Array 1 45445-44685 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MDLR01000045.1 Brochothrix thermosphacta strain Bth-7816 Bth-7816_contig14, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     45444	    36	 100.0	    30	....................................	TGTTTCAAAGTTAGGTGTGTCAATCGTTGT	
     45378	    36	 100.0	    30	....................................	AGGAACGTCCAAAGGAATAATTATCATGAA	
     45312	    36	 100.0	    30	....................................	TGGTTTCAGAGAAACGGACATGATGACGGA	
     45246	    36	 100.0	    30	....................................	ATGGCTAAAAGCAAAAACCAAAACATCTTC	
     45180	    36	 100.0	    30	....................................	ATATGGTGCAACAGGTATGTTAGGTGTTAT	
     45114	    36	 100.0	    30	....................................	CACGCAAAAACGCAAAATAACTTCCGACAA	
     45048	    36	 100.0	    30	....................................	TGAATCAACAAAAGCGCTCTATATCCCTGA	
     44982	    36	 100.0	    30	....................................	ATATCTCAGGTGATTTATACCCAATTGAGT	
     44916	    36	 100.0	    30	....................................	TAATGTGAATGTCACGACCGCTGCTCCTGA	
     44850	    36	 100.0	    30	....................................	GATGTATCTTTATAACAATTGGTCTTCTAT	
     44784	    36	 100.0	    30	....................................	AGCGCCTCGGAATATCATATAATTCCCACG	
     44718	    34	  88.9	     0	..........................--.....G.G	|                             	
==========	======	======	======	====================================	==============================	==================
        12	    36	  99.1	    30	GTTTTAGAGCTGTGTTAAATTGAATGGTATTAAAAC	                              	       

# Left flank :   TATTACTAAAATTTATAAACAGCTAGAAAAACAGTATCATAATAATAAGGAAATCGATCTTATTGCTGATCAATTAATAGAGCTCCGTCAACTGATAGGCATTCAGTTAAATGACTATGATTTACCGCTACAACTGAATGAAGAAGTAAAACTATCTTCGCTTTATAAGCTGTTTAATGTTACTATAGAGGTTGAAACAGAGTCGATTTTGGATAGATTATTACTACTGATTGATCTTGTCGCACAATTGAAAATCGCTCGTATCATTATTTTGAATAATGTAAGGTGTTATTTTGTAGAGCAAGAGCTTCTAGAAGTATACAAGTACGCACTCTATAAAAACATAAAGCTATTACTGATTGAATCAACCTTCAAAAAAGGCAAATTGCAATATGAACGAAAATTACAAATTGATAACGATTATATCGAATTTTGGCAGTAATACCTTCATTTTTGAATCGCGCAACGAGAGCAGTAATGACAAAATTTCATTGTTTGAG
# Right flank :  ATTGACGTCCATTGATATAATGGATGTCTTTTTTTGTTATCTATAACTTTATTATGTCAACTAAATAAAGGGCATTTAAAATAACATGACAAACGTTGTTATGCAAGGTATGATAGAACTAGATTAACATTACTTAAAGGTGGTTGGAGGATGACTGGATTAAAAATTAAGCAATTTAAATTAGATAAACAGGCGATTAAGCAAATTAGTGATGACTATATTGTCGACTATCCAACTGTTTATTTGTTAAATAATGATAAAGAAGCGTATATCGGCGAAACTGTCGCGCTGAAGAATAGAATGCGTGCTCATTTAGCCAATCCGCAGCGCAGTAAACTTACAAAAGCTCATGTCATCAGCCACAATGAATTTAATCAATCCGCCACCTATAATATTGAAACGAAGCTGATTAATTACTTTTTAGCGGATCAAAAATATATCTTACAAAATAAAAGTCAAACGGTTCAAAGTATCACTCATAACTACCATAATAAAGCTTA

# Questionable array : NO	 Score: 3.21
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTAAATTGAATGGTATTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,0.78   Confidence: MEDIUM] 

# Array family : NA
//