Array 1 21684-23039 **** Predicted by CRISPRDetect 2.4 *** >NZ_MBFG01000013.1 Nosocomiicoccus ampullae strain LUREC Nosocomiicoccus_Contig_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 21684 36 100.0 30 .................................... AGAAGCGTTCGGAGCGTTCTTTGTGCATAA 21750 36 100.0 30 .................................... TTGAACATGAAACATTAAATGCTACATTAA 21816 36 100.0 30 .................................... TTACTCACGATGATATTCACTCGATGCTTA 21882 36 100.0 30 .................................... AATATTGAGTTAACGAATTAAGAAAGGATG 21948 36 100.0 30 .................................... TTCTTCGTGGAAGATATGGACACGAAACCA 22014 36 100.0 30 .................................... CACTAAAGACCTATCGGGCAACTTGAAGAA 22080 36 100.0 30 .................................... AATAAAAAAGTTCGTCCCAACATTTCCCAA 22146 36 100.0 30 .................................... ATTATTTTAAGAAATTTGAAGAATAGTGTA 22212 36 100.0 30 .................................... TTCCATTTTCTCTTTGTTCTTCTCGCCACA 22278 36 100.0 30 .................................... CTATTTAACTTAAATCTGTTTCTATCGAAT 22344 36 100.0 30 .................................... AGGACCACGAGACCTTGACACAAAAAAACA 22410 36 100.0 30 .................................... GAAACGTTATTTATCAATGATGGTGGAGAA 22476 36 100.0 30 .................................... CGTTTTCAAATGGCATATATATCCATGTCG 22542 36 100.0 30 .................................... ACGTACTTCATTTTGTGTTTCTAAAACTAA 22608 36 100.0 30 .................................... GGTGATGTAAACGACACGATTATCGAAGGG 22674 36 100.0 30 .................................... CCACAGCTTTCCCAATTTTTTCATTTTAGT 22740 36 100.0 30 .................................... TTGCAAATGGAATTTCATTACAACAAACAT 22806 36 100.0 30 .................................... TAAATGTTTCTGCTTCATACACACCATCGG 22872 36 100.0 30 .................................... TCTACCCGTATCTTTTAGTTACAAATAGCT 22938 36 100.0 30 .................................... TTCTTCACTTAATTTAGATAAAAAATAGTG 23004 36 91.7 0 .............................GGT.... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 99.6 30 GTTTTTGCACTCTCGATAATTGCTTATCAATAAAAC # Left flank : TAGAAAACAGCAGTAAGATGCACTGGATCGTATTAAATAGTCCAGAATCAATCTTTAGAAGCGAAGCATTTTATTATTTCTACAAGAAACTAGAAAATGTAGCGCAAGAGACAGGACGACTTAAAATAATTGTATTACACTATCGTGCTGTACCTTATTACGATCTTACAGATATAGAGTCTATAGTACTCGCATTTAACGGGTTCCAACAATTGCCAGATATCGATTCATTTTATCAGTCCATCGAGAGAAACTATCCATGTAAATTAGTGGAAAGTAAAGTCGACGTTTTAAATTCGTTCTTTAGAGTATGTAACTTTATAGGAGATTATAATCGTACATATTATTATCTAATGCATAAAGATATGGTATTATTGTATGTATTGAGAGATATACTGAATGACGATTCAGATTTTGAAGTTGAAAATAGAAATATTACAACTTTAGAAGAAAAATATCTCAAAAGCAAAGGATTTCGGATGTAAAAACCTCTATTTGAG # Right flank : CAACTATCAACTTGATAATTTGCGATCGTAATCCTGATGTCGCAAGTTATTGAAGAAAGGGAAAGATATTATGTTAATTAATGCAACTATTATTTTATGTCTAATCGGTAAATTTCTAAAAGATGAACCTATTAAAAAAGCAAATAACTTTGCAGGTTATAGAACTAAGAAGGCTTTGGCTGATGATCATAATTGGGTTCTCGCACAAAAGACAGCTTTTGAATTGATGTATAAAATATTCTTTATAGTTTCAACTATATTTGTACCTTTTATCATAATCGATATTCTATCGTTAATAGGTCTATTAAGTGACTCCATATTTACATGGTCTATAATTTTCCAAAGTGCAAATATTGTTGTTGGATTTATACTGATAATTGTACTGACAGAGAAAAAATTAAGTGCTTACGGGGTTAATTAATGAAGATAATGTACCAAATTACATCAAGCATATGAATTAAAACAGTATTACTATAATACTTATAATATAAAACTCCGTT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGCACTCTCGATAATTGCTTATCAATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //