Array 1 785796-784742 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KK354051.1 Mycobacterium tuberculosis UG-D adhIe-supercont1.2, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                          	Insertion/Deletion
==========	======	======	======	====================================	=========================================	==================
    785795	    36	 100.0	    38	....................................	TTAAAACCGTGTTGCACTGCAACCCGGAATTCTTGCAC   	
    785721	    36	 100.0	    41	....................................	CATAGAGGGTCGCCGGCTCTGGATCACGCTCCCCTAGTCGT	
    785644	    36	 100.0	    36	....................................	TTTTTGCCTCATGCTTGGGCGACAGCTTTTGACCAA     	
    785572	    36	 100.0	    34	....................................	TCGCAAGCGCCGTGCTTCCAGTGATCGCCTTCTA       	
    785502	    36	 100.0	    36	....................................	TTCGTCGACCATCATTGCCATTCCCTCTCCCCACGT     	
    785430	    36	 100.0	    41	....................................	TTGCGCCAACCCTTTCGGTGTGATGCGGATGGTCGGCTCGG	
    785353	    36	 100.0	    24	....................................	CTTGAATAACGCGCAGTGAATTTC                 	Deletion [785294]
    785293	    36	  94.4	    36	.CG.................................	ATTCGCACGAGTTCCCGTCAGCGTCGTAAATCGCCA     	A [785289]
    785220	    36	 100.0	    37	....................................	CCGGCAACAATCGCGCCGGCCCGCGCGGATGACTCCG    	
    785147	    36	 100.0	    36	....................................	CGCATGGACCCGGGCGAGCTGCAGATGGTCCGGGAG     	
    785075	    36	 100.0	    36	....................................	TGGATTGCGCTAACTGGCTTGGCGCTGATCCTGGTG     	
    785003	    36	 100.0	    41	....................................	TCCACATCGATTTCCTTGACCTCGCCAGGAGAGAAGATCAC	
    784926	    36	  97.2	    40	.........................A..........	TCGTCGACGATCGCGTCGATGTCGATGTCCCAATCGTCGA 	
    784850	    36	 100.0	    37	....................................	TTGGAGCGTGTCACCGCAGACGGCACGATTGAGACAA    	
    784777	    36	 100.0	     0	....................................	|                                        	
==========	======	======	======	====================================	=========================================	==================
        15	    36	  99.4	    37	GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC	                                         	       

# Left flank :   TTCAGTACGCCCTCGACTTGCAACTGCAAAGCCTCGTGCGTGTTATCGAAGCCGGGCACCCGTCGCGGCTCGTCGATATCGATATCACCTCCGAGCCATCCGGAGCCTAAATGCCCACTCGCAGCCGTGAGGAGTACTTCAATCTCCCGCTCAAAGTGGACGAGTCCAGCGGCACTATAGGCAAGATGTTCGTCCTCGTAATATACGACATCAGCGACAACCGGCGGCGGGCTTCACTTGCGAAGATCCTGGCCGGGTTTGGCTATCGCGTCCAAGAGTCCGCATTCGAAGCGATGCTGACGAAGGGCCAGCTCGCGAAACTAGTTGCACGTATCGACCGCTTCGCCATCGACTGCGACAACATCCGGATCTATAAGATAAGAGGTGTTGCGGCAGTTACGTTCTACGGAAGGGGACGGCTTGTCAGCGCAGAGGAGTTTGTGTTCTTTTGACATCATCAGCAGGCATTGTTACCACACGCTGGACGAATTGTCCATAGA
# Right flank :  CCTCAGCTCAGCATCGCTGATGCGGTCTGAACCGCCCCGGCATGTCCGGAGACTCCAGTTCTTGGAAAGGATGGGGTCATGTCAGGTGGTTCATCGAGGAGGTACCCGCCGGAGCTGCGTGAGCGGGCGGTGCGGATGGTCGCAGAGATCCGCGGTCAGCACGATTCGGAGTGGGCAGCGATCAGTGAGGTCGCCCGTCTACTTGGTGTTGGCTGCGCGGAGACGGTGCGTAAGTGGGTGCGCCAGGCGCAGGTCGATGCCGGCGCACGGCCCGGGACCACGACCGAAGAATCCGCTGAGCTGAAGCGCTTGCGGCGGGACAACGCCGAATTGCGAAGGGCGAACGCGATTTTAAAGACCGCGTCGGCTTTCTTCGCGGCCGAGCTCGACCGGCCAGCACGCTAATTACCCGGTTCATCGCCGATCATCAGGGCCACCGCGAGGGCCCCGATGGTTTGCGGTGGGGTGTCGAGTCGATCTGCACACAGCTGACCGAGCTG

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,12] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.40,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [36.7-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,1.42   Confidence: HIGH] 

# Array family : NA
//