Array 1 1-762 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUJ01000032.1 Ligilactobacillus salivarius strain FXJCJ9_2.scaf Scaffold32, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1 36 100.0 30 .................................... GCCAAGCCTTGGCAATCGAGGAAGGTGTAA 67 36 100.0 30 .................................... AGATGTCGGTGGAATATAGCCCATGAACTG 133 36 100.0 30 .................................... TGCTTTTTCATGGTTTTGGTTCGTTCACGC 199 36 100.0 30 .................................... AGCACGTTTGAACAAGTACGCTAAGCAACG 265 36 100.0 30 .................................... CCTACTTCTTTTTTATTAATCGCATTATTG 331 36 100.0 30 .................................... TTAACCATCGCTAACATTGGTCGAGCTACT 397 36 100.0 30 .................................... AAACTGTTTTATTAACGCATTAATGAAGAA 463 36 100.0 30 .................................... GAAATAAAAAAGCCCAGAGCATAAAGCCCT 529 36 100.0 30 .................................... TATCACAGAAAGTTCTCCAGCAACATTATT 595 36 100.0 30 .................................... CGATAAGATTGCAGAAATTACTAACTTGAT 661 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 727 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 100.0 31 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : | # Right flank : T # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 318-18 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUJ01000015.1 Ligilactobacillus salivarius strain FXJCJ9_2.scaf Scaffold15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 317 36 100.0 30 .................................... TAAGAAATGGGGAAGCAAACATTACTTATG 251 36 100.0 30 .................................... AGCTGTATTTGCCTCATCTGCATCGTTTAC 185 36 100.0 30 .................................... AATGACAACTCTAATTGTTGGGGAGGGTTA 119 36 100.0 30 .................................... AAATCTAATGTAAAATTGTTGCCAATGACC 53 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 100.0 30 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CCTATGTATGGATTAGAC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [18.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //