Array 1 40890-41406 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEGZ01000418.1 Escherichia albertii strain Hiroshima3582, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 40890 29 100.0 32 ............................. GAATCGAACCATCATCGCTTGCGCAATGGGAC 40951 29 100.0 32 ............................. GGATTCGAACCCCTATTAACAGTTTCGTAGAC 41012 29 100.0 32 ............................. GTTAGAGCTACTAACTTAGATAGTTTGATTGA 41073 29 100.0 32 ............................. TACCTTGCATCGTTTTCGTCATTCGTTCTCAT 41134 29 100.0 32 ............................. GTAAATATTATCGCCAAGTTTTACCATCGGCC 41195 29 100.0 32 ............................. CCAAGATGGTTTTTGAGGTTTACGGAAAATGG 41256 29 100.0 32 ............................. AATATGTTCTGCACAGGCTTTGAGGGCGAACT 41317 29 96.6 31 .............C............... GACTCGCAATCGCCGGAAGACGCGATCAGTT 41377 29 93.1 0 .............C..............A | A [41379] ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.9 32 GGGTTCCCCGCGTTAGCGGGGATAAACCG # Left flank : CTGGATGAGCTATTGGCAACGCTGACCGATGATAAACCACGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAACTGGCGTTTGTCGATGCAAACACATAAATATTTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAAACTTCCACTCATTTATATTCTTTGTCGCCTCTGAAACTCCTCCATTTTGCCTATCCGGGACTAATCATTGCCATTCTCTACAAATTATGTGGCGTTAATTCTTTGTTGGAATGAAAATTATTGCGGTAGAGTTTGGTAGATTTTAGTTTGTATAGAATCACTTTAAATATTTAACTTTTCACTCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTTTTTGTGTGATCCTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ATACAGTTGCGTTCAGGCCGGGCAGTTTCCCGCCCGGTTTTCCTCATTTAGGCATTCGACCAGCTCTGGATTGAATCCGCATTCCCTAACTCACCATGCATCACTTCATACGATTTTTTCAGAATCACATCGGTGTGTTTGGTTAGGTCTTTGAAAATGCCCTTATTCATTGCGTCGTAGCGTTTGGCATTGCTCTCAACAGGCATAAAGACATCTTTCACGCGAACCATTTTGTCGACAGCCGTTGCGTAATCTGGGTATAACCCCAGTCCTACCGTCGTATTGATCGCCGCTCCCAGGCTTGCACAGCCGTTAATGGCGTTACGTCGTGCCGGAAGGTTGAACACATCGGCAAAAATCTGCATAAACAGATCGCTGTTCGAACCGCCGCCAGTAATGATTACATGCTTCGCAAAGTGATTCATTTCATTACACATATTGTCGTAATTATTCTTCAGCGTCAGCGCCACGCTTTCCAGAATCGAACGATAAATCCAAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGTTCCCCGCGTTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 67968-69217 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEGZ01000418.1 Escherichia albertii strain Hiroshima3582, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 67968 29 100.0 32 ............................. CAAAATTCCCGATTATTATGTTCGATGAATCA 68029 29 100.0 32 ............................. CCAGTGTTGGTGGTCGAATCCCGGAGCGCGTG 68090 29 100.0 32 ............................. TCAATTCTGGAGGAGGATCAATGATAAATTAT 68151 29 100.0 32 ............................. CGCGGTTCAGCCAGTCGATGGCCCCATTGACC 68212 29 100.0 32 ............................. CCGGTGACTCTGAGTAATCAGGGGAAGTTCTC 68273 29 100.0 32 ............................. CCGATATATTCAGCGTTCCTGAAACCGCTTTT 68334 29 100.0 32 ............................. CCCTTCTGACCAAAAACCTGCTCCTGTGCTGC 68395 29 100.0 32 ............................. TGACTTTAGCCAGCATTACAATGCTGGTGGTT 68456 29 100.0 32 ............................. TAAATCTGCGTGTTTTTTGCGGGTATCCAGGA 68517 29 100.0 32 ............................. ACTGTATTCCCGGTCACTACCGGCGATGTCAC 68578 29 100.0 32 ............................. CCCAAACCAGGATAAAAAGGAGTCCACAGAGG 68639 29 100.0 32 ............................. CCGTTGCTGGTCCATTATGGGCAGCAGGGAAG 68700 29 100.0 32 ............................. TGACGCATGCTGCGCCCAAGACGGTCTAACTT 68761 29 96.6 32 ............................A GAAGATTATTCGGCAGTCTTTTGGTAATGCCC 68822 29 100.0 32 ............................. TCCGCAATCCTGATCTGACTGGTGTGGCCTGC 68883 29 100.0 32 ............................. CGGTTGCAGCAGTCAACACAGCTTCAACATAA 68944 29 100.0 32 ............................. GCTAAAAACCAATACAGGCTTATCGCTACGGA 69005 29 100.0 32 ............................. ATAAAACGCTACGGGATTTCCTTGTGGCGGGT 69066 29 100.0 32 ............................. GGAGCGCCTAGCATAATACCTCCTCAAATTCG 69127 29 100.0 32 ............................. CTCCGCTACCGCCTCGGTGAACAGGTACACAT 69188 29 86.2 0 ........................TCTG. | A [69209] ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCCGCGCCGGATATGTTACCCCCTGCAATTCCTGAACCTGAAACATTAGGCGATAGCGGTCACCGGGGGCGCGGTGGATGAGTATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTTCGCGCAGGTGTATATGTCGGAGATACGTCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCACTCAACTGGCCGGTTGTGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACTTGGGGCGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAATGTTTGAATTTTGTTGGTAGATTGTTGATGTGGAATAAACTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GCTTCTATTTTCAAACTCATCAGGACGCCTTCGCCAGTTCCTTCACCAGTGGCAGCATTATCCGCATAATGTCACGGCAGCGACGTTCTATTCTTCCTGGAAGCGCCTTATCAATATGTTGTTGATTATCCAGCCTTACATCATGCCAGCTATTTCCCTTCGGGAACGCTGCTGTTTTTGCGCGTTGTTGATAGCCGTCTTTATTTCCAAGACTCCAGTTTGTCGCTTCAACGGAAAGTACAGCAATACCTGCTTTGTCGAAAACTTCTGCATCATTACAACATCCCGTGCCTTTCGGATAATTTTTATTCAGACCTGGATTTGTGGCGGCGGCAATTCCATGGCTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCCGGGGTGTTTACGCCGCTATTGAAATACAGTTTATCGCCTACAATCAGGTTATCGAGATTAATAACCAGTAGAGTATTTTTCTTTTCGGCTTCACTCATTCGCTTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //