Array 1 32995-35366 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKWB01000025.1 Raoultella ornithinolytica strain AS012358 AS012358_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 32995 28 100.0 32 ............................ GCAACCAGAAGGGCGACAGAATAATGGCTATA 33055 28 100.0 32 ............................ TGTCAGGATGGATGTCACCAGAAGCCAACAAT 33115 28 100.0 32 ............................ AAGACCAATAGCCACCGCGCCGCCCCATGAGG 33175 28 100.0 32 ............................ GATTCCATAATTCACAGCAGTAAACCCATTTC 33235 28 100.0 32 ............................ AGAAGTGAAAAGCGAAATAGTTAAGTTGACCG 33295 28 100.0 33 ............................ TGGTGCAATTAAGCCAGAATGGCGATGCCGCAT 33356 28 100.0 32 ............................ AGCATCAACACATTATTATCATCCATGAGGGT 33416 28 100.0 32 ............................ ACTCAAGCCCGATGATGTTTGAGCGGCGCAGG 33476 28 100.0 32 ............................ AGAATGCCTGCGTTGTTCCGTCAGGGTATTTG 33536 28 100.0 32 ............................ AGACATAGCCAGCAATAAAGGCTCCGACCAGC 33596 28 96.4 32 .......................T.... CCGATACAAACGTTAAAGAGACGATCACTATC 33656 28 100.0 32 ............................ TCGTTGCCGAGTGGAATGCGCGTCATTTCATC 33716 28 100.0 32 ............................ ATAGAGCGCATCGTATTTCACTTCATCAACGA 33776 28 100.0 32 ............................ GTTGGCGACGACTGACAGGACCTTAGCCTTAT 33836 28 100.0 32 ............................ TTGCGGAGCCTGCTTAGAATAACCGCCCGTTG 33896 28 100.0 32 ............................ CCAGAATACTCCATCATCGTTACGGGGTCCTC 33956 28 100.0 32 ............................ AAAGGAAACGGGTAGCGTACCCGCTGGTACTA 34016 28 100.0 32 ............................ AGGCAGGCGCTGAAGCTCATATCGAACCATGC 34076 28 100.0 32 ............................ ACATACCCCGGCGACGTCGCTTAAAACCCCTT 34136 28 100.0 32 ............................ TATTACACCTCGTGCTGTCAGTCATAAAGATG 34196 28 100.0 32 ............................ GCCCCGGAATATCGTTGCGCATTTTATACAGG 34256 28 100.0 32 ............................ TCCGGGATGATACCGGCGATCCGTACCTCCAC 34316 28 100.0 32 ............................ TCCGGGCTGGAGCGTGACGGTGTGCGTTGGAT 34376 28 100.0 32 ............................ TGATAGGCCACGGACAAGGTGGAATGGGAACA 34436 28 100.0 32 ............................ TTGATGGCATTAACAGGCTCATAAGACCCCTC 34496 28 100.0 32 ............................ GTTAGCCCAGGCAGGACGGCCAGCAGCGCCCC 34556 28 100.0 32 ............................ AGCCGAGATATCGCCGATCTGGTTGAGTCGCG 34616 28 100.0 32 ............................ TATGAGCCGATGCCGGGTACTGCAGGATTTAC 34676 28 100.0 32 ............................ CATTTCAGGAAGGGTTTGCTCATGAGCGGAAC 34736 28 100.0 32 ............................ GCCAGGATGATTGAACACGGGCGCCTGATAGC 34796 28 100.0 33 ............................ ATAAACCCCGATATAAATCGAGCTGGCCAGCAG 34857 28 100.0 32 ............................ TGTAGGCAGTCGTTAATGCCATCGAACATCAA 34917 28 100.0 33 ............................ CCTTCAGGCACAACAACTGGCGAACAGAACGCT 34978 28 100.0 32 ............................ CTGACCATAATAATAGTTTTCCCTCATGGTCC 35038 28 100.0 32 ............................ ATCACCACGCGCCGATTCCTGGCGGAGCTGGA 35098 28 100.0 32 ............................ TGTAGAGCCAGCCGGAACCAGCAGCCCGATAG 35158 28 100.0 32 ............................ CTGGTTACGCCACAAAACACAGGCGCGTTGTT 35218 28 100.0 32 ............................ CGGTGACCCCGAACAACACCCTGTTCGCAACT 35278 28 100.0 32 ............................ CGTTGAGTTCCGGGAGCCGCGGTTTTGACGTT 35338 28 82.1 0 ......................GT.TTG | T [35358] ========== ====== ====== ====== ============================ ================================= ================== 40 28 99.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACGTTCGCTTTCGCCTGGCGTCAACGTGCCGCCCGCGCTCTTGCGCCGGGCAACGTTGCGCTCATTAATCCCGGTGATGCGCAGAATGTCGGTTTTCGACATTTCCGTCCACTCATGAATATTATCCAGAACGCTGACCGGTAATCCCATACTCAGCAGCTCAATCAACTGCATACCCCGATTCGCCGGTAGCCCGGCATAGCGCCACAGCGCATTATCGGCAGGTTGCTCTGCAGGAACCCAAGTTTTCATCTTCCCTCCTGAATAAGGACATTTGTCATGCTTTATTATAGTCATTTGTCGTGTTGTTGAAAATATAATCGCCGGGCAGGTCATGAGTTGATTGCGGTTTTGTGGCTGGCGGCCCAACTCCTTTTATTTGTTTGTTTTGTAATTCATTGATTTTTATTAAGTATTTTTTGGCGTTAAAAAAAGGGTGAAAGGAATAAATTTGAGGGATTTTATATATAAAACAAAGAAGTGAGTTGATATTATCTCA # Right flank : GCATTAACTTGCGTATTCTAAAATAAACCGTTCATTCACATATGGAATGCAAACTGAGAAATCGGATACGGACGAACACAGCCCTTCGCACGGACCGTCAGCGGGACGGTCCGCTATTTTCGTATTATTAGCCTTTTACTGCTGCAACACTTCAGCAAATTTCGCCAGCCATTGCGGATGGGCGGGCCAGGCAGGGGCGGTGACCAGGTTGCCGTCAACATGCGCCTGATCGATACCGATCTCAGCATAATGCCCGCCGCTGAGCCGTACTTCTGGCGCGCAGGCCGGGTAGGCGCTACAGGTGCGGCCTTTCAGTATTCCGGCGGCGGCCAGAAGCTGCGGGCCGTGGCAAACGGCGGCAATGGGTTTGCGCGCCGCGTCAAACGCCTGAACCAGTTTGAGCACCTCGTCATTCAAGCGCAGATACTCCGGCGCTCGTCCACCGGGGATCAGCAGGGCGTCATAATCCTGTTCTTTTACGGCAGCAAAGTCGGCGTTGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //