Array 1 56256-54397 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGCK01000005.1 Methanocella sp. CWC-04 CYW-04_5_length_231845, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 56255 29 100.0 32 ............................. ATGGTAAAACAGTAAAACCTTGCATTGAAGGT 56194 29 100.0 32 ............................. TGTCATGTGGCGACGGACGAGTTCTGCAAGGC 56133 29 100.0 32 ............................. ATCATCAATGAAAAAATGTTTGATGATAAGAG 56072 29 100.0 33 ............................. GACGCCCGTATCATAATCTGTGCCGAGGCTAAC 56010 29 100.0 32 ............................. TCGGTTATATCCGCGCCTATTCTAACGATGAG 55949 29 100.0 32 ............................. GTATCCGACCAGTTATCCGTGGAGAAGGAGAG 55888 29 100.0 32 ............................. TCGGTTATATCCGCGCCTATTCTAACGATGAG 55827 29 100.0 32 ............................. GTATCCGACCAGTTATCCGTGGAGAAGGAGAG 55766 29 100.0 32 ............................. TTCAACATCGAGGCGGGAACCCTGGTCCTTGC 55705 29 100.0 32 ............................. GCAACAGCCGTTAAAGTGCCTAAAATATTAAA 55644 29 100.0 32 ............................. ATCTTTTTCCATGTTCGTTACCTCGCTTTTTA 55583 29 100.0 32 ............................. TCCAATGCTCGGTTCTTGTGTTATAGCAAATA 55522 29 100.0 32 ............................. CGTTCGTCTAGTTCGTCTGGAATGTCTACGCA 55461 29 100.0 32 ............................. GGTTCTGCATTAGTTGATTTTGCGGATACATC 55400 29 100.0 32 ............................. GCCGTTGCTCGGGGCGACCTCGACAGTTTCCA 55339 29 100.0 32 ............................. TCAGACCGATGATATTAGACGCGGCTTTCGAG 55278 29 100.0 32 ............................. GTATCAACGACAAGGCTCGCTGCGGCTCTCGG 55217 29 100.0 32 ............................. GCGGATCGGGGGGTTATAGTTCCGGCCTAGAA 55156 29 100.0 32 ............................. GTCGCCGAGTGGGAGCCGAAGGACATGATCCA 55095 29 100.0 32 ............................. TATGTAAACTCTCATAAAGAAGAGGTAAAAGC 55034 29 100.0 32 ............................. GAATAATATTATAAGTCTTATCGATCCCCTGA 54973 29 100.0 32 ............................. CTGTACCCCTAAAAGCCTTTTTATCCAAAACA 54912 29 100.0 32 ............................. AGAGCCACCATTAAAGGACCAACTAGAGGCGA 54851 29 100.0 33 ............................. AACTATGGCTAAAGTTGCAGGGATCAATAAAAA 54789 29 100.0 31 ............................. AATGGACCGAAAAAAAGAACAAGAAATTGAA 54729 29 100.0 32 ............................. CGATGTCAACGAGAAGAGGGGTGTTGAGCGTA 54668 29 100.0 31 ............................. TCTGCTTATCTATAGTGTCCCCACAAACAAC 54608 29 100.0 32 ............................. TATCGACACCAGGCAAAGACGCAGTAACCTGA 54547 29 100.0 32 ............................. CTTGTGGGCGGCAGTGTTGTACACTCAATGAT 54486 29 100.0 33 ............................. ACGCTGGAACGGTACGCGGCTAACTGGAAGGAT 54424 28 89.7 0 .....................-.....AT | ========== ====== ====== ====== ============================= ================================= ================== 31 29 99.7 32 AAGGTCCCCACATGCGTGGGGGTGAACCG # Left flank : AATTAAATCTTTTATCAAGGATCGTTCCTGACATTGAAAGAGCTCTTGATGTAAAAATCCCCTCTGATTTAATATTTGATGATTTTGACTCGGAGCAGGTTGTGCCGAGCAAGGTTTGGGACCCTAAATCAGGACCGCTGCCCGGTGGCGTTAATTATTCAAATGGTAATTAGGATGATCATATGGCATCAATATCTATTTTTATACTTGAGTCTGTTAGTCAGTCTCTTCGCGGCGAGTTGACTCGCTGGATGATCGAACCTAAGTCAGGCGTTTTTGTCGGAAAGATCTCTGCGCTTGTTAGAAGCAAACTTTGGGAGAAAATTATTAAAAATACGAAAAAAGGTGGATCTATTCTGATTTACTCATATAATAACGAACAAGGATATAAAATAGAAACTTCTGGTGATACATCAAGAACGATATGTGACTTTGAAGGACTGTCTTTAGTAATTCGGCCGGAAAAACCATAATAATTGAAATCGACTAATTTTTGTAGT # Right flank : ATACAGTCGAGGTCAATAAACACATTCTTATAATCCCCATCTGTATGTTATGAATAGAAATCTTCGTATATTTTAGGAATTTTTTTTATTTCGATCAGGATTTTGATGATAAATCAGACCTTAACAATATTTCAATTGAATGTTAATAAATAACCCTGATCAGTAATCCTATTAGTTATTAAGTGCCAAAATATGCTTATATTATAATAAATAACCAAAATTCATGGCTAAATTAGCAATAAACGCCAATTATGGTTAATTTTTGTCAAAACACCGTTAAAATAACCTTATTTAACGGGTGAATTTTAAATAAATACCCTATTATTTTAAAATGGTGATAAACTTGTACGAACAAAAACTGAGAAGTATAAACACTAACCAGTTGAGAGACCGGTTAAACAGAAAGGATAAACCTCATTTATTGATAGATGTCAGGGAGGTCGAGGCTTTCGATAAGGGACATATACCCGGAGCGATCTCACTATTCGACCCTGAGATCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAGGTCCCCACATGCGTGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGTCCCCACACGCGTGGGGGTGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //