Array 1 6747-6046 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNFF01000007.1 Streptomyces indicus strain CGMCC 4.5727, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 6746 30 100.0 31 .............................. CCATCTCCACCACGCTCAGCGCCCAGCCGAG 6685 30 96.7 31 .............................A TCGCGGCGCGCTCGACGAGGTCGGTCATGCC 6624 30 100.0 31 .............................. TGGAGTCGCGCGGCGGTGACGGTGTCGTCGT 6563 30 93.3 31 ....C........................C GCGACGGCTCGCAGACGTTCTTCGTGGTCGA 6502 30 93.3 31 ....................C........C GGCCCATCGAGCAGAACGCCGCGACGATCAA 6441 30 96.7 31 ..A........................... CGCTGACGACGAAGTGGGACGGGCTGCCGCC 6380 30 93.3 31 ..........C..................C ACGTACGACCCGCGAGAAGGCGAGGAACGCA 6319 30 93.3 31 ..........C....A.............. AGTACGGCACCCAGTTCCGCAAGTTCGGCCT 6258 30 90.0 31 ..........CA.................T GCCACGAGCAGGCCGCCGCCGGCTCCGATGA 6197 30 100.0 31 .............................. TGCAGAACGTGGGCCTGCGGGACGTGACCAT 6136 30 100.0 31 .............................. AGTTTTCGAAGGAGACGCCGAGCCCGATCAG 6075 30 90.0 0 ..C.......C..................A | ========== ====== ====== ====== ============================== =============================== ================== 12 30 95.5 31 CTGCTCCCCGTGCACGCGGGGATGGACCCG # Left flank : GGCGAAGATCCAGCGCTGCTCCCCGTGCACGCGGGGATGGACCCGCCGGGGTCCTTCTGGGGCGCGGCCATCAGGTCTGCTCCCCGTGCACGCGGGGATGGACCCAACGCGCCCGCGGGGAGCGGATATAGGCCGTTCTGCTCCCCGTGCACGCGGGGATGGACCCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTC # Right flank : CCGGGTGTCGTACGCGGCGGGTCCGTACGGCGTGGGTGGCTTTCGCGGGCCGGGGGGCGCCCGGCTCGAGTTGCCGCTCAAGAGCAGTTGACCAGCGGAAATACCCGTCGCGGCGGTCCGCTCACGGACGCGGTGACGGTGCTGGATTTGCGCTGGATCGTCCTCCGTCGAGCGGCGTTTGTGCAGGTGGCAGCCCTGCGTCAGATGCCTCGGTTCACCATCTAGTCCCGGCTCACCGCCAAGCCCCGGCAACCGTCAACCTCGGGTGCCGTCAAGTCCCGGATGCCGTCCGGGATCCAGGAGCCCTAAGATCGCGTACATGCGGGCCCTGGGCTTCTTCGGTTCACGCCCGCAAATAAGCAAGCACCGCCAACACCCGCCGATGCCCCTCCGTATCCACCGGCAGGTCCAGCTTCGAGAAGATGTTGCCGATGTGCTTGTTCACCGCTGCCTCGGTGATGAACAGGTGCTTCGCCAGGTTCGCGTTGCTGCGGCCCTCC # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.54, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGTGCACGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.50,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [21.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 7476-7080 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNFF01000007.1 Streptomyces indicus strain CGMCC 4.5727, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 7475 30 100.0 31 .............................. TCGGAGACCGGGTAATCGAACCGGACAATCC 7414 30 100.0 31 .............................. GCCGCCCCTGCGAGGCGTGCTTGTACGTGGG 7353 30 96.7 31 .............................C CCACCCGGCCCGCATCCCGCATCGCACGGGC 7292 30 96.7 31 .............................G CGCCCCTGTCGACCGAGGCGAAGATCCAGCG 7231 30 96.7 31 .............................G CCGGGGTCCTTCTGGGGCGCGGCCATCAGGT 7170 30 100.0 31 .............................. ACGCGCCCGCGGGGAGCGGATATAGGCCGTT 7109 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =============================== ================== 7 30 98.6 31 CTGCTCCCCGTGCACGCGGGGATGGACCCA # Left flank : TCACCAACTGCCCGCCGGGACTGCGCGGCTACCTGACCCGCTGGCTCCTGGAAATCTCGCCTGGCGTCTTCATCGGCAGCCCTTCGGCCCGCATCCGCGACCTGCTCTGGAACGAAGTCCGCGCCTACGCCGACCAAGGCCGAGCCCTCCTCGCCCACACCACGGACACCGAACAGGGCTTCACCTTCCGCACCCACGACCACGCCTGGCAGCCCCTCGACCACGAAGGACTCACCCTGATCCACCGACCGCACAAACAACCGGCCCAAGCGGCTCCCCCAGACCTGCCACCGGGCTGGAGCAAAGCTGCTAAGCGCCGACGCTTCCGCCGATGAACGCGCGATCCTTCGAAAGCCAGCCCTCACGTGAGGAGGCCTCGTTGCCGCATGCGGGCTACGAACGACCTTTGCGGTAGTTGATGCGATACATGGAGAACGTCGGATTCTTGAGAAGTGGTTCCTCAGCGCAGAGACCCCGCGCATCATGCCTGGTCAACGAGA # Right flank : ACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTCCTGCTCCCCGTGCACGCGGGGATGGACCCGCCATCTCCACCACGCTCAGCGCCCAGCCGAGCTGCTCCCCGTGCACGCGGGGATGGACCCATCGCGGCGCGCTCGACGAGGTCGGTCATGCCCTGCTCCCCGTGCACGCGGGGATGGACCCGTGGAGTCGCGCGGCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGTGCACGCGGGGATGGACCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.50,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //