Array 1 454778-455139 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVK01000002.1 Caminibacter pacificus strain DSM 27783 Ga0244704_12, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 454778 30 100.0 36 .............................. TTTTAAGAGCGCCTTTTATTTCGTCGATGTGTTCGT 454844 30 100.0 37 .............................. TTGACCTTGATTAAGGGGTGTATATGAGTTTTATAGT 454911 30 100.0 36 .............................. AAAAGACGGGCAAGAGTTTACGGAGGCTTTTGAAAT 454977 30 100.0 36 .............................. TTAAAACCAGGCGCTTTTGCCGAGTCTTTAAAAGAC 455043 30 100.0 37 .............................. CAAACACTGCTTTACTAAAAAGCAGCTTGAAATTTTA 455110 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 100.0 37 GTTTCAAAACATCTTGTGTAATTGGTTGGT # Left flank : TATAATAGATGTCCGATATGTGGAATTTATTTAATCAGAGAAGAAAATTTAGTATGGTGTCCTAATTGTGGATATGAACCTTATTAATAAATTTAAATTGTAAACACTAATGATAAGGAGAAGACATGGGATGGAATAAAAAACATGAAAGAACAGATAAACAAGGCGGAACTTGGAGAACATATGAAAATGAAAAAGGTGAAAAAATAGTGATAAGAACAAATCCTAATGGTAGTGAGAGTGTATTTAAGGATGGGAAGAAAGTAAACAAACAAAAATAACTTTAGTTATTTTTGTTTATCTTATAATTTATAATTCTTCTTTATCTCCAAAAAGGTGCGTCCATTCAATAAAAAAGCTATTTTTAGCTGTGTTATAACTAATCCCAGCGGTTTTTGCTACTTTGTATGGTGTTATTTCTTCTCCTTGAAGTTTTAATAAATTAACTGCGTTTATAACTTTTTCTTTTGATGCTGCTGCTCTCTTAGCACTTTCTTTTT # Right flank : TACATTAAATTTCGGGCTTTTTAAATTTCCGATACCGCATTTACGGTACGTGCCCAGTGATTTTTAAAATTAACAAAAAACTGTCAAAAATCTTTTTATCTTCCCGATTATAGCGCATTTTTTTATTATTTGCAATATTTACTCACCAGGACAAATTGCTCTTTTTTTGTAAATATTTTATAATTTCCCAAAAAGGCGGTAGATGAAAATAGCCCTTCACGTTCCGTGTTACATAAATGAGCTAAACCCCGAAATTGCCCGAAAAACTCTTTTAATTCTCAGGCATTTCGGATTAAATGTAAGCGTCCCTAAAAACCAGACGTGCTGCGGACAGCCTTTTATTAATTCCGGGCAGCCTACAACCTTGCCCGAGCAATTTAACGAAATCTTTAAAGATTACGAATATATCGTATCTCCAAGCAGCTCGTGCACTTCTACGATTCGCTCTCAAGAACTTGAAGTTAGCAAAAAAATGTACGAATTATGCGAGTTTTTGCACG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAAACATCTTGTGTAATTGGTTGGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 62-418 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVK01000001.1 Caminibacter pacificus strain DSM 27783 Ga0244704_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 62 37 100.0 42 ..................................... CTTCCTTTACCAAAGAAGCACCTTGAAGATATAACTTTCCTC 141 37 100.0 41 ..................................... ACTAAAAGTTATAGATAGCATCATTGCCATAGTAAAATAAG 219 37 94.6 46 .........T............G.............. GCTACCAGGACTACTGCCATATAAACAGCTGTAACAATCCCCGCAG 302 37 100.0 44 ..................................... GGGAAACCAAGTTCTTCTGCCAGGATTTTTCTATATTTGTTTAT 383 36 81.1 0 .........T.....T.....G..C.A....-....T | ========== ====== ====== ====== ===================================== ============================================== ================== 5 37 95.1 44 ATTTTCTACCTTCTTGGGTAGAAGGTTAATTGGAGAC # Left flank : AGAAGGTTAATTGGAGACTAAATAAAATATAGACAGGTTTATCGTTATAGAATTATCAAGAA # Right flank : TTTGTGATTTACCATTGATGTTTTTTTGTTTTCTATTTTGATTAGTAATTACATTGAAACTAAAAAAACAGTTTTGTATTTTCAAGAATTTCTCCCGTCATTGGAAATGATTGGCTTAGTTGATGAAAGATTTAATTTATTTTTGTGAGTTAAGGAGAAACTTTTTTTAGAGGAATAGATTTTATTTCATTAAGGATAGATTGTCTTGGATTTTTGGGGTCTATGTTTTTTGGGCGGTATTTTTTATCCCAAAGGTTGTGGGCTTTTATCCACTCCTCGCAGCAGTTTAGATTAAGTATGCTGAATGTTTTTAGAGGGTATTTTAGCGCAAGTGCGAAAAGGAATCTATTGGTAACTGTTTTAGGGCATTTTTTTATTTTGATTTCTTTTTTTAATCTGTTGGGAAGGTTTAAGGCCGAGATTACTTTTTCGTGGTTTAGGTGTTTGTAGTAGATGAGGTGATATAAAAAAAAGCTCTCAAGAGGATTGTTTTTATAAAG # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTCTACCTTCTTGGGTAGAAGGTTAATTGGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.20,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 518265-516393 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVK01000001.1 Caminibacter pacificus strain DSM 27783 Ga0244704_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 518264 30 100.0 37 .............................. CCAATTCTTGCATTACGAGGTATTGCTATATCTTTAT 518197 30 100.0 36 .............................. GCTGTAAGGTTTTCGACTTTGTCTGTTGCGGTTGTA 518131 30 100.0 38 .............................. TTTTTTATAAGTTTTTCCGTGTCTTTGTTCCCGAGCAA 518063 30 100.0 37 .............................. AGATTATGTTTAAACTCTTTCTCAAAAGTCTGCTCGG 517996 30 100.0 37 .............................. ATATTCCCTAACGGGGGTTGAGCCTGAACTTGAAGGC 517929 30 100.0 37 .............................. TTTCGTATTTTAATTTTTCCAATTTAACTCCTTTTAA 517862 30 100.0 34 .............................. AAAGCAACAGCGTCAAGCTCACTCAAATCAATCG 517798 30 100.0 34 .............................. TCTTAGAATAGGCAGTTTTAACGTACTTTTTAAG 517734 30 100.0 36 .............................. TTATAATCTAAAGACTTAGTTAAATACTTAGTAACA 517668 30 100.0 38 .............................. TAGTCAAATCTCCAGCTCTTTACATCTTCTTGTGTTAT 517600 30 100.0 34 .............................. TTTAGAAATGCTTGGACTTGACGAAGAGGGTCGG 517536 30 100.0 34 .............................. TTTGAAGAGAGCTACGAACAAATTTCTTCCCTAT 517472 30 100.0 34 .............................. GTTTTAAGCGTTTCATTTTCTTTTTGCTTATTTA 517408 30 100.0 37 .............................. AGGAAGGAGAAGTCGAGATAATTAATGCAGGAGAAAA 517341 30 100.0 38 .............................. CCAAAAAGAGATTAAGCACCCTGAATTTCCCGTTGTGG 517273 30 100.0 35 .............................. TACGCCTGTCTTTCGACTTCTTCTTTCTCAACCAC 517208 30 100.0 35 .............................. TAAACGCATATGCTAAAAGAAGTAATGCCCTTTCC 517143 30 100.0 38 .............................. AGATTATAAAAAGCAAAATCAAAATTATCATTAAAAAT 517075 30 100.0 34 .............................. AATTTTTTACCATATGTAAAGTTATTTTTAAAAA 517011 30 100.0 34 .............................. TCGTTTTAAGTATGTTACACTTCCTTCTGGTAAA 516947 30 100.0 36 .............................. TTTGCATTTAGTGCTTTTTGTTAATACTAAAAATAC 516881 30 100.0 34 .............................. TTTGAAGAGAGCTACGAACAAATTTCTTCCCTAT 516817 30 100.0 34 .............................. GTTTTAAGCGTTTCATTTTCTTTTTGCTTATTTA 516753 30 100.0 37 .............................. AATAACTTGGATTCCGAACGGTAATTTAGATTGTCTA 516686 30 100.0 36 .............................. TCTTTAGCCAAAAAATTATGACACTCATCTAGAACA 516620 30 100.0 36 .............................. ATAGCCCTTAGTGCGTCATTTTCATACTCATTTTTT 516554 30 100.0 36 .............................. AACACGGCAAGGGATTTGCCGCTATTTGTGTATTTA 516488 30 100.0 36 .............................. AAAGAAATTGTAAGAGAAAAAATTGAGGAGGTGCTA 516422 30 96.7 0 ..................T........... | ========== ====== ====== ====== ============================== ====================================== ================== 29 30 99.9 36 ATAACACCGATACATTTGGAGTATTGAAAT # Left flank : CCTGCTGGAAAATAGAGAGTTTGTTCCTTTTTTGATTAAGGAGAAAAAATGAAAAAAGATTATAAGATTAATTATGTGTTTTTGATGTATGACATTGCTGATGAAGAGAGTGAAGCTGGAAAAAGAAGAGTAAACAAAGTTTTTAAAATCTGTAAAAAATATCTAACTCATCATCAAAAATCGGTTTTTAGAGGTGAAATCACTCCAAGCCGCCTTTTAAAACTACAAAAAGAATTAAAAGATGTAATAGATGAAGAACTGGATTTTATTACAATTATAAAACTTAAAAACAAAGAAAGCTTTTTGGAAGATACAATTGGCAAAAAAGAAAACGATATGTTTATTTAATTTTCCAACCTCTTTTTATTGACAATCTTTTAAAAACTTCGATATAATCGTAAAAATAAAAATTTTTTTGACAATTTAATGTTATAATTGTTTTGGTTGGAAAAAGGCGATAAAATCGCATTTTATATATAAAAAATCCCAAAATTCAATGT # Right flank : GTTAGAGTCAGAGAGCTATTTCTAAAAAAATAGACTTTATTATTTTTCTTTGTTACTATTGTCAAATAAAATATATTTTAGGGATTTTTATGAAAGATATTGTAAAATTTATAGACGGGGAAATTGAGATTGAGACAAAAGTGGAAAACGAAACGGTATGGATTACGCAAAAGCAGATGTGTGAGCTTTTTGGAACTGCAAAATCTACTATTAGCGAACACTTAAAAAACATTTTTGAAAGTGGTGAATTAAACAGAGAATCAACTGTTCGGAAATTCCGAACAGTTAAAATGGAAGGAAACAGAAAAGTTTCAAGAAATATTGAATATTACAATCTTGACGTAATAATCTCGGTGGGATACAGGGTAAACAGTAAAAAAGCAACGAAATTCAGACAATGGGCTACGAAAATTTTGAAAGATTATATTTTAAAAGGATATGCTCTAAATCAAAAAAGGTTGGAGCAAAACTTTAATGAATTTAAGCAGGAAATTGAGCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAACACCGATACATTTGGAGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 71822-72970 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVK01000005.1 Caminibacter pacificus strain DSM 27783 Ga0244704_15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 71822 30 100.0 36 .............................. TATACAAATTATACAGCTAAATGCATAACAGTATAT 71888 30 100.0 35 .............................. AAAGCAATCATCCACGCCGTAGCTTCTTTTACTTT 71953 30 100.0 36 .............................. AGGAATTCGGTGTTAGTTTTAGAACTATACAAAGAA 72019 30 100.0 36 .............................. CTTAATTCTTTTATTACTTTTTTCATTTTACTCTCC 72085 30 100.0 37 .............................. GCTAAAAAATTCGTAGACGGAATCGACTTTTCTAAAA 72152 30 100.0 36 .............................. TCGAGCCAATCAGGAGAAAAAATGCCGTCGCCTTCT 72218 30 100.0 36 .............................. AGCGTTGAAGTAATTGTTTTGAATATCGATAGCCCG 72284 30 100.0 37 .............................. TTTCCTTAACTTCCGAGCTTAATACTTTACCGACAAT 72351 30 100.0 37 .............................. ACGCTATTTTTGACGCAAAAAATGAGTATGAAAATGA 72418 30 100.0 36 .............................. CTGCTTTAATTAAGTTTTGAGCTTTTTTTAGCTTTT 72484 30 100.0 35 .............................. ATAGCGATGATGAGAGAGTGGAGAAGAGAGAGGGT 72549 30 100.0 35 .............................. ATAGCGATGATGAGAGAGTGGAGAAGAGAGAGGGT 72614 30 100.0 35 .............................. GCCCTGTTTCACGAAACGGTTATTTTCAAGCCCTT 72679 30 100.0 37 .............................. AAAGCGATATAATCTTAAATCTCTTATTCTTATACTC 72746 30 100.0 36 .............................. TCTGTTACGGGGTCGTTTTCGATGTTCGGAGTTGTT 72812 30 96.7 35 .............................C AAATCTATATCTCTGCTAAGAATAGGCGTTTTATA 72877 30 96.7 35 .........................A.... ATTTTAAATCGCTTTTAAAGCTCACGCACATATGC 72942 29 83.3 0 ..T...........TT.......-....T. | ========== ====== ====== ====== ============================== ===================================== ================== 18 30 98.7 36 ATAACACCGACACACCTGGAGTATTGAAAT # Left flank : CGCAATAGAGTGCAGAATCTTAGCCGAAGACCCGGAAAAATTCATCCCAAGCCCCGGAAAAATCCAAAAACTATATATCCCTGGAGGAAAAGACGTAAGAGTCGATACTCATATTTACGCAGGATATATTATTCCTCAATATTACGACAGCTTGATAGCCAAAGTAATCACATGGGGAAGAGACAGAAACGAAGCTATCGAGATTATGAAAGAAGCTCTTAGAGAATTCAAAGTCAGCGGAATAAAAACGACTATTCCTTTCCACCTAAAAATGCTTGAAAACGAAGACTTCCTAAACAACAACTACGATACGAAATACTTGGAAACAAAAGGGATGGCATAATCCCTTTTTTCCAACCTCAATTATTGACAACTCTCTAAATTCTTCGATATAATCGGGTAATAAAAAGATGTTTGAGAATTTTTTGTTTTTTTGAAAAAAGATTGGAAAAACCCTAAAAAACGGGACGAAAGTATAAAACTTCCCCGAAAAATAATGC # Right flank : TTGTGGAGTAATGTGTATAGCATAATACACATTAGGGGGTGAGGAGTGGTTTTTTGGAAGTGGATTTTAAGAGGATTTTAGTATCGAAATAGTAAAAATAGTTAAAAATATAATTTTTTATTAAAAAAATAATATTTACTATTAAAAAAATATAAAAGGATTATAAAAAATTATAGAAAAATTATATTTCTTATTAAGAAAATTATAAATAAATTATAAAATAATATAAAAAAATTATATTTATTATTGGATTTTTAATATTTTTGACGGAATGTTTTATATTTTTTGTAGTTGCAACCGATTATATTTTTGAATATAATATTTTTAGCACTAACAAGGAGAAACAATGTATGAAACAAACGAAATGAGTATGAAAATTTTAGAAAAATTGGATAGTTTAGTATCAGAAAATCAAAAAATCCTCCAAAAGCTCGATGAACTTGCAGAGGAAAACAAACAACTCAAAAGCGAACTTGAAGAGGTAAAAGAACAACAACAAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAACACCGACACACCTGGAGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //