Array 1 157826-158892 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAVD01000026.1 Streptomyces griseus strain NCTC13033, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 157826 29 100.0 32 ............................. CCGTTGGCTGACCAGCACGGTTCGCGCGCGAT 157887 29 100.0 32 ............................. ATCAGCGGCCCTGGAGGGTCTTGGCCACGCGG 157948 29 100.0 32 ............................. ATTGCTACAACCCCCCAGAGTTGAACATGCGC 158009 29 100.0 32 ............................. AGATCGGGACCGTTGGCCGTGGGCACGTTCTC 158070 29 100.0 32 ............................. GTCGCCGAAGCAGTTCGCATCATTCGACCGGA 158131 29 100.0 32 ............................. CGCCAGCGACAAGTTGATGTCCCGCTCTGCAA 158192 29 100.0 32 ............................. CTTACGTCACTTGCATGCCGCGCGGGAGGATT 158253 29 100.0 32 ............................. CAGAGGCACGGTGATGGCAGCGTGGGTGGAGG 158314 29 100.0 32 ............................. TGCACTCCGTCCGCGACGCCCACGGCCGGGTC 158375 29 100.0 32 ............................. GACTGCGGCTCCGTGACCATCGGCACGACGAC 158436 29 100.0 32 ............................. GATGTCGGCGACGGCATCCGGTCCGTGGCGTC 158497 29 100.0 32 ............................. CACTGCGACGCCAGCTCACTCGATGACCCGAT 158558 29 100.0 32 ............................. GGACCGCCGTCGGTGATCACGGCCGCCACCAG 158619 29 100.0 32 ............................. GCGGCAGCTACCAGTTCCGTGGCGTCGACTCT 158680 29 100.0 32 ............................. CGGCAGGGCCCCAGGAATTCGACAATCGCCAG 158741 29 96.6 32 ........................C.... GGAGCCGCGAGACGGCCGGCCGCACCCACCGC 158802 29 100.0 32 ............................. GAGCACGACCGTTCTGCGCTGTCGTGAGTCTC 158863 28 82.8 0 ..................TCC...-C... | T,G [158881,158891] ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.9 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : TACAGAAACCCCCTTGATCCGCGGAGACGCGATCAAGGGGGTTTCTGCGTTGGGTACCTGCTCCATGGCCCGAAGGCCATGGCTGACTAGCGGCCCTGCCCATGGCGGGACCATGCGCACGTGCGGCGTCCGCGTACGCGCCTGCGGACGAGACCACCGCAAGGAAGTCCGCCGTATCGGACGCGCTCACGAACCACCTGTCACGCCCCCTCTCTCGGCTGACCGTCATTTCCCCAACCGAGATCGCCGCCGCCGACGCGTCGAAGCCGCTGAGATGCGAGCCTGGACGGCCACCAAGCGTCCTGGCCGCGCTCGCGGTTGCCACGGTGACCACCACTCTCTTTTCAGGAGGCTGCTCTTATGGACTGAAGAGAGGCAGAATGACTGCTGCCGCACAGCGCTCTGCGAGTACGATCACCTTCGAGGTGGGCGATATGTCTCTTTCTGAAGAAGTAAGTAAATTCAGCTCCGTCACCTCATAAAACCGCAGGTCACGAAGT # Right flank : CGTGATCGTTGCGTAGACGCGCGGGGTCCACCTCAAGAGCGTCCGCGACCGCTTTGAGCACCTCGTCGCTGGACCGTCGGACACCTCGCTCGATGGCACGAACCATGGCATAGGAAACGTGGGGGGCGCCGCGAGTTCGGTTTGTGTGAGCCGGCGACAGGCGGCGATTCGCCTGCCGATTTCCTGCGGACTACCGAAAGACACCCGCTGACCGTACGCACACGAAGAGTTTCCGGCGGTAGATTCCTCTACTTCTGTGCGATCTCGATGAGTTACGTCAGTGACTGGATCACCCAGTCGGCAGTTGCGTGCACTTGGTGGTCACCGCCCCATAGTGCCCCCATGGGCCGCGGCGGATAGGGGCCATGCGCAGCCCGGCCTGGCGGCGGGGAATGCGTCGTTCACCGGGTGATCACCGACGTACACGGTTCCTCCCGCCGGAGCACCGGACGTGTCGAGGATCCGTTCGAAGAACTGCGCCGACGGTTTGGCACAGTCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 162036-163102 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAVD01000026.1 Streptomyces griseus strain NCTC13033, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 162036 29 100.0 32 ............................. GTCACCGCCGTCGACATGAGCGACGACCTGAC 162097 29 100.0 32 ............................. CACCGGTTGGACCGACAGCGCCGGCCGCGCCT 162158 29 100.0 36 ............................. ACCGGGCAGGACGTCCTGACCCGGGTGCGCGCCGAC 162223 29 100.0 32 ............................. ATCGCCGAGGCCGACACCTACGGGCCCGCCAC 162284 29 96.6 32 ............................G TGCTTGAGCAGCCCGAGCAACGTTGTCGCCGA 162345 29 96.6 32 ...........C................. TCGGGCGGGCGGAGCGGGCGCGCAGCACCCGG 162406 29 100.0 32 ............................. CGCGACCTGAACCGCATCCTCGGATGGCCCGA 162467 29 100.0 32 ............................. TCTCGCCCCGCCCCGCCGGGCCCCGACCGCAT 162528 29 100.0 32 ............................. GGGCGGGGACTGCGTATGGCGGGCCCCCTCCA 162589 29 100.0 30 ............................. GGCGCGCAGTCCCATGGCCGCGCCCCTCTA 162648 29 100.0 32 ............................. GCGACACCGCCCCTGACCACTGGAACAACACC 162709 29 96.6 32 ..............C.............. CCGCCGCCGGTGAGCCAGCCGAGGGGGATCTC 162770 29 100.0 32 ............................. CGCCGACCGACTGCTCAAGGCCCTGCGCGACG 162831 29 100.0 32 ............................. TCGGCGTGACCGGACCTCAGATGATGGGGGCC 162892 29 100.0 32 ............................. TGACGCTGACGCAACGAGCCCAGCAGCGCCCA 162953 29 100.0 32 ............................. AACACCCTGTTGTAAGAGGTTGATGTGAGCGA 163014 29 100.0 32 ............................. GACGACGAGAGGTCGTGGTCGTAGGCGAGCAT 163075 28 93.1 0 .....................C.-..... | ========== ====== ====== ====== ============================= ==================================== ================== 18 29 99.0 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : CCCCGCGCCTTCCTCCATCACCGCCTCACCCACAAAATCCCACCCCGGCTCACCACCGACCATGCACAACCCCCCGCCCCCACCCGCCGCATCCTCATGGAATGCACCGACTGCGGACGCCCCGGCCCACCGGAAGCCCTCCCCGACGGCCTCTGTCACCCCTGCCGCACAACCCACACCGCAGACCCCGAAAACACACCCCACCCCGCCGACATCGCCGACATCAGGGCCCACATGAGCAACCTCCGCAGCCTCCTCAAACCCGTCTGAGCTCAACAACCCGCCTGCCTCACAGCCCCGGCACGGACAGGCCTCAGCGAGGTGCACCGACGTCCTCCTTCAAGAGGCCGCCTCTCGCCGCCTTGGAAGGGCAGAATCACTCCCGACACGCTTAAAGCTTCGAGCAGGCCTATGCACACCAACCAGAGGGCGATATGTCCATTTCTCGGGAAGTTGTCAAAAAGCACCACGCGCCTGAGTAAACCCGCAGGTCACGGACT # Right flank : CATCCGGTCGACGGGGTAGAAAGACGCCCCCCTTTGCATGGGCCCGACGCGCAGGGGCGCTCCCCCACAGCACACTCGATCAAATACGCGCACTTGTATTCACTCTCGGTCATCGCGACCGTGCGGGACGTCGACGATGTCCAATACGCCCATGAGCCGCGATCATCCGGAAAGCCTTTCGGCATACGCCCGCCTGTCCCCCGTATCCCGCACCGCCTGGGGCAAGCACGATCGGCAGACCGAGCAGTGGCTCCCCCTCTGGCGGCACATGGCGGACAGCGCCGCTGTCGCGGAGCGGCTCTGGGACCAATGGGTGCCCGACAACGTCAAGGCGCTCATCGCGGACGCGTTCCCGCAAGGCGCTCAGGACGCCCGGCGAGTGGCCGTCTTCCTCGCCTGCGTCCATGACATCGGAAAGGCCACACCCGCCTTCGCCTGCCAGGTGGACGGGCTCGCCGACCGGATGCGGGCAGCCGGGCTCTCCATGCCGTATCTGAAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 173085-174392 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAVD01000026.1 Streptomyces griseus strain NCTC13033, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 173085 29 100.0 32 ............................. ACTACGCCCGCAGCCCGTACCCGATCAAGCCG 173146 29 100.0 32 ............................. CACGCACACACGGAGGCCCGCCATGGGTGACA 173207 29 96.6 32 ............................T CCTCGCCGGAATCCTCCTCGGCCTCTCCCAAG 173268 29 100.0 32 ............................. ACCCCCTGACCCCCGGGCTGCCCTGTCGCCCC 173329 29 96.6 32 ............................T TCGGCGGGGGTGTTGATCGGGGGCCCGTGCAT 173390 29 100.0 32 ............................. ATGCCCCAAGCGCCTATGTGCCGGGTCTACGA 173451 29 96.6 32 ............................T CCGCGGCGCTCGTACGGCATCCACTCGGCCCG 173512 29 100.0 32 ............................. TCGGCCTGTGTCAGGCGCCCATGTTTCTGCCA 173573 29 100.0 32 ............................. GTCCACTCGGGCTCGACGCCTTGTTCGTCGAG 173634 29 100.0 32 ............................. CGGCCGGACACGTACTGCCAGATCTCCGGGGA 173695 29 96.6 32 ............................G ATCATCGGCTGGACTACAGCCGCTTGGGACTG 173756 29 100.0 32 ............................. TGGACGCTCAGCAGGGGGGACATCGGCGTGAG 173817 29 100.0 31 ............................. AGGCCCTTGTGGGCCTCTTGTTTCGTGATCC 173877 29 100.0 32 ............................. CTGCGGCAGATCGCGGGCTCGTGGACCGTCCC 173938 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 173999 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 174060 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 174121 29 100.0 32 ............................. TTCTCCGGCGCCGACCAGGCCCGCACCGTCAT 174182 29 100.0 29 ............................. GGGGGCAGCCTGTTCCCGTACGCCGACGC 174240 29 86.2 33 ..C...T..C..............A.... CCGAGGACGGACGCGCGGGACTTGGTGCGGCCG G [174245] 174303 29 93.1 32 .............A.......G....... AGGTCCCGGCCGCAGTAGTCCTCGACGAGCCC 174364 29 93.1 0 ...........................TG | ========== ====== ====== ====== ============================= ================================= ================== 22 29 98.1 32 GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : GTCATCGTCCTCACCAATTGCCCGCTGGGCCTGAGGGGTTTCCTCACCCGCTGGCTGCTGGAGATCTCCCCGGGCGTCTTCCTCGGAGCCCCGTCCACCCGCATCCGTGACCTTCTGTGGACCGAGGTACGCACGTACGCCGGCCAGGGCCGTGCCCTGCTCGCCTACCAGACGGACAGCGAGCAGGGCTACGCCTTCGAAACCCACGACCACACCTGGCACCCGACCGACCACGAAGGCCTGACACTCATCCACCGCCCGACCGCCCGCGTCCCACGCGCGGAAAGCCCGGGGAGCCCGGGGAGCCCGACGGTCGATGTACCCCGCCAGGGCTGGAGCAAGGCGTCGAAGCGACGGCGGTTCGGGGGCGGGAGGTAGCCGGGGGTGCGAGGGCAGGGATGGACCGATGTCCGATAGAGGACACAAGGACGGATATGCCGGAATTCGGAGAAGTGAGTAAAAACAGGACTCCGTGTACATAGAACACCAGGTCAGCGAGT # Right flank : GCCGCAGACGGTCAGGCCCGTGTGCGTGCTCTCCGTCTCCTCAGGTGCGAGGTCGCTCTCTGGTCGGGCGGCTCCCGCTCTCCCGCTGGACGCCCAGGGGGCTCACGGCGGGAAGCCTGCGCCGGTCGTCGCCCTGCCTTCGATCGCGGTCGCCGCCGCCCGTCGCGCTGCGGTCGGCGTACGGCGGAACGGCAGAGCGCCCGGCCGCCGTACAGAGAAGGTACGGCGGCCGGGCGCTCCGGTTCACGGTTCAGGTCGGGGGAAGCGGCATCGGGGGGACAAGCCGCTTCCCCCGGTGAGAACAGGGCCTGCTGGTCCTCCGCCGCGGTCAGGGGGGATCGCGCGGCGGTGACCCCACAGAGAGGCCCTGTTCCGGGCCCTCCGGGTCCTGCCTGGTCCCGTTGGGCTCGCTCTCCATCCTGCCGGGCGGCGGGAGCCGTGTGGTCGGGCGAAAGGCCTCGATGGTGGGGACGTAGGTCCCTAAAAGACGCATCAGTGAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //