Array 1 120524-117096 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXZE010000011.1 Myroides odoratimimus strain MO291 NODE_11_length_125606_cov_100.491759, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================================================================================================================================================================================== ================== 120523 37 100.0 30 ..................................... ATCGGCTTGTTGTTCTGTTATACGCTTAAC 120456 37 100.0 30 ..................................... ATGCCCCTAACATAGTGTGTTTATACTTTT 120389 37 100.0 30 ..................................... AGACAACTTAAGAAGTGAACGTGAACAATT 120322 37 100.0 30 ..................................... CCTAATGCTCTTAAAAATTTATTCATATCT 120255 37 100.0 30 ..................................... GAAGGAAGAATTAAGTTTGTAGGGCAAACG 120188 37 100.0 30 ..................................... ACACCTGCAAAACAACTATCTAAATTCCTT 120121 37 100.0 30 ..................................... CATCTAGCCTTTAGCACTAACATTAACACC 120054 37 100.0 30 ..................................... AGGGGAAGGCAAGTATGAATATGCTTATGA 119987 37 100.0 30 ..................................... ATATAGGAAAGAATAAACAACCTATTGAAG 119920 37 100.0 30 ..................................... AGATTCTTTTTTGTATTTCTCATTTTGTAG 119853 37 100.0 30 ..................................... TGTAGACTTACAGTTTTCTGCACAAGGGAT 119786 37 100.0 30 ..................................... TAAACACCTCTCCTTGTTCAGTAGCTTTAA 119719 37 100.0 30 ..................................... ATTTATGAACACCTCCTTTTTCGCAATGTT 119652 37 100.0 30 ..................................... AACAGGTGTTACTAAAGCAATTACAATAGC 119585 37 100.0 30 ..................................... TATTGAGGTACTTAAAACACAAAATACTAA 119518 37 100.0 30 ..................................... CATTAGTTTCTCCTTCTTCAACTTTTCCAA 119451 37 100.0 30 ..................................... CCTTAACTACTGTATTATACGTTTCGAAAG 119384 37 100.0 30 ..................................... ACTACACACGTCTAAGTAAATACGTTTTAC 119317 37 100.0 30 ..................................... GTATTTGTGCTGTTCCTTTTAATTTATCCC 119250 37 100.0 29 ..................................... TAAGTTGGTTAGGCCAGTAGTCTTTTGCA 119184 37 100.0 30 ..................................... AGCCGAGTTATTAAGGTCCGTTAAACTTAG 119117 37 100.0 30 ..................................... AAATGTTGTTCGTTTAATGCAATTGGCATA 119050 37 100.0 30 ..................................... TATTGCTTCTATATTAAGTGGAGCTATGAT 118983 37 100.0 30 ..................................... TTCATCTGTTATATCATGTGCATTTGCTTT 118916 37 100.0 30 ..................................... CTACGTTATCAGCGTCAGTTACGTTTGCTT 118849 37 100.0 30 ..................................... TCATAATAATGCGCTTAGGAATATAGAATA 118782 37 100.0 30 ..................................... TTGTATCTAACTTACCATTAATACTATCAA 118715 37 100.0 30 ..................................... CATAAGTAACCGCTTTACCCGACTGAACAC 118648 37 100.0 30 ..................................... CTACGTTATCAGCGTCAGTTACGTTTGCTT 118581 37 100.0 30 ..................................... ATAGTATTAATATTACCAATATAAAGCAGA 118514 37 100.0 30 ..................................... TCCATAAGTCTCATTAAAAAAATTATCCTT 118447 37 100.0 30 ..................................... ATATGCAAAACACATCAACACTTAAATAAA 118380 37 100.0 30 ..................................... GACTTATCTTGTTTACTCGAATGTGATAAG 118313 37 100.0 30 ..................................... TATTCCAGCTTATTGGCTTGTGGGGAGAGA 118246 37 100.0 30 ..................................... CGTTCTCTAGATCCTTATCAATGTATAAAC 118179 37 100.0 30 ..................................... TTTCGCACATATCTTTACTCAATAACATTT 118112 37 100.0 31 ..................................... GTTGCGCTCCCAAGGGTGGCGGTCGCACCAA 118044 37 100.0 31 ..................................... GTTGCGCTCCCAAGGGTGGCGGTCGCACCAA 117976 37 100.0 30 ..................................... TAGCAAAATGTCTTGGAACAATAAAGTAAA 117909 37 100.0 30 ..................................... TAGCAAAATGTCTTGGAACAATAAAGTAAA 117842 37 48.6 72 ................G..NNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAA 117733 37 100.0 30 ..................................... CATTCTGTTCTTGCTCGATGTCTAGGTTTA 117666 37 100.0 30 ..................................... CATTCTGTTCTTGCTCGATGTCTAGGTTTA 117599 37 100.0 80 ..................................... CATTACCAATATGAAGTAACCATAATTCTAGTTGGTACTGTACACAGTTTACTTACGTTGTTTCTATTTTAAATATAGGA 117482 36 73.0 81 ...C..GA.-..TGAA.AA.................. GTATTGATTTACCGCCTGTAAACTTTCCCGGTTGGTACTGTACACGTTTTTACTTACGTTGTTCTTATTTTAAATATAGGA 117365 35 81.1 198 ...C...A.C..A.-.A...-................ TATTTCTAAATACACGCAAACCGCTTTTGTGTTGGTACTGTACACGTATTTACTTACGTTGTTTCTATTTTAGATATAGGAGTTCGTGATTATAAATAATTGGCGTGCAATCACAACTAACAAAATAATCTCCAATAGAGTCAATAAGTTGGTACTGTACACTTATTTACTTACGTTATTTCTATTTTAAATATAGGA G [117361] 117131 35 81.1 0 ...C...A.C..A.-.A...-................ | G [117127] ========== ====== ====== ====== ===================================== ====================================================================================================================================================================================================== ================== 47 37 97.5 37 GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC # Left flank : AAAGAGGTACAAGAAATAGAGTGTATCGTCTATAATCAAGTACCGAATAAGGAGTCTTTAAAACAATCAGGTAATGAGAACTTTAAACAATATGTACTTCAGGGGTTACTGCCTCGAGGTACGGATGTAAGAGAGATGCTTATATTATCAACTGACGTCAAGTTTAAAAAAGAGGAGATTATGCAGTTAGGACAAGCTGGGGAAGTAGAACAAGATTTGTATAGTCTAATCTATATCCGCAATAAGTTTGCGCATAATCAACTGCCGATTAAGGAGTTCTTTGATTTCTGTGAAAATAATTATAGACCGATTAGTGATAATGAATACTATGCTGAGTATTATATGGAGATATTCAGATCTATTAAAGAGAAATATGCAAGCTAGGATAAGAATAATGGTGTTTATGGAAGTAAGATAAGAAGATATAAGCCTTTTTTTAGAAGTATAAAAGGCATTGCACCCTAGTAAATATAGTACATCTGACCTCTGCAAAGGTAGAG # Right flank : TCGAATCTATCGTCTTGCTCTAAATCTACTGTTGGTACTGTACACGTTTTTACTTACGTTGTTCTTATTTTAAATATAGGAGTTCGTGATTATAAATAATTGGTGTGCAATCACAACAATTTCTTTATTACTATATAACACGTTTAAGTTGGTACTGTACATGTTTTTACTTACGTTGTTTCTATTTTAAATATAGGAGTTCGTGATTATAAATAATTGGTGTGCAATCACAACTATAATATCAAGCACCTCTTTTTGACTAATGTTGGTACTGTACATGTTTTTACTTACGTTGTTCTTATTTTTAAATATAGGAGTTCGTGATTATAAATAATTGGTGTGCAATCACAACTTAGCAAATGTATTTTTATCAGTAAAACTGTTGGTACTGTACATGTTTTTACTTACGTTGTTTCTATTTTAAATATGGGAGTTCGTGATTATAAATAATTGGTGTGCAATCACAACTTGTAAGTCGTATTTGATCTCAAGCCGTTCGT # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.52, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGTACTGTACACGTTTTTGGTGTGCAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.10,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [31-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 100903-100706 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXZE010000006.1 Myroides odoratimimus strain MO291 NODE_6_length_160962_cov_150.518147, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================== ================== 100902 35 97.1 46 ..........................T........ AATTCCAGATCATTTAGATGAGTGTCCAGACTTACCAGGTTTACCA 100821 35 94.3 46 ..A.............................T.. TATTCCTGATAATAAAGACGAATGTCCAGAGATCCCAGGTTTAGCT 100740 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================== ================== 3 35 97.1 46 GAGTTCAACGGATGTCCTGATACAGACGGAGACGG # Left flank : GGAATATCTTACCATCAGTATCTTACTTAAATGTAGCTAGATACTTAGGTGATGGATTCTCTTTAGGATTAGTTGGGTCTGTTAATAAAATTGACAAATTCATCAAATCAGAAGCAGAAGGATATGAAAAGTACAACCCTGGAGATTTAACTTACTACGGAATTGACGCAGAAGTTAAATATAGCTTCAAAGAGATTTTGAAATCGAAAGTAGTTGATCCATTCATCTTAGTAGGTGGAGGTTATACTTTTATGGGAGATGCAAGTCAAGGAACTGTTAATGGAGGAGCTGGATTAAACTTCTGGTTTACTAAAAACGTTGCTTTAACTGTGCAATCTACTTATAAACATTCATTCTCTGATTCTAGAACACCAGACGTAGGAGTTGCTTCACATATGCAACACTTTGCAGGTATTCGTTTCCAATTTGGAGGAAAAGATACTGACGGAGATGGAGTTTTAGACAAATATGACGAATGTCCAGAGATCCCAGGTTTAGCT # Right flank : AGTGCCAGATAATAAAGATGAGTGTCCAGAAGTACCTGGTCCAAAAGAAAACAATGGTTGTCCTTGGCCAGATAGAGACGGAGACGGAGTGCCTGATCATTTAGATAAATGTCCAGACGTACCTGGTCCAGCTTCTAACAACGGATGTCCTGAAGTTAAAGAAATTGAGCCTGAGAAAGTAAAACAGCTTAATGACTACGGAAAAACATTATTATTCCACACTGGAAAATATACTTTCCAAGATGGTTCTTACGCAGTGTTAGATAATATGGTTAAAATCATGAAAGAATACCCAACTGCTAATTTCCACATCGCTGGATATACTGACAGTACAGGGTCTGACAGAATTAACTTACCATTATCTGATAACAGAGCTAACGCTGTAAAAGTTTACTTAATTGAAAAAGGAATCGATTCTGCTAGATTAACTTCTAAAGGATACGGATCTAAAGATCCAATCGCTTCTAACAAAACAGTTAAAGGACGTGAGTTAAACAGAC # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCAACGGATGTCCTGATACAGACGGAGACGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 1 79432-67769 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXZE010000010.1 Myroides odoratimimus strain MO291 NODE_10_length_135379_cov_91.603406, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 79431 30 100.0 37 .............................. TTAGTAATATCATAAGAACCTTGGTTGTTTTTAAATA 79364 30 100.0 37 .............................. GGATATCGATGTGACTATAAAAGCTAATGTTGATATG 79297 30 100.0 37 .............................. CCTAATAATCCTGATTTAATCTTAGATGGTGTTAAGG 79230 30 100.0 37 .............................. TTACCTATTCTTGTTAATGATGGGTCTGCTGTAGTGA 79163 30 100.0 37 .............................. TATATTAAATGTGATTCGCTAAACTCCCCTAATTCAT 79096 30 100.0 36 .............................. TTAGTTATTTTAAGTATGTTTGAGTATAAGTCTTTA 79030 30 100.0 37 .............................. AATATCTTGATTGCTCTATCTTCCATTTTGCTATATC 78963 30 100.0 37 .............................. GTTGTTCTTGATTGGTCATATCCTTGCTTCCATCTGA 78896 30 100.0 36 .............................. GCGATTGACGCTATTAAGGCTAGGAAAGGGTTAGTT 78830 30 100.0 36 .............................. GGAATTGACAATATCGAAGCTAATTGTGTTGTTTGT 78764 30 100.0 37 .............................. CATAAGAAGCTAGATAAGGGTGTTCTGTTTTATAATC 78697 30 100.0 37 .............................. AATACTGCTAAAGTACGTCCCATTGTACTACCTACTA 78630 30 100.0 37 .............................. GTATCTTGTGATACTAATTTTAATAACGTATATATTA 78563 30 100.0 36 .............................. ATGATTATTCGAAGGCCTTCTTTTCTACCCCCGAAG 78497 30 100.0 36 .............................. ATGGATCTTTATCATGGAATAAGAAAAAGTAAGGAG 78431 30 96.7 36 .............T................ TTGTTATAAAGAAATATTATGCAAATAGACTTAAGA 78365 30 100.0 36 .............................. TTGTGCTTGTGTTACGTTCTAAGGTTGCTTCGTATG 78299 30 100.0 35 .............................. TGAATTCAGAAAGACCGATTTTGTCTTCGCAATCT 78234 30 100.0 36 .............................. GTATGAAAGTTATCGGAATCATCCAATTTATTACAC 78168 30 100.0 36 .............................. GTAACCTATGTTCGTGAAGTCTTAGAGTTACCATGT 78102 30 100.0 37 .............................. TTGGTAAGGCTACTGCAAAACCTTTTACAGATTGGAA 78035 30 100.0 36 .............................. AGGCTTCAGACTTCGAAGAAGTAACAGAACTAATAA 77969 30 100.0 34 .............................. GAACAAACAAGCTTGAAGGCCATTGCTGTAAGTG 77905 30 100.0 35 .............................. AGTTCGTTAAGACCGTATATAAACGGGGTTCAAGT 77840 30 100.0 36 .............................. ATAAACAATTGACAAACATTTTTTGTTTTTATAAGT 77774 30 100.0 35 .............................. ATGATCGTTTTGCAGATGCAAAAACGGTGCAGGAT 77709 30 100.0 34 .............................. CTTGTTAAGATGTTTAATTTAGTAATTATACCAG 77645 30 100.0 34 .............................. AGAGATATAAATGCAGTTAATCTCTATGATTCTA 77581 30 100.0 36 .............................. GTGTTTAGTAGTTGGATAGTTAAAAGAGGAATTGCA 77515 30 100.0 36 .............................. AGCTCTAAAAGAGGGAGAGATTGAAGGTAACGCAGG 77449 30 100.0 36 .............................. TTTTCAAACATTAACAGATGAGAATAAAATGTTATT 77383 30 100.0 36 .............................. TCTGTAGACGTACCATACGCATTATTAATAACACCT 77317 30 100.0 37 .............................. AGGCCTTATGTGCAATTGCAAGCTAAATGGCGTGAAG 77250 30 100.0 35 .............................. TCAAAACGTATCTGATTCCCGCTAAACAATAAGTT 77185 30 100.0 39 .............................. TCAAGAAAAGCAACACCGCAGGAAGTCGAACAAGTGCGA 77116 30 100.0 36 .............................. CTATGAAAATAAAAACTACTTAATACGAACAATAGT 77050 30 100.0 36 .............................. ATAAACAATTGACAAACATTTTTTGTTTTTATAAGT 76984 30 100.0 36 .............................. GATATTGATGATCTTATACTTGAAAGCAATCAACTA 76918 30 100.0 36 .............................. AAGAAAGTTTGCAACACACTTGTTTTACCATTTCCA 76852 30 100.0 37 .............................. TTTTCATGGAGGTTGCGTTGAAGGAGTTATTAATAAT 76785 30 100.0 37 .............................. AAAAGAAGTAGCCGAAAGTAAAATACAAATTATAGAT 76718 30 100.0 35 .............................. TGGGTGCTATGCAAGATGCTTCGAGAGCTAGATAC 76653 30 100.0 37 .............................. ATTTTATACTTCTCAACAATGATCTTTTTCTCTGTCA 76586 30 100.0 37 .............................. TCTGGTATTATCCTTTCATGAACAAGGTTGAATCCTT 76519 30 100.0 35 .............................. TTTCCAAATCCGAACTGTCCGCCATTTCCGAACTG 76454 30 100.0 36 .............................. AAGATACTAAAAAGGCTAAACAACTGTTTTAAGACA 76388 30 100.0 36 .............................. TACTATATTTTTGTTCAGTAACGCTGTCCCCCCTTT 76322 30 100.0 37 .............................. CTAGTCATAAAAGAAAGTATACTTTGAAGTACATCTA 76255 30 100.0 37 .............................. CAAAAAACCTCTGTCACACTTTTTTCTTGACCTGTAG 76188 30 100.0 37 .............................. TTAGATGTTGAATTCTTCATGGACACAGATTGTTTCG 76121 30 100.0 34 .............................. TCCAGTACATCTTCCTGTTTCTCAAAGTCGTTTA 76057 30 100.0 37 .............................. TCTTAAAAGAGATGTTTGAAGTTAACGGTTCTGATGC 75990 30 100.0 36 .............................. AGTGCTATTCGGACAGGTCAATAAGCTTGATCGTGA 75924 30 100.0 37 .............................. GAAGGTGACAATACTTATAATGTAATAGATTTTGAAG 75857 30 100.0 37 .............................. AATGATATATGGTATAGAAGAGGGTTAAGTGCCACTA 75790 30 100.0 37 .............................. TTGTACACGGAACGCAAGACAATAGCGATATACACAA 75723 30 100.0 37 .............................. ACAATTAAACCATTTTCAATTTTAAGTGCGTCCGCTC 75656 30 100.0 36 .............................. GCTTTTTTAATTACGCATCTTTGACCGTTAAAATAT 75590 30 100.0 37 .............................. ATTGTTTTAATAAATTATCTAATCCTCTACCATCTTT 75523 30 100.0 37 .............................. TGTCTTCCCCAATCAGCCTCTCTACTTTTAACAATAG 75456 30 100.0 36 .............................. GCTGGTTTTAATCTAAAAGGTGATTTTATAAATAAT 75390 30 100.0 36 .............................. AACTTCCAAATCGAGTACATGATGCATATCAGGGAT 75324 30 100.0 36 .............................. AAAATTAAAGAGGACACTAAAATATTATAAGTAGTA 75258 30 100.0 36 .............................. ACCATCTATAACAATAGATAGTCTCATTTCTTCATC 75192 30 100.0 34 .............................. GAACTCAAGAAACTTAACACTTCTATCGAACTAA 75128 30 100.0 35 .............................. TTGTAATCTAATTCTACTAGCTTACAGGCTAGTTC 75063 30 100.0 36 .............................. GTAGAATATTCCTTGGCTAGAACAAGATATCTAAAT 74997 30 100.0 36 .............................. TTTAACCAAACAGAGTGTTAGTTTAAAAATGAAGCT 74931 30 100.0 35 .............................. AGCTGTTGCATCGTTATAGGTTGCCAACCATTATG 74866 30 100.0 37 .............................. TAGGCTTGTTCTTGAGCCACTACACAACAGTTAAATA 74799 30 100.0 36 .............................. AGATTAAAAAGATTTGTTATTGTAGTTACTAGTTGA 74733 30 100.0 36 .............................. TTACAAAGTAGAGGTTAATGGTATTAACCATTACAT 74667 30 100.0 37 .............................. TGCGAATCTCCTGGATAAGAGCCTCACGTAAATTCGG 74600 30 100.0 34 .............................. CTTGACAGTTTATCCATATAATTATTGCTGAAAT 74536 30 100.0 36 .............................. CAGCGTATGCCTGCGTGGGCAGAAACGCAAGAACAT 74470 30 100.0 36 .............................. TTGTATCTAGCATCTAAACCAGCTTTTTCACTATTT 74404 30 100.0 37 .............................. GATTTAATGGTTACAAAACTTAATGAAAAACTAGAAT 74337 30 100.0 36 .............................. ATTGAAGGTAACGCAGGAACTATAAACGGTGAATCA 74271 30 100.0 35 .............................. CGGATAATACCCCATCATTTACATCAACCACAGTT 74206 30 100.0 36 .............................. TCGATATCTAATAGGATGGATAGATTCGATGGTTTA 74140 30 100.0 37 .............................. CAAGGAAGAGGGATTGAAATTCTTTCCCCTTTTTTAA 74073 30 100.0 36 .............................. AATGGAGTGCTGCTATCATTTTACTTCTAGCAGCAC 74007 30 100.0 36 .............................. ATGTAAATAAAAAAGAGTTCATGAAGCTGTGGTTTG 73941 30 100.0 36 .............................. CTTTTAACGATGATGACTGTTTAAGTGCTTTGATTA 73875 30 100.0 35 .............................. TTGGCTCTACTAGGTTACTCTTTAGAATTGGTTAA 73810 30 100.0 36 .............................. CAGTTATCTCGTAAGGTAGAAGACAGAGGAGGATTA 73744 30 100.0 34 .............................. TCTATCACAGACACATGGGCATTAATACCATCCT 73680 30 100.0 36 .............................. CAGCTCCTGCTAATCCTGATAGTAGATATGTGCAGC 73614 30 100.0 37 .............................. CCGATGTGCGTTACTGAATTAGGGATAGTTACCTCTG 73547 30 100.0 36 .............................. ATATAAATTGAGCGGTTTTCTCCTTGATTTTACCCC 73481 30 100.0 37 .............................. ACTGTTGTTGCAACCTCTTTATTATTATTAAATGAGA 73414 30 100.0 37 .............................. TAAGATTACTTTACTTTAAAAAAAGATTGCTACAAGA 73347 30 100.0 37 .............................. ATAAATAATTCCTTATTTTTTGCTTCAATATAATTAA 73280 30 100.0 37 .............................. CTTATTTAAGTGATCCCTATATAGTAAACCAATCTAA 73213 30 100.0 36 .............................. TTTATATCGGCATATTTATTTAAGTTATTAACCTTC 73147 30 100.0 36 .............................. CAAATTGCCTTGTGTACTTGACAATCAAACCAAGAT 73081 30 100.0 36 .............................. ATAATCTAATTAAAAAGATAGTACCTACTGCTAATT 73015 30 100.0 36 .............................. TTAATAAGAGTAATGCTATTATTTTTTTCATCTTTA 72949 30 100.0 37 .............................. TTAGATTGTAGTAGTAGAATGTGGGATAGTGTTAAAG 72882 30 100.0 37 .............................. AGGTCAGAACAGACCATTTGAAGTAATGAACCCTTAC 72815 30 100.0 37 .............................. AATAAACCTTCTATCTTAGTTAAGGTTTTTATTCCAG 72748 30 100.0 36 .............................. ATAAAAGATGGAATATCTTTTTTAGATTCTACTGGT 72682 30 100.0 35 .............................. CTCGGTAAGTTAATGACTAATTTACCGTGTGAACA 72617 30 100.0 36 .............................. AAATTATGCCAATGAGCAAATGAAAAATGCCGAAGG 72551 30 100.0 36 .............................. GCAGGAGGTACTTATGTGATGAGACTATTACCTAGC 72485 30 100.0 36 .............................. TTTGATGAAATAGATGATTTTAAAGAATTTGAGAAT 72419 30 100.0 36 .............................. TCAAGTAGGTCGTGTTATTTGGGAGTCTTACAACGA 72353 30 100.0 36 .............................. TTGTAAAGGGTATATTTTCTTGAGTTTCAATAAACT 72287 30 100.0 37 .............................. ATACCTTGCTACTTTATAGTCGAATTTAATAGTACAA 72220 30 100.0 37 .............................. TTGTGCATGGTACTCAAGAGAGTGGAGATGTATATAA 72153 30 100.0 37 .............................. ATAACTAATCTTAAGTTAACAACAGCTATACAATCTA 72086 30 100.0 37 .............................. GCATACTTAAAGACGATGAGTAATGACTCCAGTTCTT 72019 30 100.0 36 .............................. AGGATACAGTGAGGAATATGTGGTTTTAACCAATGT 71953 30 100.0 36 .............................. TCGAATGATTTATTTAATATACTCATATTACTTATT 71887 30 100.0 35 .............................. GATAATTGGGATATTCCATTACGGAACTGTGCGAA 71822 30 100.0 36 .............................. AAGATATATATGACTTCATGGAGCGTGGCGATGTCA 71756 30 100.0 36 .............................. GAAGTAAACTGTCGGCCATCTTGATCTCTATAAGTC 71690 30 100.0 36 .............................. GATGTTTTTTTTATTGTTGAATATACAAGACCTTCT 71624 30 100.0 36 .............................. CTAAAAAAATAAAGGAACTAGGTGCGCTGCATGATA 71558 30 100.0 35 .............................. GAGGTTTTTATACACAATCTACTTTGAAAAAATTG 71493 30 100.0 37 .............................. TTGTCTGATCGCTTTATTTTCATTCCACGACCTGCAA 71426 30 100.0 36 .............................. GTAGAAGACTTGATATAATTTTTAGCTAATTCTGCT 71360 30 100.0 37 .............................. GGGTATCTATTAGTTACTTTACCCCATTCATATCCTA 71293 30 100.0 36 .............................. ACAATTAAGGTCGCTTTCTCTACCTTGGCATAGAAG 71227 30 100.0 37 .............................. GGTGTTAGTAAGGAGTAATCTATACCATCTATATTAG 71160 30 100.0 36 .............................. AAAATACTAAAATTGTAAACGGAAAAAACAAACACG 71094 30 100.0 37 .............................. TCAGTACCTAATGACTGATAACTATACAATACTTCCT 71027 30 100.0 35 .............................. TCTATAGCTAAGTAAGTTCTTTTTGTGTTAACCAA 70962 30 100.0 36 .............................. ACAAGGTGTATTACGCACCATTGGACTACTTCGAGG 70896 30 100.0 36 .............................. AAGCAAAGCTTTTGCTAAAGAATTAGTGGATGGGTG 70830 30 100.0 36 .............................. ACGTACTTTCCATAGTGTTCCATTAGCACCTCTATT 70764 30 100.0 37 .............................. CTTTACCATTAAATGGATTTACACAATGGTCAGTAAC 70697 30 100.0 36 .............................. TTGAATTTAGATAGATTAGTCGCTATTGGTAAAGAT 70631 30 100.0 37 .............................. TTGTTTGGCCAACCACTCCAATTAGTATTTGCTGATC 70564 30 100.0 36 .............................. ATAGATATATTTTATATCATCCACGAAAATGAAGAA 70498 30 100.0 37 .............................. ATGCTCTAAATGGGGGCAACATACAGGTATTGCGCAA 70431 30 100.0 35 .............................. ATCTAACGATAGAGGAGTTCGCGGTGGCTGATGAT 70366 30 100.0 35 .............................. CTAGAAAAAAACACAGTATCATAAATACCTAATAC 70301 30 100.0 34 .............................. TTTAATAATCGTCGTGTATCATTCTTAATATTGA 70237 30 100.0 35 .............................. AAGAGAAAAAGAAAAAGAAGGAAAAAGAAAGAGAA 70172 30 100.0 36 .............................. AGATATCACAACGTGCTGACTATGCCTTATCAGGAC 70106 30 100.0 36 .............................. GATTTTGTTGATCAGTATTTTTACACAGATGAGACT 70040 30 100.0 35 .............................. CTCCAGAACTTAATGCTGCTATTGGTGATATTATA 69975 30 96.7 37 ..........T................... GAACCTCCGTTCGCTTTGCCCGAATCGGATATATTAC 69908 30 100.0 36 .............................. GCATTAGCCATTGAAAAGAAAACAGGACTTAACCAT 69842 30 100.0 36 .............................. ATTTAGGTTTTGTTTTACCATATAACTTATTGGTCT 69776 30 100.0 37 .............................. TAGATATCTGCATCTCTCACTTTCTCTAGGCTGGCTT 69709 30 100.0 35 .............................. CATAGTAAAAGAGAAAGGTTTATATTTTGCTAAAG 69644 30 100.0 35 .............................. CATAGTAAAAGAGAAAGGTTTATATTTTGCTAAAG 69579 30 100.0 36 .............................. TATTTAGCAGAATAATCTACAAATGATAATCTAAGA 69513 30 100.0 36 .............................. ATTTACTGAGGCTGGAATACCTATGGTAGCTGAGCT 69447 30 100.0 35 .............................. TCTGAATAATGTACTTTATATAAGTGATAAGGATT 69382 30 100.0 34 .............................. AAAACTACTTTGAAAAAATAAACATAAAAAACAT 69318 30 100.0 36 .............................. ATACTAATTCCTCCCATGCTGAATCTTTTAATTTTC 69252 30 100.0 35 .............................. TCTGAATAATGTACTTTATATAAGTGATAAGGATT 69187 30 100.0 37 .............................. TTAGTTATAAAGGTATTACCTGTGTTATATACATCCT 69120 30 100.0 36 .............................. TTCCATCCGTGCAATTTTCCATTAAAAAAGCTACTC 69054 30 100.0 36 .............................. GATGTATTAGCAAACCAATTTAACACGCTTTTTCTT 68988 30 100.0 36 .............................. ATGTCAACCATAATTGATAAAAGATATTCTTTATGA 68922 30 100.0 37 .............................. TTGTATTTAGACATTAATAAAGCATCCTGTAAATCAC 68855 30 100.0 36 .............................. AAATAATGAGGGTATTATTTATGCTGGTATTGATGG 68789 30 100.0 36 .............................. TAGTCTTAGCGACAACGATAAAGAAGTCGTTAAAGG 68723 30 96.7 36 .........A.................... GCGTTAATCGCTTCCAAAATTGGAAGGTGTTTCGCT 68657 30 100.0 37 .............................. TATAGTGTTAGTTCGTTTAGTATGTTCATTATTTACT 68590 30 96.7 36 ........C..................... GATCCAGAGTTTGATGAACTTGGATCGCTTGAAATT 68524 30 96.7 36 ........C..................... TGTGTTGAGAAAATTATTGTGTTCAACTCGTCTTGA 68458 30 86.7 37 A.C.....CT.................... CATACACCCAGTCCTGAAACTTCTGTGTATACTCCTG 68391 30 96.7 36 ........A..................... AAGTAATCAAACATTTCCATTGCGATATCCTTTGAT 68325 30 96.7 37 ........C..................... AACACAGGTGCTTCAACTCTTGCATTTGCTCCATCTT 68258 30 100.0 35 .............................. ATTGCAGACCCTTGAGTTGGTGCTTCTTTTATTTT 68193 30 100.0 36 .............................. AAAGAAATTAATGTTTCTGTCTTTGTCTTTTTTACA 68127 30 100.0 36 .............................. TTGTGTACTGCTAAGTGTTCTTCTCCTTTGTGCTTA 68061 30 96.7 35 .............T................ GAGGTAAATTGTCGGCCATCCTGATCTCTGTATGT 67996 30 100.0 37 .............................. ATGATACGAAAAGCAAAGTTAATATCTTTTTCTTGAC 67929 30 93.3 36 .....................A.......G ACATTATAAGGAAGTTTAAACTTCCCTGCTGGAGAA 67863 30 80.0 36 ...C...TCA...........A.......G AGTATAACTACTTCAGTATTATCAAGCTTAACATTA 67797 29 73.3 0 ...C...TC............A.AC-...C | ========== ====== ====== ====== ============================== ======================================= ================== 177 30 99.5 36 CTTTTAACTGCACCATATAGGTATTGAAAT # Left flank : AAGAGTATAAACCATTTAAAGCTCGTTGGTAATGTATGTGATTTTAGTATATGATATAGGGGAGAGGAGAGTAGGAAAGATGCTCAAACTATGTAGGCGTTATTTGAATTGGATACAGAACTCTGTCTTTGAAGGAGAGATTAGTGAAGTGAAATTAAAGGCACTATTAGCTGAAGCGAAAGAAATTATGAACAAAGAGGAGGACAGTGTAATTATTTTTAAAAGTAGAGAAGAAAGATGGCTTGAAAAACAAGTAGTAGGTAAAGAGAAGAATGAATTGGATAACTTCTTGTAGTCGTCGATGATTCAGCTCTCTTGAAAATTTGTTCTTTGAAATATCGTAATTAATGATTAGGTGTTGATAATTAGTTATTTATATGTTAGTCGCTCTAAGGGAGAAAATCGGTTATTATAGAGCGACTAATTTTTGTGTTTAAAAAAGAAATAAATATATTTGTGAAGCCTTGTAAATAGGCTTTTTTATGTCGTGTATTTCACGG # Right flank : AACACCAACAAAAAAAAACGCACTATATAAGTGCGTTTTTCGTTAGTAAAAGGGTAATAATTGAAGAGAAAAAAATATCTATTTAGCAAACTTCTTACTTGCAGCTACACAAAGAATCACTCCGAAAGTGACGTATAGCATCGTAGGGCTTACTTTTTCGTTTAATACTGTTGCCGCTAATATCATCCCTAATAGCGGTTGTAATAACTGGATTTGACCTACTGTTGCGATTCCTCCTTGTGCTAATCCTTTATACCAAAAGATATACGCTAAGAACATACTCACAACAGAAATATAGAATAGTCCAAACCAAGATTCTCCACTTACTAGGACTAAGTCTGTAGGTACCGTATAAATCATAATCGGCACTGTAAGAGGTAGTGAGATAATACACGCCCAAGAGATTACTTGATATCCTCCTAGTGTTTTAGATAGTTTAGCTCCTTCTGCATAGCTCTGTCCGCATAAGATGATCGCTAAGATCATTAGGACATCCCCGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAACTGCACCATATAGGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [25-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA //