Array 1 277056-273079 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGLY010000008.1 Streptomyces sp. SID13726 NODE_8_length_394291_cov_73.8712_ID_15/0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 277055 37 100.0 35 ..................................... CCCCTGGTTCGGTTTCGGGAAGGCGGGCCATGATG 276983 37 100.0 37 ..................................... CTCGTACTTCTCCTGCGCGTCGACGGCCTCGCTGATC 276909 37 100.0 35 ..................................... TTCAGATCGAGGCGTGCGGATTCGTCGATGCGGTG 276837 37 100.0 36 ..................................... ATCGACGGACGCGACGGCCTCTCCGCCCTCACCGAC 276764 37 97.3 35 .........................A........... CCTCCCCTCGTACGGGCGATTCGCGAGGAATCTCC 276692 37 100.0 36 ..................................... ACCACGGCCACGTCGTCCAGGTATTCGCTGCCGCCG 276619 37 100.0 35 ..................................... AACTCCAGTACGTGCTGCGTCGCCTCTACTGCCGC 276547 37 100.0 36 ..................................... GCCGCCGTCGCCCCGAACGGCACGCGCAACATCGAA 276474 37 100.0 37 ..................................... GCCCGGGGCGGCGTGTACGACGTGCTGCCCGGCTACA 276400 37 100.0 36 ..................................... CGGTACTCGCACGTCGAATACCGGGCCAACCCGGGA 276327 37 100.0 37 ..................................... TGCCCGTCGATGATGTCCAGTCCCGTCGGCTTCCCGC 276253 37 100.0 35 ..................................... TCCCTCTCGGCCTACGCCGGTATCGCCGCGGTCGT 276181 37 100.0 37 ..................................... CGCGCATCTGCTGGTCGCTGGCCCCCGAGTCGCGGGC 276107 37 100.0 36 ..................................... CCAGCGGGCGGGCAGCACGCTCGGCGCGACGTCCAC 276034 37 100.0 37 ..................................... ACCGAGGCCGGGCTCTCGCACGACCAGCCCACCGGGA 275960 37 100.0 35 ..................................... TTCAACCCGGGAACGCTCGTGGGCGAGGGGTGGCT 275888 37 100.0 35 ..................................... TTCGTGATCGCGAGGGTGTGCGCGCCCGAGCCGCC 275816 37 100.0 36 ..................................... GCCGCGACCGACCTCGTCCCTTACGTCCGGGCCGTC 275743 37 100.0 36 ..................................... GGCGGGGCCGCCGCCGCCAGCACGGCGGGCGAGGCC 275670 37 100.0 37 ..................................... ATCTCGTACTGCTCCGTGTCCATCCGCGCCCTCCGTT 275596 37 100.0 36 ..................................... TGCGGGTCGGCTGGGGGGGCGGTGGTGTCGGCGGTG 275523 37 100.0 36 ..................................... GTCGGGTCCTGGCGGTTAACGAGCACCGACGGCGTG 275450 37 100.0 34 ..................................... TGGTAGCGGCTCTCGCTCTTGGTCGCGCCCCGCA 275379 37 100.0 36 ..................................... GCGGGAGTGCTGGCGCAGGTAGCGCCGGAGGCCACC 275306 37 100.0 35 ..................................... GTTCTTGCGTCGTCTGGGAATGCCCTGCCGCCGGG 275234 37 100.0 37 ..................................... ACCTGCCGCTACGGCTGCACCGCCGAGGCCGTGGGCG 275160 37 100.0 34 ..................................... CTCGATCAGGACTTCCTCGTCTACGCCAAGGTCC 275089 37 100.0 36 ..................................... TCGGGATCGACCGGGAGCTCCCCGAGCCCTGCCGCG 275016 37 100.0 36 ..................................... GGAGAGGAGGCGGCCATGGCGCGATCCGGTGTGCGG 274943 37 100.0 36 ..................................... CAGGTCGTCACCTCGTCTACGCGCCCGTCCTCCCCC 274870 37 100.0 35 ..................................... AACAAGCCCGGAACCACCTGACCGTGTCCGGCATA 274798 37 97.3 36 ...............T..................... TGCAACGCCCGGGCGGACTGGGTGAGCGGGCCGAAC 274725 37 100.0 35 ..................................... GACGCGGTCGCACGCCCGGTGATCGATCCGGACTA 274653 37 100.0 18 ..................................... TACAGCGACGCCGCCGAC G [274626] Deletion [274599] 274597 37 91.9 40 AA...C............................... CTCGGCCCCGGCGGCGCGGGCGCGGGCCAGCCGCTGCACC C [274591] 274519 37 100.0 37 ..................................... CCTGTGGGTGCGAGCTGAATGGTGACGTCGACACGGC 274445 37 100.0 35 ..................................... ACCAAGAGGCCACGGAGTCCTTCGGCGCGTACGTC 274373 37 100.0 36 ..................................... GGCACGGACGAGGCGACGCCGCTGCGGATCCGGCAG 274300 37 100.0 38 ..................................... GTCAAGATCTGCGAGGCGGCCGGTCTGCCGCCCATCAA 274225 37 100.0 34 ..................................... TTCCACGCCCTGCGCCACCAGCAGGTCGCCGCGA 274154 37 100.0 36 ..................................... GGCGGTCGCGAGGGCGTAGTGCGAGGCAGCCAGCGC 274081 37 100.0 37 ..................................... AGCGTGCCGCCGTGCTCGGGGCACACGCCCCACGGCA 274007 37 97.3 37 ...............T..................... TTGACGATGGCGACGGCAAAGCTGACCGAGGTGACGC 273933 37 97.3 36 ..........G.......................... CATGGCTCCTGCCGGGAGACGGCCAAAGCCCTGCTC 273860 37 97.3 36 ..............................A...... GACGAGTGGACCCACCGCTACGACAGCAGCCACACG 273787 37 94.6 38 ...........T.......T................. CTCATAAAGCCGGGACCGCTGCGCGTCCTGCGCCTGGC 273712 36 81.1 0 ......-.................G.T.CC.....CG - Deletion [273677] 273676 34 83.8 35 -.......T....--.....C...........A.... GGGGTGTGCGTGCACAGCGAGTCCGGCAGCCGGGT 273607 35 86.5 36 ...........T........--..TA........... AACTTCGACACCGGCCGTGCGCAGCACGGCTTCACC 273536 36 89.2 18 ........T..........C-...T............ GAATACCTGCTGTACCAG Deletion [273483] 273482 36 89.2 36 .C.A......T..-....................... GGCGTGCTCCCAGTCCAGTACCGTGACCAGCAGACG T [273480] 273409 37 89.2 36 .C............T.C...C................ GTCAAGGTCCTCCGTGGTGGACTGCGGGCCTTGCCG 273336 37 91.9 36 ...........T....A...C................ AAGGCCCTCGGCCAGGGCATGCTCGATGGCATGACG 273263 37 83.8 36 ..A.......T.....T...C.........G....G. AACATGTACGCCGGGAAGCTGGGTGGCTGAGGCACC 273190 37 73.0 38 ...AT...TC..T...C.A.CAG.............. GAGATAATGATGCGGTCCACCCCGCCGTACGTAGGGGG 273115 37 73.0 0 .....AAG..T.T...CT..C.G...........G.. | ========== ====== ====== ====== ===================================== ======================================== ================== 56 37 96.7 35 GTGGCGGTCGCCCTCCGGGGTGACCGAGGATCGCAAC # Left flank : CAAGGCGCCGATCTCCGCCTGGAACACGACACCCTCCGCGTTCAACTCCCCGACACCCCGGGGCGACGGGTCCTGCCTCTGCGCCGCCTCGACGGCATCGTCGTCTACGGGCACATCAACCTCTCCACCGAACTCATCACCCGCTGTGCCCAGGACAACCGTCCCATCACCTGGATGACCAGAGGCGGCCGTTACATGGCCCGCCTCGACGGAGCCGTCCAGGGAAACGTCCTGCTGCGGCACGCCCAGCACCGACTCCACGACGACGCGGGACCGCTTGCCCCAGGGTGGCTTCGACAGCGTGCAGACTCTTGGCATCGCCCAAGTACAGCCACACCGCGAAGACCTCGTCTTGTGATCGTTCGCTGCTGCTTCGGAACCTCAAGTGCACACGCGACACGCGGACCACACCGAAGCAGAACGCCCGTTTGTGCCCTACTTTTCTCCCCCCGGTGGCTTTCAAAAACCACAAGCTACTGTGAACTAGCTGGCCAGCCAGC # Right flank : CGTGTCGAGCGCGGGACCGGGGCGGGGGCTGACAGGTCAGTGCGGTCGGCCGGCCTGGCGTTGCGAGCGTGGTGGCGTGGTGGTGGCGCGCACCGGAGTGTAGACGGAGGCGCGGATGGCCCAGGTGCGCTGGTTGATGCTGGGGCCGGCCAGATGGTCCAGGTGTCGAGGGGCTGGTGGGGTGCGTTGGCGGCTAAGGCGTCGAACTGTATGCCGGCGTCGCCCGTCTGGGGCTGCCAGTGCAGTCGGCTGCCCTCGACGGTGGGTGTCCATCCTGCTTCGGTGAGGGGTCGGGTGGCCTGGGCGACGGTCTTGTCGGTGACCGCGGTTCCGAGTGCGGTCTCCCATGCTTGAGCGTCGCTGAGGGCGGTGAGCAGGGTGTGCAGGATGGGTTGGGGGGTGGTGGGTGTGATGGCCATGTGCCACATGCGCTCGCTGACCAGGCTCTCGTAGGCGGCGATGGTCCACTGCGCGTCGCGGGGGCCGGCTCCGTGTTCGAA # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGTGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.40,-17.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [64-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //