Array 1 6456-7033 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHOFE010000034.1 Bifidobacterium longum strain MSK.20.96 NODE_34_length_7845_cov_371.316, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      6456	    29	 100.0	    32	.............................	AACACCCAGCAAGTCGAGGATGAAGATCGGAA	
      6517	    29	 100.0	    32	.............................	AAAGCCGTTGCCGAAGAGTTTGACGTCCGCGA	
      6578	    29	 100.0	    32	.............................	AGGATGAACGGGATATCTCCACAGATTGCTAT	
      6639	    29	 100.0	    32	.............................	CATTCTCCCGTAATAGAACGTCTTCTGAATGG	
      6700	    29	  89.7	    32	..........C..A..............T	TGGCGGGACTGCTTTGCGCCGGCTTTCTCGAA	
      6761	    29	  93.1	    32	..........C..A...............	GTGGTGACCTGATGTTGTTGCAGGATGTCGAG	
      6822	    29	  89.7	    32	..........C..A........C......	TGTATGAGTCTCGAACAGTGAAGCGTCCCGTG	
      6883	    29	  86.2	    32	..........C..A...A..........C	TGGTCCCGTCCTCCTAAGCGTGAAGCGCATAT	
      6944	    29	  89.7	    32	..........C..A..............T	AAGACCCTGTACCAGTTCACGATTGATGCCGC	
      7005	    29	  96.6	     0	.....A.......................	|                               	
==========	======	======	======	=============================	================================	==================
        10	    29	  94.5	    32	ATCTACCCCGTACGCGCGGGGATAAACCG	                                	       

# Left flank :   AGCGACCTCGCAGCCCTCCGATTCGGCGTGCAACCAGTCCACACGGGCCCACGGTTGACGGACTTCCAAACCATGGGTAGACGAGCGGACGGGAAGCCCAACCCGTTGGAAACGAAGGAATACCTACAGGATTCCACGTTCACTGTCGGGTTGGAGTCCAACAATCTACGACTCCTGCGAACAATCGGCGCCGCTATCCAACACCCCGTATACATGCCGTACTTGGGACGACGCGCCTGCCCGCCAGCCGGCCCTATCCGAGTCGGACTGGTAGACAAGCCGTTGGAACAGGCGTTCAAAGGCAAGGAACAGGCGCACGTCGAAACCATCGATGGCACGGAAGCACACTGGGATCAGCCGGCCAACAACCGAGTATTCCAGGCACGCTACTCCAATGCTATTGACCTGTTATTCAATGCGGTAGCCGAAGCGCAGAATGACTGAGCGAATCAAATATTTTCCGTACTCATGCAGTCGCGAAATCCTTTGAGAATGCAAGT
# Right flank :  GGAGCCTTTCTTGATCACGGGCACCCTCGCATCATCTACCCCGCGCATGCGGGGATGGTTTATTATATGTTTTTTCCCATTTACCTGTTATACTGAATACGTTCACATAGAAATGAAAGAGGAAAAAACAATGAGCCCTTCGGAAGCCAGTGCCACGAAAATCCCTGCCACCTCCATAGACCGGCACTAATTGGAGTGGGGGGCAAAAATGAATCATCCAGATCAACTCAGCCGTGAATATGCGGCGATCCTTCCCGCCTTGAAAGACCACGGCTATCGAGCCGACGTGAAAGCAAGCATCGCCGACGAACGTTTCATCTTGGTCGTCAGCGGCAAACCCACCACAAGAATCTACCGGGACGGAGGATGGGTTCGCGACGATGGTGCGAGAGGATCCACTCCAGCCGACCTACTCAGCTTCTACAAGCATGAGCATTACACGGAAGCCCTGAAACATTGGACGAACAAGGATTGGCGTGGAATCGCCCGTGACCTGCTAA

# Questionable array : NO	 Score: 2.67
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATCTACCCCGTACGCGCGGGGATAAACCG
# Alternate repeat :   ATCTACCCCGCACACGCGGGGATAAACCT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-10.60,-8.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-13] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.42,0   Confidence: HIGH] 

# Array family : NA
//