCGGTGCGCTGGCTGGCCCGGACCTGGCTGGCGCTCTCTGATGCTGATGACCGGGCGCTGGCGCCTCTGCGGGTGCTGCCCGCTGCCTCACCCGCTCTGGCCGGCGCCGTCTCGGCCGCCGTACTGCAGATCCGCCCGGCCTGGTACCGGGGCCGCATCGCCTGCATGGAGATTTGGCTCGCCACGGTCCTCGCCCTTGCGCTCTGCGGCCGACGGGCCCACTGGGTACTGGGCGCACGGCAGTTGCCCACCAAGGCACATGCGTGAGTGTGGACCGAGGACGGCGCATTCGGGCTGTCCGGCCGCGACCGCCCGGACCCCGCCGCCTCTGGGTCGGGGCCCTTGCCGCACCTCCCGTGCCGAAAGGGTGACGTACATGAATGAAAATGAGGCATCCTCGCGGTGACCTCGCAGGTCAGCAAGT # Right flank : CGCAACTGGATGCGCTTGCCCTCGAAGGGCGTTCGCCGCCCCCACGGCAAGGTTCTTCTCCCACCGACGACCGGAACAAGTTCTGGCGCGATCTCATCAAGGCCATGACGGAACAGGCCCGCAATCTCACTGCCGACACGCGGGCGTCGAAGACCCGGCCGACGCCCTGCCACTCTTCTCATTCGGTTGACGCGCCGACCAGACTGCCCACGCAAAGCTCTTGCCAAGAGAGGTAGAGGTCGTCGGCTGCGTCCTGAAGGCTGCAGACCTGCTTTTACTGTCGGCGACTGGGCCTCGACGGTCGACTGGTGCCGCCATCGAGGCCGTCTGTCATGCCGAAGGGACGTCCTTGAAGGTGTGGGTTCGATGCCACTGGTAGTAGGGCTCTCTGTTGGCGTTCCACCATGAGATGGTCCGGCCCTCCAGCTTCTCCCGGATGTACGTGGCGACTTCGGGGCTGTCTGCCGCCAGCGGACTCACGCGAAGAGCGCCGGCGGGAT # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACGCGCGGGGATGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACTCGCGGGGATGCTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 10979-9850 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTFU01000148.1 Streptomyces albidoflavus strain 145 NODE_389_length_11929_cov_34.518150, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 10978 28 100.0 33 ............................ GAGGCGGCCGTCGCGCTGTACCGCGAGGTGAAG 10917 28 100.0 33 ............................ GTCGCGGTGCTTCTCCCCGCCGGCCTTGTGCGG 10856 28 100.0 33 ............................ TCTCGCGCCGGTAGCACGGCGAGATGGAGACGT 10795 28 100.0 33 ............................ GTGCCTGTGATGGTTCGCCCCGCCCGGCCCGAG 10734 28 100.0 33 ............................ CAGCAAACGCCCCGCCCAGGGACACCCGGGCGG 10673 28 100.0 33 ............................ CACCGCCTTGTGCGTGCCGAAGTAGCGGCCCTG 10612 28 100.0 33 ............................ CCACGGGGGCAGGAACTGAACCCCAACGGGGTG 10551 28 100.0 33 ............................ CTTCGTGCTGTCGTGGATCACGCCGAGGTTGAC 10490 28 100.0 33 ............................ CGCGCCGCAGCGTGGGGCTACGACAGAGAGCGA 10429 28 100.0 33 ............................ GTCCTCGTCCAGCTCGTGGTCGGGCCGCAGACC 10368 28 100.0 33 ............................ TCCGGTGAGGGTCGCCCTCCAGCGGTGGACCCG 10307 28 100.0 33 ............................ CTGAGCAGGAACTCAGGTTGCCGCCGCTGCCTC 10246 28 100.0 33 ............................ CGCTCTGACCTGCGTGACAGAGCGCGTCACACC 10185 28 100.0 33 ............................ TACGTACTCGACCCGCGCACGTTGTGACTCCAT 10124 28 100.0 33 ............................ GGGCACCCTCGCCCTGGTCGCCGCGTCCGCCCT 10063 28 100.0 33 ............................ CTCCGTGCGGGTCCCGTTCTCGGCGACGTCGCA 10002 28 100.0 35 ............................ TTTCGTGCCCGGGGGGGGTAGCGCCCGGTGGTGAT 9939 28 100.0 33 ............................ GGGTCTGTGGTCCCTCACTCCCGCCCAGTACGC 9878 28 96.4 0 .............G.............. | G [9857] ========== ====== ====== ====== ============================ =================================== ================== 19 28 99.8 33 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : AATGCAGGCGTTGCCTTACCAAGATCGTGGACAGCGCATAGCCACGCAAACAACCTGCGGCCCTGACCCGGACCACCGGACACCTCGTCCAGCAGGCCCCGTGTCGAAGGGGCAAGGAAGCTGTCCCACAGCCGCTCAGCCACAGCCGCCGTATCAAGCAGGTGCGACAGAAGAAGATTCGTCTGCCCGCCGGCACGCTCCGCCGACTTCCCCCACAAGACCCCTAACGGACCTTCCACTGACTCCAGCGGCACCCCTGCATCCGGCACGCCGGACCACCCTTCGCTCAGCACTTATGACTGCCCGGCACAGTAGAGGACACCACTGACAATTGACGGCGGACGGCCCAAAGACGAACATCCCCCACGGCGGGCGCCCGCACCACGCGGTCACACACCGCGCTCCCTGAACTCCACCACTCGCTGCCCGGCCACGAACGAAGGGCGACGCACATGAATGAAAATGAGGCACTCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : GTGCGCGCTGGCGACCCCCCGCCCGCCGGGACGTAGGCCGCCGATCAAGAGCCCGGAGACCGGATTCGCCCAAGGTCCGTGGTGTCGGACGGCGTCCGGGGGCGGTCTCAGGGGAGCATGGGGACGTGCTGAAACCTCCGATCGCGCCGATGCGCGCCGAGGCACGGGCCTCGCTTCCTGCGGCGGGCGCGCCGGCTGGCATGTTCTGGCAGCAGAAGCTCGACGGATACCGGGTCATCGCCTTCCTCCGCGGCGGCCGTCTGCACTTTCAGTCCCGCTCGGGGGCTGACCTCACCGAGCACTTTCCCGAGCTCCAGGCTGCCGCTGGCATCGGCATGGACCTGGTCCTCGACGGCGAACTGGTCGTGCTCCAAGGGGGGAGGCTGGACTTCGCGGCATTGCAGCAGCGGGCCCGGCTGGAGGGCTTTCGCGCCCGCTCGGCCAGCCGGTCGATGCCGGCGCATGTCGTCGCCTTCGACCTGCTGGAGGCCGACGGAGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //