Array 1 43841-44402 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PZHU01000018.1 Staphylococcus hyicus strain SNUC 5426 contig018, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     43841	    36	 100.0	    30	....................................	GTGCCTAATATAGTGTAATCAAATTGCTGT	
     43907	    36	 100.0	    30	....................................	TGAAAACTTAAAAGGACTGGTAATGAATGA	
     43973	    36	 100.0	    29	....................................	ACACCGACGAATGATAGACGGGTTGATGT 	
     44038	    36	 100.0	    30	....................................	AGAAACTAATGCAACAATGCAAGCCAGATT	
     44104	    36	 100.0	    30	....................................	GTTAGAAATTTAATTAAAAGCCTTGACAAA	
     44170	    36	 100.0	    30	....................................	ATATATATTTATGTCTAACACTAATGTCTT	
     44236	    36	 100.0	    30	....................................	AGATTGCATGAAGCAATTTTATCAAATGGC	
     44302	    36	 100.0	    29	....................................	TTTTCCAGTTCTTAAATGTTTCTAATGTG 	
     44367	    36	  91.7	     0	.......................T....G......A	|                             	
==========	======	======	======	====================================	==============================	==================
         9	    36	  99.1	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC	                              	       

# Left flank :   GGCGTTCACGATGTACAATAACGCCATCTTCATTTTCTTTTTCATTATTTTCAGTGTGAGCTGCAGCTATAGTTAAAATGTTGTTATCAAAATCAACGTGAATGTCTGATTTTGCCATACCTGGAAGTTCAGCGCTGACAACATATGCATCTTCACGTTCAGAAATATCTGTTTTAAAAGCTTGAGATAGCATTAAACCTTGCCCAAAATCTTTGAAAAGATCACTCGGGTTCATATCAAAAATAGAATGATTAAATGGTTTTAATTGGAATGCCATAAAGCATCGCTCCTTCATATTTTAGAATGTCGCAAATATCAAGAAACTGAAATGTTAAAGGTCACATCTGATCCTTTACAATCTTATTATATGGCAAAGGTCAAAGATAGTCAAGGTTAAAGTGATATGATTGATGTAAATTGAAATTTATCCAAAATACATAAAGATCAGTGATATCAATGGATTAGACAATCTTAAAAGTTATAGTATACTGTAGCTAGAG
# Right flank :  AAAGAATAGAATTGGCGTTGTGCGCAGATAGCTTAGTACTTTGTGATTTTAGGTATTTTTATAAGTGTGCTATACATGAAATATATATGCGATCCACTTATTTTAGGGGTAACCCCATAAAATTGTTTAACTCAAAGAAACTAACGTTGTTTAGATAGAAGTTATAACACTCACTCCACAAAAATATCAGAAAATTCTTGACTCAAATGGATCTTATGATAAAATAAATTTACAAGTACTTATTTGTGCTTATACCTAAAATTACAGAATCTACTAAAACAAGACTATATGTCGTGTTTATCCCACTAATTTATTAGTGGGAATTTTTTTGTTCTTCTTTTATAATAGAATTTAAAAGGGAGGGCAATGTATAAATGAATAATTATATACTAGGACTCGATATAGGTATTACCTCAGTTGGATACGGTATTGTAGATAGCGATACGCGTGAAATTAAAGATGCTGGGGTACGTTTATTTCCAGAAGCGAATGTAGACAAT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.60,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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