Array 1 622870-625330 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT594621.1 Culturomica massiliensis strain Marseille-P2698T, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 622870 30 100.0 36 .............................. GCTGGTAAGCCCTGAAAGGCAAGGCCGAAACATAAT 622936 30 100.0 37 .............................. AAACTAAGATTAAACAAATTTCGTCTAGGTTTTTTAA 623003 30 100.0 35 .............................. AGTTAAAAAATGTTAAATATAGACACCGTATAAAT 623068 30 100.0 36 .............................. AAGCTCTTTTACGAATAACAGTGTTCGAATAAGTTT 623134 30 100.0 35 .............................. TTTTGTCAATATTATGTTAACTGTTAAATGTTTGA 623199 30 100.0 35 .............................. GTTTCTTCGGGTACTTTGGTTTCGAATGGTTCCAA 623264 30 100.0 36 .............................. TACCGAGGAGCAGATGAAGCATTACCAGTCGAACCC 623330 30 100.0 35 .............................. GCTGGTAAGCCCTGAAAGGCAAGGCCGAAACATAA 623395 30 100.0 37 .............................. ATAATATTTAACCTGCTCCGAAGGGTCAGCAGGATTA 623462 30 100.0 35 .............................. ATAATATTTAACCTGCTCCGAAGGGTCAGCAGGAT 623527 30 100.0 36 .............................. ACCACTCCTGCAACTTCTGTGCAGCACGCAAATCAT 623593 30 100.0 37 .............................. AAAGTGAGCTTAGGAAAACACAGGTTGACTTGGTTAA 623660 30 100.0 36 .............................. TTACTAATACGGAGAAGTTAGGTAAGGAACATATTG 623726 30 100.0 36 .............................. TTAGAACGCATAGGTTACAGACTGTAAGTTGCTATA 623792 30 100.0 36 .............................. GATGATATACGACAGGGTTAAGGATGGTTCCTATTC 623858 30 100.0 36 .............................. ACATCACCCTTCGATTCCTTTTTAGGGGCTTTGTCA 623924 30 100.0 36 .............................. AAGCTTCTAAAACTGTGAAACAGGTAATGGAAGCCA 623990 30 100.0 36 .............................. ATATTCTGATCCCCTTTTCCATCAGCCTTTACCCAT 624056 30 100.0 35 .............................. GGGTTTCCAATTCGCTACACCCGTAACCGTTCCTC 624121 30 100.0 35 .............................. GGAGATTTGTTGTCCGCCAGAACTACGAATACGGA 624186 30 100.0 37 .............................. ATGATTTGCAATTGCAGACCAAGGACAAAAAAATCCG 624253 30 100.0 35 .............................. TTATCGCCGTAGGTTTCATACACCCCCCTTTCAAG 624318 30 100.0 36 .............................. TGGGTTCAAACGGCGTTGCATCCGGCCGGCATTTCC 624384 30 100.0 35 .............................. GTTTAAACACGAGGTAGAACGGATACGCGCCGTTT 624449 30 100.0 36 .............................. ATGCTTTCCAATGCCTGACTAACGGTAATTTGATGG 624515 30 100.0 36 .............................. ACAATTTGAAATATGAAAGCAGATAAAAAGGCTATT 624581 30 100.0 34 .............................. CACTCCAGCAGGGCTTTTATTGTTGCCTGATCCG 624645 30 100.0 36 .............................. TACTTTTCGGAAGTTTTTCGAAGAGCATGGCTATGT 624711 30 100.0 36 .............................. TCGATTTCCTTCCTAAACAGATCCAAAGTTAACTCG 624777 30 100.0 35 .............................. TCTGGGAACAATAATTGCGGTGGCTGCCACCTTCA 624842 30 100.0 36 .............................. ATAACAACAGGAGTATTTATTTCGGCACGCTTACAA 624908 30 100.0 36 .............................. AAGATGTAAAATGTGCTTTTGTAGATGGAAATAAAA 624974 30 100.0 36 .............................. GGTGTATATTTTTTATCTAAAAACATATCACCTTTA 625040 30 100.0 36 .............................. TCCTGTACATTCACTTGTACATTTTCTTTACACAAC 625106 30 100.0 35 .............................. ACCTGTTTAAAGTCATCATCGCTATTGCCTTTCCT 625171 30 100.0 36 .............................. TTTTTAAAATTTGTGCGATAAACAAATTCCGTATAT 625237 30 100.0 34 .............................. TAGCAACAAATCCCCTAATTTCCTGGCATTATCA 625301 30 90.0 0 .........................A.G.T | ========== ====== ====== ====== ============================== ===================================== ================== 38 30 99.7 36 CTTTTAATTGAACTAAGGTAGAATTGAAAC # Left flank : CTTAAAAATATGGTGGTGAAATGTATGTGATTTTGGTATATGATGTGGATCAGAAAAGGACGGCAAAAATGTTGAAGTTGTGTCGACGTTATCTTTCCTGGATTCAGAATAGTGTATTTGAAGGGGAGATTTCTGAAGTTCAATTAAAGTATTTGGTCGTTGAAGCTAAAGAAATAATGAAAGAAAAAGATAGTCTGATTTTATTTAAAAGCAGGGATGAAAAATGGTTGGAAAAGGAAATTGTTGGGGATGAAAAAGCCAGTGTCTCGAATTTTTTGTAGCGTCAACCTATTTAGAGATATTGGCTATTCGAAACCGATTTATTAGATACTTGGGAAAAAAGTCCTTTGACATATTGAAAATAAGCAAGTTATAAATAGTCGTCGAAAGTCGGGGAAAATCTAAGAATTGGAGGTCGACTGCAAATAACTGTAAAAATTAACGGTTGCTTAGTTGATAAGATGTTGATTTTCATGTATATTCCAGGCAGTATTTAACGG # Right flank : TTTTTGATCTAATGTGTATTTTTGTTTTGTAAGCGGTTTTTAATTGAGTCGATAGGTGATTATCTATGGAAAAAATAATATCTTTGATATTCTGAAAAGTAGGTAGTGTTTATGAAAATACGTTCTCCATACGATAGGGGTGATTTGCATATCAAGAAACGTGACAGGGTGCTGGAGATTGGGCCGGGGCACAATCCTTCCGTGCGCTCTGATGTGATTGCCGAAAAGTTTGTCGATTCGAATTATCACCGTTGCGGGGATATGAAAATCTATCCTCACCAGACATTTATCGAGGCAGACGGTGAAAATCTTCCGTTTAAGGATAAGGAGTTTGATTATGTCATTTGTAACCAAGTACTCGAGCATGTGGAATCGCCGGAAAAGTTTATTGCCGAGCAATGCCGGGTGGCTAAACGGGGGTATATCGAAACGCCGAGTTTGTTGGGAGAATTTTTGTTTCCCAAGTTGTCGCATAAATGGGTTATCCTGGATATCGATAA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATTGAACTAAGGTAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 993765-992376 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT594621.1 Culturomica massiliensis strain Marseille-P2698T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 993764 29 100.0 35 ............................. AAATTTGGTCGATGAGATAGAATTTTCTCGTGATT 993700 29 100.0 35 ............................. GCTGGTAAGCCCTGAAAGGCAAGGCCGAAACATAA 993636 29 100.0 35 ............................. TATTTGTAAGCTCTTTAATTCTATGGGTCTTTCTC 993572 29 100.0 35 ............................. GCGATATCTTAAAAGACTTCGTAAATTTATTTATC 993508 29 100.0 36 ............................. ACCTTTATCTCCTTAAACGGAACAAAACGAGCCTTT 993443 29 100.0 36 ............................. TTTCTAGCCAGCGTTGTAAGGCATTAGCCCTACGAA 993378 29 100.0 36 ............................. CTTTCTTTTGCATAGCAAATCTGGTCAGAGAAGATA 993313 29 100.0 36 ............................. AAATAAAAGGCCCTATTTTGATAAGCAGTCAAACTT 993248 29 100.0 36 ............................. TTTTTATTCTCGGTTCTTACTTTAGAAGCAGAAGCC 993183 29 100.0 36 ............................. AGTCCTGTTTTATCTTTATAAAATCTGCGGAGTTAA 993118 29 100.0 36 ............................. CGGGAAATAACAGCCTGCTTCAATAATCCATCTTTA 993053 29 100.0 36 ............................. CGGCAGCCACGAGGTCCCGAAAGGAACCGAAATCAG 992988 29 100.0 36 ............................. AAAAGACATCTTGTATATCCTTCGAGGTAAGTATGT 992923 29 100.0 36 ............................. AAGTAAAAACCCTAAAAACGATAAATAATTATGGGA 992858 29 100.0 36 ............................. AATGCTGAAAGGGTATTTCTCAGTTCAAGTGCCAAT 992793 29 100.0 35 ............................. TCCGCTGCGTATACGCTCTCCTCTCCGGGTATCTG 992729 29 100.0 36 ............................. TTACGGATGCCGGCGGAGCTTTGAAAGAAATGGCTG 992664 29 100.0 37 ............................. AGAAATACCAAACTTGCAAATGCCTTGTCTGCTTCTG 992598 29 100.0 36 ............................. TTTATATCCGCATCCCTTAGCCTTATATATTGCGAA 992533 29 100.0 35 ............................. CTACAATAACTCGTCTAACAAGGCCAGGTTATCCG 992469 29 100.0 36 ............................. TTGTTGAAAGTCGAGCTGCATACCCATTGTCCGAAA 992404 29 93.1 0 ........................A...T | ========== ====== ====== ====== ============================= ===================================== ================== 22 29 99.7 36 CTTTTAATAGAACTAAGTAGTATTGAAAC # Left flank : GACTGCTGTAAAAGAAGTGGATAAAGAAGGTGTTACTACAACCGATCTTCGTCCGGCAGGTAAAATTAGAATAGAAGGAGAGATTTATGATGCCGTATCTGCCGAGGGGGATTATATTACAAAAGGAAGCCGGATAAAGGTAGTCGATTATCAGGCCGGACAATTGTATGTTGTGAAAAGTGAAGATTGATCTTTGATTTCCGATTTATGATTAATCGGGTAGGAAAGAATATAAACTTCTAAAAATAAGGGGGAGAGATGTATGCAATCCCCATATATAATGTCGACCTATGGGAAAAGATCGGTTGTTTTAGGTCAGATTATTGAAGATTTAGATAAAAAGTTCTTTGACGTATTGATAATGAATAGATTGTAAATAGTCGTCGAAGGACGGGAAAAATCTAAGAATTGCAGGTCGACTGCAAACAACCGTAAAAAACAATGGCAATATAATTGATAAATAGTTGATTATCAAATTTGTATGATATGATATTTAATGC # Right flank : ACTGTTGGCTATACTACTATCAGGGAATACTGTATCTTTTAGAATCGTCGATTTATAATGGCTTTACTTTTCTCAACGGCGGCAAAGCCGCGCTTGACAGAAACGTAGTTACTGACTTCGTGGACTGTTTTGCCGGTTGATGATCCCATAGAACATCAGATCGATATATTCCAATATGGTACGGGAATTTTTATCTTTCCGGTTGGCCAGGATAAAAGCTTGCTCCAGGCTTTTAAACATGAGCAATAAGTTTTGTGAGAAGATACGGGGATCACTTACCCGGAAAATGCCTTTTTCTTTGCCTTCCCGTACAATTCCCGTAAGCAATTTGATTTCTTTGCGATCTATATCTTGCCGTAGATGTTCCACACGGATATTATTGAAAAGGAAATCGTAACGGATATAACGGTTACTTCGTACTAAACTGTCGATTACCCCAAAATGTTGCAAGATATACAATTTTAGACGTCTGTCGGGAGGAAGAGGCGAATCTGCAGCTT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATAGAACTAAGTAGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 3 2049406-2048339 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT594621.1 Culturomica massiliensis strain Marseille-P2698T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 2049405 35 100.0 35 ................................... AAATATCTATCCAAAGATGTAATATCAACATCTAA 2049335 35 100.0 34 ................................... ATTTTACCGCTGTACGTTGTTTAACTTTTTATAA 2049266 35 100.0 33 ................................... ATGATACCGGCATTTTGTAAGTCTGTGGCACAG 2049198 35 100.0 33 ................................... AACTCTTCTCGGGCGATGCCGTAGATATCGTAA 2049130 35 100.0 34 ................................... GTATCATTAGCAGATAATACCGGTTTGGTTGCGT 2049061 35 100.0 34 ................................... AGTACGTAAACGCCACAATCACTCCATCTTGAAC 2048992 35 100.0 33 ................................... TATTCATGGTATCCTCGGTAACTACCAACGTTT 2048924 35 100.0 34 ................................... ATAAGGTTTCAACTTTTTCTTATCGCTACGCTCA 2048855 35 100.0 34 ................................... ATAAGGTTTCAACTTTTTCTTATCGCTACGCTCA 2048786 35 100.0 34 ................................... ATAAGGTTTCAACTTTTTCTTATCGCTACGCTCA 2048717 35 100.0 36 ................................... ATGATTATCAAATTCAGTCATCAGCCCCTTTTTATT 2048646 35 100.0 32 ................................... GAACTCTTGGTTTCTCGTCTTAAAATACAAAA 2048579 35 100.0 34 ................................... CCAGAATGCTCGTATCGAAGCAAAGCTTCAACCG 2048510 35 100.0 33 ................................... AAGCGGTAATCAACATATCCGCCGTCATCGTAA 2048442 35 100.0 34 ................................... TTGATATCGAACAATAAAAAGGTAAAAAGAGCCA 2048373 35 91.4 0 ................................AGT | ========== ====== ====== ====== =================================== ==================================== ================== 16 35 99.5 34 GATTTAGAGAATAGCTGTAATCACGGCATTGAGAC # Left flank : ATCGTGAGATTACCTAAGCGAAAAGAGTATATAACTAATGTTTATATGGTATGAACATTTGCGAAAAAGGGGAGATCTGTAATATGTCTGATAGCGAAGTATAAAGTACATCGGTTGCATAGATAAAAGATATTATTTTTTCGCAAAAGAAATATCTATGATTTTAACGGTTTTGATTTGCGAAAAATGGATATTGAATGATAAAAAGTTCTTTGATGTATTGCATTGTAAGTAAGTGATTTATGTTTTTAATAAAAAGGAAGATTTCGCAAATTATCAGTGAATGATAAAATTTGTAATTGGTTTCGAAATACATCTGAGTCGTAATTTGTTTATTTTTAATGTCTTATATTGTATCTATCGCATTTTTATAAATGTTTTATTAAAAAAAATATTACTTTTGCGAAAGATGATAAAATAAAAGAAAAAAGTTTGGTGGAAGCGCAAAGAAAGAAAAATATGAAATGTAAAAATTTTTAGTTATTATTGATAATGATGAG # Right flank : TCTGTAAAGGCTTTAGGATTGTAAAGTTAAGTTGTTGTAATGATTTCTAGAGGAAGGGGAGGTAGGAAGAAGGGAATGTTAGCTGATTGGTTTAAAATGAAAATGGCGTTGTCCGGTTCTCCGGATAACGCCATTTTTTGTTGTATCTTAAATTATTATTTCACCCATACGTTCAGGATTTCGCCGATGTACATTTTGTGCATGGGTTTGCCGCTCCATTGTGTTTTTAGGGTAGGATCGGCGAGGGCTTCGGGGATTAGTGACTGGGATACCAGTTTTTTGCATTCGAGGATAAGCCAGGCCTCGGAGAAGGCTTTGGCTCCGGAAGGCGTGGTGATGGGGGTAAGGCCGGCTGCCTTTACCTTATCGCCGTCTTTACCGGAATTGTGACCGCAATAGTTCAATGCATCCCGGTAGGCTTCGGTATAGAAACTAAGAGTATAGGTATCTCCGGATTCCATCAACTGATAGGTATAACGGGCAGGATTAATGAAGCAAAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTAGAGAATAGCTGTAATCACGGCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 4 3462227-3461867 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT594621.1 Culturomica massiliensis strain Marseille-P2698T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 3462226 30 100.0 36 .............................. CATTATCACATTTTATTCTTTAATATTCCTGATTTG 3462160 30 100.0 36 .............................. ATAACCCCGCAAAACCTGGGATAATAAAAATGGGTA 3462094 30 100.0 36 .............................. CCTTTTCCTTAGTACGTACCATTAAGTGCCGGCATA 3462028 30 100.0 36 .............................. AGTCCGGACGGTTAAGAAGAAGTATACGGGCGACTT 3461962 30 100.0 36 .............................. TGGAAGCAATTAACACAATTAAATCAGACAAGCCTG 3461896 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 100.0 36 ATTTTAATAGAACTGGAGTAGAATTGAAAT # Left flank : TTACATATTTCAGAACCCTGATTATTTTACTGACCTACAAAGGTATACTTTAATCGGTAATAAAAAAACAACTTCAAATTTTGAACCTGTACTTCCTATTTATCAATCCGGCAAATACAACTATAATAATGTATCTGTTTTATCATTATCAATGGAAAAAATTAGACAACAACAATTCGTTTTATTCAAATTCCGATTTTAAACGACTATTTTTTACTAAATTAGACTCGCTAAAAAGCATTGTAAGTTTTAACCTTAACACAAAATAGCTTTCTTTGGAGGCGTCGGTCCCGCCAAAAATCAGTCCAAACAATAAAACTATTTCTGAAAACGGACAACACAAGTTCATTGATATGCTGAAAACAAACACCTTAACCCAAGTCGTCAAAGGTCAGGGAAAATAAAAGAACGAAAGGTCGACTGCAAACAATCCTAAAAACAAAACACACACAACCAATAAATATCTATATATCATATATATACCACAAACCACTTAACGG # Right flank : CAGATAGCTGTGGGGATTTTATTCAGGTCAATTTGTTTTTTAATAGAACTAAATAGAATTTCCGTCCGTTTTTATAGACAGCCGGAGAAAATCCATACCCGGGAATCCATTTTCCGGTCTGACGATTTTTAAACAAATACTAAAAAATACACAATCCGGGAAATCTGTATATTTTTGATTATCGAATCATTAGCGTTAGTATTTCTTTTATTTTTGTATCCTCATTGAGTCGAAACGACAAAAGCTGTAAGTAAAACACATCGGTCTGGCAACTCCAGGCTCAAACAAAAATAAATAACGACAGCAGCCGGAGGATTGATGTATAAAAACATATCCCGGTAAACTTTCGGCCAGATTTATCGGTACAATAATGTTATAATTTAATTTGTTTATCCATGACTGAAAGTAAAAGCCCTTCGTTTATACAATCCCTGCTTCCCGTGCTGATTTTGATCGTTCTGCTATTTCTTAATGTAAAATACTTTGAAGATCCGATCGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAATAGAACTGGAGTAGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //