Array 1 37043-33990 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGMO010000068.1 Micromonospora sp. S-DT3-3-22 NODE_68_length_38741_cov_25.3388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 37042 37 97.3 37 G.................................... TCGGTGCGGGTGTTGTGCTCGCGGATGGCCTGCTCGA 36968 37 100.0 38 ..................................... AACACCGGTGCCGCCCGGGCTGCGGTCGATTCCTTCCA 36893 37 100.0 35 ..................................... ACCCTCGACGGCGGCGAGGCCGTACTGAACCCCGT 36821 37 100.0 36 ..................................... TTCAGCGCGATCGGCGGCCTCAACGGCGGGGGTCAG 36748 37 100.0 36 ..................................... GATCCGGAGGTCGCCGGCATCCCCCGGGTCGGTAAG 36675 37 100.0 36 ..................................... CCTCCGGCTCTGCCGGTTGGCCATCGATGGTGTGGG 36602 37 100.0 37 ..................................... GGCCTGATCAACCCGGGCTCGACGCGCACCACCACGA 36528 37 100.0 38 ..................................... CTGGGCACCCCAGGACGGCTCGTCGTCGAACCAGTCGT 36453 37 100.0 36 ..................................... CTGGTGGTCGGCGGGCTGCTGTCCACGTACGGCGCG 36380 37 100.0 35 ..................................... ACGCGCCGACTCGACCGGGTCGACCGCGCTACCGG 36308 37 100.0 38 ..................................... AACGACTCGGGCTCGGAGATCGACCGACCGCTGTCGAT 36233 37 100.0 36 ..................................... CCAGCCCGGCCGGTGCAGCCGGTGCGACGCGGTGAA 36160 37 100.0 37 ..................................... GCGGAGCCGGAGACGGGTGGGGAGGCGTACATTCCCC 36086 37 100.0 37 ..................................... GTCAGCAGCACCAGGCAGGCCACCAGGAAGTCGCTCA 36012 37 100.0 36 ..................................... GCTAACCTGCCCCTGCTCAACCGGGCATCCCGAACC 35939 37 100.0 37 ..................................... ACCGACTTCGGGCCGGACCCGGCGGCGTACGCGGCGA 35865 37 100.0 35 ..................................... GTTGACGCCGAACGGGCGGTCGCCGACTGGGTCAA 35793 37 97.3 37 ..........................C.......... AAGCACGTCACCCCCGGCAGCCCTCTCCGCCAGCGGA 35719 37 100.0 38 ..................................... CCGTACGGGCGCGGGTTCCGCGACGCCGAGGAGTCCGA 35644 37 100.0 36 ..................................... CAGACGGGGGACGACATCACCGGGTACACCCGGGTC 35571 37 100.0 35 ..................................... GACTCGTCGTAGGTGGCCTTGTCGACCCGGCGGGT 35499 37 100.0 37 ..................................... GGGAGATACCGAGCCCATCGCAGAACTGGTGGACCTG 35425 37 100.0 37 ..................................... GCCCTGCCGGGGACCGAGCAGCAGGCCGAGTAGCCAG 35351 37 100.0 35 ..................................... CCTGACGTGTTCGACCGGATGGCCCAGCTGGAGTC 35279 37 100.0 38 ..................................... CACCTCACCGTCGGTCAGTTCCGCCGGAGCCAGGGCCT 35204 37 100.0 35 ..................................... CGGCAGCAGCAGCCCGGCGGGAAACCGGACCGGGC 35132 37 100.0 38 ..................................... CGCGCGCGTGCGGTCGTGAGTTGCGGTCTCAGGTCGTG 35057 37 100.0 37 ..................................... CGCCCGGCGGGCGGCCTCATCGGCGGCCTGACGCTGA 34983 37 100.0 36 ..................................... ACGGACGGCAACGTCAGTCATGGTCATCCCTCAGAT 34910 37 97.3 35 ...............................T..... GGCAACGACTGGGCTACCGCCGACGTCACCGGCTG 34838 37 97.3 36 G.................................... CCGAGCGAGTAACCCACCGGTGCCGCCTACCGGAAG 34765 37 97.3 37 T.................................... CACGCTGCGGCGTTGCGGACCAGGTCCGTCGCCAGAC 34691 37 100.0 37 ..................................... CCGGCGGAGGTTGATGTCGACTTCACCGGCGCGTTCG 34617 37 97.3 35 G.................................... GGCAACGACTGGGCTACCGCCGACGTCACCGGCTG 34545 37 97.3 36 G.................................... CCCTACCCGGGTGAGTCCACCAACGCCATCGCCTAC 34472 37 97.3 37 A.................................... CCGCAGGGCATCACGATCGGGAACCTGGCCCGCGTCG 34398 37 97.3 35 T.................................... CGGTTGGCGGCAATGCCCACCGGCAGCGACCTCAC 34326 37 100.0 35 ..................................... GCCGACAAGCTGAAGCTCATGCAGGCGGCCGGCAT 34254 37 100.0 39 ..................................... CTTGATGGTGCTCACGTCCTGGCCCTTCATCCTGGCCTG 34178 37 97.3 39 A.................................... GCGGACCGACAAATACCCGCCGTGAGTGACAAAAGCGTC 34102 37 89.2 39 G.......T...............T.......T.... ACCAAGGACGGCGCGGCGGCCGGGTACAACGTCCTGGTC 34026 37 86.5 0 G......................A..........TTG | ========== ====== ====== ====== ===================================== ======================================= ================== 42 37 98.8 37 CCTGCGCCCGGCCACCGCGCCGGGCGAGGATCGCAAC # Left flank : GCGGCTCCTGGAGATCCGCGATCCGCGAGACCGCAGCTTGGGCGTCAAGACGCTCAACCTCGGCATCGAGGAGGACCCGTTGGCTCCAGGGCGGTTCTTCGTGGCCAGTGAGCGGGCGGCCGTGGTTCCCATCCCGTCGCTGACCTCCCATGAGGCGTTCGACTCCGAGGTGCTGTTCGGCGCCGGGCCGGCCTCACGCCTGCTCGACCACGGCCGGCAGGCGTACGCTGCCGCTCGACGCATCGAAACGGTGGTCGGCGTGCAGGCGTTGGATGTGCTGCGAGAGCGGCGGGGGGATGATTCTCTTGTGCTGAATATCCGGTTGACCGTTTGAGGTTCGTCCCATCAACCTGTGCGAAGCTTTAATGATCTAGGAACCTCCAGTGGACGCCGGAACCCCGGAAGGTTCCGAGGGAGAATATCTGTATTAGATGAACAAAACGGACCCCGATTGGGTCGATGACGCATCGTCGGATTGCTATATTCGCTGTTGATGAGCT # Right flank : GTTGGGTAGCCGCACCAGCTGGACTTATTCGGGCGGTCCGGAGTCCTATGACGGTCCGGCTTTCGGGCGACGGCCGCCCGGATAGGGTGTCCCTGGCGGGCCCTTGATCGTCCCGGCACGGGTCAAACGGCCTCCCGTTTACCCGTTACCTTTTTGGGCGGCGTTGACAGCTGCCTCATCCCCGACGAGCGGCGGATCTATGGAGAGCTGGGTTGGAGCTGGACTGCGTACGCCCGGTAGGGGATCGACGCGGAAACGGCGGCGTCACGCCAGAGGTTGGCCTGCACGATCTTCTCCGGCTCGCTGATCAACTCGCCGGAGACGAACCGGCCCTCCTCGTCGTAGTACATCGCCACGAGCTGAGAGGAGTCGAATAGCCAATAGTCGTAGCGAGGTAATGCAGCCGGCCAGTCATCACCGGAAACCACGATGAGGCGAACGTCCTCGCCCGCCTCGACCGTGTGCTCGTAGGCCCAGCCGCATTCGAACCGGACGTAGTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTGCGCCCGGCCACCGCGCCGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCTGCGCCCGGCCACCGCGCCGGGCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-17.20,-16.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //