Array 1 2802296-2797495 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043306.1 Cellvibrio japonicus strain ADPT1-KOJIBIOSE chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2802295 32 100.0 35 ................................ TGTCGCAGAAAGTTTTTGATAATTCGGACATGAAA 2802228 32 100.0 34 ................................ CTCAAGAGCATCGTGAGGGTTGTCTTCGTAGCAC 2802162 32 100.0 34 ................................ AGCCAATTTGAATTGATTATTCGCGCAGCGGAAG 2802096 32 100.0 33 ................................ TGCCAGCCGGGCCAACAGCCGATGGCCCTACAA 2802031 32 100.0 33 ................................ AGCAAGTTTTTTGTATGTCAAAGCCCCGTTTGT 2801966 32 100.0 35 ................................ TCGGCTATATCGTTCGCCCCACTCACACGCTGGTA 2801899 32 100.0 34 ................................ CCCTGGATGCGATCACTGCTACGCAGAGTCAATG 2801833 32 100.0 34 ................................ AGACTGGCCTCAGCATGTGCGCTGATAATCTCGG 2801767 32 100.0 34 ................................ GTTATTGGGACAAGGCAGGAACAGATGGTGGTGG 2801701 32 100.0 34 ................................ AACGCCTGGCGGTACGATGGTAACTATTCATCCA 2801635 32 100.0 34 ................................ GCGCTCTTGGTATTTGGCTATACAGTAAAGCGGG 2801569 32 100.0 35 ................................ AAAAACTGAAGTACGGACATTAACCACCTGGGAAA 2801502 32 100.0 35 ................................ TGCTATCGTAAAAGTTCTACCTTGCAATGCCGCGC 2801435 32 100.0 34 ................................ TTTATCCATCAGAAGAGCTCTATTAACGGATTTA 2801369 32 100.0 35 ................................ AAGGTCAGGACGACCAACTTCACGCCCAAGATAGT 2801302 32 100.0 35 ................................ AATACTATGGCCATCAATTTCTGCTGTTTGCCTTA 2801235 32 100.0 34 ................................ AATGTTAACAGAACAACAAGTATCGCATTGTTCG 2801169 32 100.0 34 ................................ TGCATCTGTAGCAGCGTCTTTAACTTCAAGAGAA 2801103 32 100.0 34 ................................ AAGCCACCGGTGTGCAACTGTGGCAAGAGCTCCT 2801037 32 100.0 34 ................................ AGCGGGTACTACAACCAGACAGGTAACACGGAAG 2800971 32 100.0 34 ................................ ATCGTGCACAAGAAGTGGTAGCGCGTCCGATCTG 2800905 32 100.0 34 ................................ AAAAGCATTTGCTTGGCGCGAAGGTATGTTTCAG 2800839 32 100.0 35 ................................ AGCCGCACCGGTGACGAGTCAATAGCTGAAGCCGT 2800772 32 100.0 35 ................................ AAGTTCTGCGACCGCAGCAATACCAAGCATTCCGA 2800705 32 100.0 35 ................................ ATGCGATTATCGGCAAAGCGACCGAAGCGGGCGAA 2800638 32 100.0 33 ................................ TCAGAAAGGCTTGGAGTTAGGGCAAACCTAAAG 2800573 32 100.0 33 ................................ TAACGCCAAAAAATCTTTAAGCGATCTTGGTGG 2800508 32 100.0 33 ................................ ACTGCATCGGTAACACTAATATCGATCCCCTTG 2800443 32 100.0 35 ................................ AGTGACCCTATATCACCCTCTGAGCCCGACACCTG 2800376 32 100.0 34 ................................ CGCACAGGGTTTCTGCGGCTGCAGTCTCTACCAG 2800310 32 100.0 33 ................................ TGTATTTCAACAACAACAAAGATCCGCTTGTAA 2800245 32 100.0 34 ................................ ATTAATATTGAAATTGACACCAAGGGATAAGAAA 2800179 32 100.0 34 ................................ TTGCCTCTCTTTAGCTGCGAATCCCTGAACACCA 2800113 32 100.0 34 ................................ ACTTGTCGAGCCCCCACACCATACGCGCATAAAT 2800047 32 100.0 34 ................................ ACCATGAATCAAATGCGTAATGTCATCCAGCCGG 2799981 32 100.0 34 ................................ ATTCTTGTGCCCAGTGGCCGTGTTATGGATACGC 2799915 32 100.0 34 ................................ ATCCAGCAAATAGGTAGCCTCTTTGGGTACATGT 2799849 32 100.0 34 ................................ CCGCTTGCAGTGCAGGAATCAATACACGCTGAAC 2799783 32 100.0 35 ................................ CCTGTGACATCACCAAGTTTTCTCTGGTTAATGTG 2799716 32 100.0 34 ................................ AATGCCCACGCCACCAGGCCAACGGCCACCACAC 2799650 32 100.0 34 ................................ CAGGGATTGGCCAGATCGATAGCCGCGAACAGAT 2799584 32 100.0 34 ................................ AGAATAAACATACCCTACCCCTTAAACACTTTTG 2799518 32 100.0 34 ................................ TGCCATGTCTGCCGCTGAGCGTAAACGCGCACAA 2799452 32 100.0 35 ................................ AGGAGGTACGTCATCGATCATGTAGAGGAATTGCC 2799385 32 100.0 34 ................................ TTGTTGTTGATGTTCTGGTTGCCATCGCTAAAGT 2799319 32 100.0 33 ................................ GGTCTACCTGGAGACAGGCACGGCGGATTATAA 2799254 32 100.0 34 ................................ CAGGTGAGTGCAGACGGCTCACCTGGGTAGCGCA 2799188 32 100.0 34 ................................ TGCATATCAGTCACGCGTAGAATCATTAAAGCGC 2799122 32 100.0 34 ................................ ACCGGTATATCTGTCGGTGCGGTATTAACCCGAA 2799056 32 100.0 35 ................................ TTCATGTATGGGTCGGAGTAAATCGAAATTGGATA 2798989 32 100.0 35 ................................ ACAGCTTTTGCAGCATTTGCCAGCGGCTTGATACC 2798922 32 100.0 35 ................................ AGGCGTTAATTGATTATTGGCAGCCGCCATGATTG 2798855 32 100.0 34 ................................ GTAATAAAAACGACTACCCGACAGTGATACGGTT 2798789 32 100.0 35 ................................ CTACAGGTCGAGTAGTCTATAAAGCGCGCCAAGGG 2798722 32 100.0 34 ................................ CGGCTAATTTTGCCGAGGGCAAAAAAGCGCAGCG 2798656 32 100.0 34 ................................ GACTCGGCGAGATGTTAACCTATCTATTGATCGA 2798590 32 100.0 34 ................................ ATAGGTGGTGTTGCTCTCTGCCCTGAATTTAATG 2798524 32 100.0 34 ................................ AGGGAGCAAAGTGGCCCTGGTAAAGCATCAAGAA 2798458 32 100.0 35 ................................ CTGTGGATGAAAGCTGAAAGCACCGGATGTTGTCC 2798391 32 100.0 34 ................................ AGATATTCGGTGACAAACGTGGATTGCTTGGCGG 2798325 32 100.0 34 ................................ TCCACGCAAATTTGTTTTGCGTTGCAGTCTAAAA 2798259 32 100.0 36 ................................ GAGAACTACACCCGTACAGCGCAGATCCTCGCGGAC 2798191 32 100.0 35 ................................ TCGTTCCCGCAGTCGCATCTAGCCCACCACAGGTG 2798124 32 100.0 34 ................................ TCAACAATTGTTGGTACCGATGCCGAGCGGGTGC 2798058 32 100.0 34 ................................ ATATAACACCTCAAAGGTTGGCAGCTGGTTATGC 2797992 32 100.0 34 ................................ AGCCAGCATTGCCCCTGTACGACTACCAGCGCCG 2797926 32 100.0 34 ................................ TGCTCAAGGGTAAAGGTTCGCTTACGCGGCATCG 2797860 32 100.0 34 ................................ ACTCAATGAGCATCTGCACCAGCAGTTAAACCCA 2797794 32 100.0 35 ................................ CGCTCACGGGGTCCCGCGCCCAACGGCGCTCCCGG 2797727 32 100.0 33 ................................ AAAACCGGCCAGGAAGAAACCATCTGCCGCTGC 2797662 32 100.0 36 ................................ GAGGGTATCGAGCAGAAAGCCCGGTCGTTGATTACA 2797594 32 100.0 34 ................................ TTGTACTGCGCGAGCCGTGCGAGCCAGTTTCAGT 2797528 32 87.5 0 .........................G..GT.T | T,A [2797499,2797501] ========== ====== ====== ====== ================================ ==================================== ================== 73 32 99.8 34 GTCGCGCTCTTCGCGAGCGCGTGGATTGAAAC # Left flank : TACTCCATACCTCGTAAAATAGGAGGGATTGTGCTGGTATTAATAACCTACGATGTGAGTGTAACCTCTCCAGGAGGTAGTCGCCGCCTGCGTAATATTGCGAAAACATGCCTGGATTACGGTGTTAGGGTTCAGAATTCTGTTTTTGAATGCGAAGTTGATCCAGCTCAGTTCGTCAACTTAAAAAATAGTCTTGTGGAAACTTTTGACCCTAACGAAGATAGTCTACGGTTTTATTTCCTAGGAAAAAAGGGACATCAAAAGATAGAACATATTGGTACGAAATTTGTACAAGACCCTCTCCGCACCCCTCTTATTCTTTAGTCCGCTAATCTATGGTTCTCACAATTTTCCCAGTAGATTAGCGGACTCTTAACTTGTTGATTTACAAATATAAATTTAATTCAATCTGATTTGATTTAATCCAATCAGAAAATATATCCCTGGTTAGCGGAATTTTTCAGTTTTCTTTTTATTTACCAATAGGTTACCTTAATGCA # Right flank : TTAATTGGCAGCTATTACCCTATCCCTCTCCTGCTCTCTTACAAACTCCTCCCGCAATTCCCTGGCTGCTTTCACCATATTCACCAGCGCAGCTTCTGTTTCTGGCCAGCGGCGGGTTTTTAGGCCGCAGTCGGGGTTTACCCAGAGGCGTTCTGTGGGGAGCTGGCGCGCGGCGCGTTTGATGAGTTGCACCATGCTGTTGACGTCGGGGACGTTGGGTGAGTGGATGTCGTATACGCCTGGGCCTATGTCGTTGGGGTAGTTGAATTGTTCGAAAGCTTGCAGCAGTTCGCCGTCGGAGCGCGAGGTTTCGATGGTGATGACATCGGCGTCCAGGGCGGCTATGGCCTGGATAATATCGTTGAATTCCGAGTAGCACATGTGGGTATGGATTTGGGTTTCATCCTGTACGCCGCTGGCGGTGATGCGGAATGCTTTGACGGCCCAATCGAGATAGGCGCGGCGATCTTTGTCGCGCAGCGGCAGACCCTCGCGAATCG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCTTCGCGAGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCTCTTCACGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.60,-5.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //