Array 1 1201280-1200050 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029397.2 Acinetobacter defluvii strain WCHA30 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1201279 28 100.0 32 ............................ TGTTTCTATACATACACCGTTTTCTAATGTTG 1201219 28 100.0 32 ............................ GCCACGTCTAAGAACTTTTGCAACTTGAGAAG 1201159 28 100.0 32 ............................ AATTGCCGTTACTTCACCAGTTACAGCTTCTA 1201099 28 100.0 32 ............................ TTTTTGATCTTGGAAATCACCCTCTGATTTAT 1201039 28 100.0 32 ............................ ATATAAATTTAATCAAGATTTTGCAAATAAAA 1200979 28 100.0 32 ............................ GCATGAAACGCCTACGACTGTATCGCTAGAGG 1200919 28 100.0 32 ............................ TTGTCAAAATCACCGTAAATCGGAACAACACC 1200859 28 100.0 32 ............................ AAACTCACTAAACAGCTTCATTGCTTGGTCAA 1200799 28 100.0 32 ............................ TTTAAGTAATCGACCTAACCAATTCCTAAGCA 1200739 28 100.0 32 ............................ TCAATCGCATATGGTACTTTCAACCCCGGAGT 1200679 28 100.0 32 ............................ ACTAACACAATACCGTGCGTTAGAAACGGTCA 1200619 28 100.0 33 ............................ TTTATGTCTTGAATGGATTATTTTGCTTTATAT 1200558 28 100.0 32 ............................ TCGATGAACGATTATATAAAACTCGTGCATTG 1200498 28 100.0 32 ............................ GCACGAAACGCCTACAACTGTATCGCTAGAAG 1200438 28 100.0 32 ............................ ACACGGCAAATCAAATCAAGCGTTAATGTTCC 1200378 28 100.0 32 ............................ AACCGAACAGCATCCAACTTATTTGGTGACAT 1200318 28 100.0 32 ............................ AGTCGACAATTAGCACAGAACAGGGCTTTACT 1200258 28 100.0 33 ............................ AATCGATGAGCGAGGCATTAGAAATTTACAGGC 1200197 28 100.0 32 ............................ AAGTGCTTTGATCAAAAGTATTTGGGATGATA 1200137 28 100.0 32 ............................ TCCATGATGAGAAGGTATCAAACATCATTCTG 1200077 27 82.1 0 .......A.....A...A......-..C | T [1200058] ========== ====== ====== ====== ============================ ================================= ================== 21 28 99.1 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : GTATTTGTCGGACAATATCCCTTTATTTTTAAAATTCTGACAAAAACATGAAAATACAAAACTTCTTTCAATTATTTATTTTATTAAATTAAACAATTATTTATAAAAAATAATCTACATTTAACAGCTAAATAGACTTTTAATTTACTAAGGTAGGTTTTGGATAAGTGGTTATTCAGCAAATAAATATTTATACCTCAATGATACATTCATCTCCAAGCCCCCCTAGGAAGGAGAGTTTTTTGTAATCATTTCATTTTAAACGTGTACTCAAATTATACTTTTGACCTTTAACTAACTTTGAGAATGCACTGATCATAAGATATTTTTAAAATATGTATAAAAGTACTTTGACAAACGCAGGTTTTTACCCCAATATTTTCTTACTCTTTAACACCTTAATAAAATCAATAAGTTATACAACCACGAAAAATTTGGGTATTTTGTGATTTTTACTGCTAAAGCCCTGTTATTTTAATGTTTTATTGCTTAATATTACT # Right flank : CATAACCCTATAAGTTAATGCGAATTAAATTAAAATAGACTTTAACTCATAACCTTAAAATCTATTTCAAATAAACTCGCATGTTTAAACAGATTTAGAAGCGCCAGTGATAGAACAAATCAATCGCTTTTTCTAAAGACTGACTTGCTTCTAGATACAATCGTTTGTTCATTTGATAACGTAGGGTCAGCTTGTTCACTGGCGTAAATACGCCCACACCATAACGGATATATAAATCAGGAGTGATATAACCTGTTAAGCTGACTTGAGTATCATCACCTGTTCCTTGTGCATCTAATGCTAAACCACTTAGACCAAAAGTTTGTCCGATTTGGTTAGTAAAGGCGCGTGTTCCCCCCAAACCTAAACTAATTCCTGCAGCAGCAATGGTATTATTTACATCAGATTTAAAGCCCGCTTCATTGCTTAAACCGCTCGAACCTTCATTGATTCGTCCTGTGATTAAAGCATTCATCGCTTCTTGATCAGATAATCCTGCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1713645-1713196 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029397.2 Acinetobacter defluvii strain WCHA30 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1713644 28 100.0 32 ............................ GCTTGAGGGAATCAAAACATGGAAAGATGTAA 1713584 28 100.0 33 ............................ TTTGCTAAAGAGGGTTGGGAACGTCGTTTATAT 1713523 28 100.0 32 ............................ GCAAAAGATGTAACAAAATATATCGAGGAAAT 1713463 28 100.0 32 ............................ GGACGTCGGCTGTAAAGAAGCGCGTCAACTTG 1713403 28 100.0 32 ............................ AATACGGTCTAGTGATATGCAAATGACATGAA 1713343 28 100.0 32 ............................ CAGTGGACTTTTTATTTGTCAATGTTGCGAAA 1713283 28 100.0 32 ............................ AAAGACATTGTGACCTTGCAGAATCTTCGCAG 1713223 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : ATGAATGCAGCAAGCAACAAGGCAGCTTATGGTATTGAAACCATTGCACTGCCGAAAGATAAAAAGCTTGCACAGGATCTGTCAAAAGTTGTGGCCAAAGCTTTTAATTCAAAACTTCGTGGAGATGCCGGCTGGATTGATCAAAGTCAGTCAGCACGTGGAAAGCTTGGCTTTATTAGTAATGGTGGCTTGATTGTAGAGCTTGGTTTTATTTCAAATGACGCTGAGCTGAAAACTTTTAATGAAAAGTACTGGTTAGCTGCACGTGATATTGCGGATGTTTTGATTCGTCATGTGAAATAATACAGTTGTGTATGGTTTTTATGATAATAGCTTGTTAAATTAACTTATTGGGTAAGAGATGATTCTACCCAATATTTTTTGACTCTTTAATAAATTAATAAAATCAATGAGTTATAAGCATGGTTGAAAACTTAGGTATTTTGATATTTTAAGTTTTAACTCACTGTTATATCTTTGCTTTTTGCTATATTATTACT # Right flank : ATATTAAAAACCTTAACTTAACTAAAAATGGCTCTACGGAATAACGTGTGTAAAACTATCCTGTAGAGCTAGTTTAAATTTACTCATTCCGTGTGGAATCAAATCTATTTCTACACTGTTTACAAAGCAAAGTTGCATTATTTACAGAGTACTCTTTGTTTTTGTTTAACCAAGTTGCCATCAGTTCGGATGAATGAAATATACCCAAACAAGATTGGCAACGATATTCATATTTAATTAGCAAGAGATGCCTGATGTTTGCATAGTTTGTTCTTGCAGATATTACAATTGATGGGTCGTTCACTTGTTCATTAATGGCAACTATTGAACCAAGTTTTTCATAGTTAAAATGCTCTTCGCTTGGCATCTTTCTGAATAAAAATTTAGCTCTAATCATTTCATAGCTATACCCACGACCCTGCCTATTCATAACTTTAGCAACACCATTTAAAGCCTCTGTATAGCCATTAGTGATTCTATGATCAAAATAGGCTAAGAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 2247404-2245156 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029397.2 Acinetobacter defluvii strain WCHA30 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2247403 28 100.0 33 ............................ ACTATTACCAGTCGTACTTTCATACTGTTTCTT 2247342 28 100.0 33 ............................ ACTTTGATATTTATCCAAGTTTTGACCTGATTC 2247281 28 100.0 32 ............................ AAGAGCCTGAAACAACGTCTTGAACATTCTTA 2247221 28 100.0 32 ............................ TAAAGAAAAGTCATACAAATCCCATAAATCCA 2247161 28 100.0 32 ............................ AATAGAACGGCTACCGCAGGGAAAAGTATAGC 2247101 28 100.0 32 ............................ ATCCGCAGCATTAGCATTTGAAGTTGCAACAG 2247041 28 100.0 32 ............................ GCTAAGAATAAAAAACAAGGATATGAAGCGAT 2246981 28 100.0 32 ............................ AGATTATTCTCCGACGGAAGAAGATAAGAAAA 2246921 28 100.0 32 ............................ ATTAATCCATTTTTTACAGTCAGATTGTTTTA 2246861 28 100.0 32 ............................ CGACTCAGATATTGAGATTATGACGACTGGTG 2246801 28 100.0 32 ............................ CGACTCAGATATTGAGATTATGACGACTGGTG 2246741 28 100.0 32 ............................ TAAGCTGCAAGCGACTTATCAAGAGCGAATGA 2246681 28 100.0 33 ............................ CTGACGTACGCTTGTCCGATCTGCGGCACGTAC 2246620 28 100.0 32 ............................ ATTGGCATCTTTTGGCATTTCCACATACCAAC 2246560 28 100.0 32 ............................ AGTACAAGAATTTTCAGCAACTACAATAACCG 2246500 28 100.0 32 ............................ ATTGGTCAGCGTATTGATGTTGTGCAGTCTGA 2246440 28 100.0 32 ............................ TGCAAAAGATGATTCTAACTGCTCAAAAGGGG 2246380 28 100.0 32 ............................ TTTCGGATCGCCAGCAGGTCTATAATAAAGAT 2246320 28 96.4 32 ............A............... TGATTCATTTAAACGTAATACGGCAACGTATG 2246260 28 100.0 32 ............................ TCTTGTGGCAACTCTTGAAGTCGTAAATCAAT 2246200 28 100.0 32 ............................ GATAAAGCCCGTACTGCTTCACGTGTATTTGC 2246140 28 100.0 32 ............................ TGATAAACCTCAAGACTCTGCAACTTTGATTG 2246080 28 100.0 32 ............................ ATTGATAAAAGGCAGGAATACAAAAGCTACAG 2246020 28 100.0 32 ............................ TTTTCTATCCATCTTCTACAAATATCTTGTGA 2245960 28 100.0 32 ............................ TGTAAAAATAACGGGTATATCTTACTCGTCAG 2245900 28 100.0 32 ............................ AGATTTAAAGCGAGTTCTGATTTTCTTTTTAC 2245840 28 100.0 32 ............................ ATGTAGGATTTGGCTTGAGCTTCGGTGCAAGT 2245780 28 100.0 32 ............................ TTTAAATTTTTCTATTTCTCTTGCAAGTATTT 2245720 28 100.0 32 ............................ ACAATATCAAAACCATGACATTTATTTTAAGT 2245660 28 100.0 32 ............................ TTTAAGAAGAATGCTGAAATCTTTAGCAAGAA 2245600 28 100.0 32 ............................ GCTTTACGCTCAGCATCAGCCTTGGCTTGAGC 2245540 28 100.0 32 ............................ ACAAATTTTCTGTGCTGGTATCAGGTTGTATC 2245480 28 100.0 32 ............................ AGTAGAAACACCATAGCGCTTAAAACCATTTA 2245420 28 100.0 30 ............................ AAAAAACCGTTCTCAATAAGAACGGCTTCG 2245362 28 100.0 32 ............................ ATCATTACCTAGTACCAAGACAGTGCTTTCAC 2245302 28 100.0 32 ............................ CGAAAGTTTGTGCAACCAACATGGAATATTGA 2245242 28 100.0 32 ............................ TTTCAAAACCATGTGCTTTACCAAATGGCGAG 2245182 27 96.4 0 ........................-... | ========== ====== ====== ====== ============================ ================================= ================== 38 28 99.8 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GTTTTAGTGATTGGGGCATTTGTAGAAGCACGTTCTTGTGAGCGTTTTTATGCTTTAGCACCTTTGGTAGATGAGGAGCTTGGACGTTATTATCGTTATTTGCTCAAATCAGAGTCTCGCCATTATGAAAATTATTTGGCTTTGGCATTGGATGTGGCGAAGACGGCTAAGCTCAAAGACCCTGAAGAGGATATTCAGCAACGGATTGCGGATATTCGTGAGGTTGAAAAGAATCTGATTTTGGCAACGGATGATACGTTCCGTTTTCATAGTGGTGTGCCTGAAAAAGCTTTAGCTTAAAGTTAGTCGATTTTTAAAGAAAGGAAGTGTTTATACTTCCTTTTTTATTTTGACAAATGCAGGTTTTTACCCCAATATTTTCTTGCTCTTTAACAATTTATATAAATCAATGACTTATAACTTGAATGAAAAACTTGGGTAATTTTGATTTTTTTAAATTAACTCTATGTTTTTATTTTGTTTATGGTTAGAATTTTACT # Right flank : TAGTAGATAGTACAATTATTATTGAATTACTATACAAGTTAAATCCGCTTTTTATTATTCAATATCAAGGCATAAAAAAAGCCCACTGCATAATGAGTGGGCTTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGAGTGCGATTATAAGGATATATCTGGGCTGGTCAAGCCTTTCATGTCATGTTTTCTTCATTTTTGAGTTGTATGCTTTTTATTTGAACAAAAATATCTTAATTCAAAAAAAATATATGAAATGGTTGCAATCCCACAAATGACTTGCTAGATTAAATTTAGAAAGTGAGTTTAAGCAACTGCTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGAATGAATACGCTCAGCATTTCCGATATTTTTTCAAATTTATCTTTTTACCAAGAAAATTATCTTTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-85.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //