Array 1 177178-180566 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJEK01000002.1 Legionella pneumophila strain 2531STDY5467426, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 177178 28 100.0 32 ............................ TAGATAATTGTTTTGCACCTGTTGCAAGTCTA 177238 28 100.0 32 ............................ GACAGACCCAAGCTACACTGCTGGTAGAGTTT 177298 28 100.0 32 ............................ AGCTTCACAATCACTAACACACATATTGTGTA 177358 28 100.0 32 ............................ TGTAACCTTGATTCTTGACTATTAAAATCCCC 177418 28 100.0 32 ............................ ATATAAGAACAATCGAAGTTCCAAATGTGGAA 177478 28 100.0 32 ............................ CCAAATTAAGCAGCATTCTTCAATACTTTTAC 177538 28 100.0 33 ............................ CCATATGATACGCAGACAATTGCATTTTTTGCT 177599 28 100.0 32 ............................ TTTTAACAATGCGTTGTTCATTGCGTTTATTC 177659 28 100.0 32 ............................ TAGTATTGTAACTGGTCAGTTTAGGTCTAATT 177719 28 100.0 32 ............................ TTTAGAGATATGTCATTTGTTTGACCATCAGA 177779 28 100.0 32 ............................ TCCAATGAAGAAGCCTAGAGAAACAGACACAT 177839 28 100.0 32 ............................ CACACCCACAATAAACGTCATTGTCTTTGTGC 177899 28 100.0 32 ............................ ATTAGTTATTATTAATCGTGATGATTACCGAG 177959 28 100.0 32 ............................ TCTGAGTTAGAGCAACTTGAAAAACAAATACA 178019 28 100.0 32 ............................ AATAAGTAAGATTTTCCACATCCTGGGCCACC 178079 28 100.0 32 ............................ ATTAAGTCAAATAAAGTTAAGAAATTTAATTT 178139 28 100.0 32 ............................ TTATGGAACGACAGCATGTAAATGGGATACAG 178199 28 100.0 32 ............................ GCTAGTTTTCCAACTTAAACTAATTCCTACTC 178259 28 100.0 32 ............................ AGCAATGAATTTGATAGGCTAGCGGTCATTTA 178319 28 100.0 32 ............................ TATTAATAATATTTTAGAAGATTGGCACATAA 178379 28 100.0 32 ............................ ATTTAAAATCAGGGTGAACCTCAAAAGGAATC 178439 28 100.0 32 ............................ CTCATGACCTTTAGCCGTAGATATAAAAAGAT 178499 28 100.0 32 ............................ TCAACGCCCTGCGCTCAACAGGATTAACCTTG 178559 28 100.0 32 ............................ GACTCCTCAACTATCTGTTCAATTGGTTTAGG 178619 28 100.0 32 ............................ ATCAGCGAGGGAAACATCAGTTCCTCCGGTTA 178679 28 100.0 32 ............................ TATAGAGTCGAATAATACTTCTCCTCAGTTTA 178739 28 100.0 32 ............................ GTGTATATGATTTAACGCTGATTTCATGGGGT 178799 28 100.0 32 ............................ TTAATAGTTGTCTGATTATCTTATAATAAAGT 178859 28 100.0 32 ............................ AGTTTCTATCAGGTATCGGCGGGTAATCATAA 178919 28 100.0 32 ............................ TTTGGACGTTTTATCCTCCACAGTATGCCAGT 178979 28 100.0 32 ............................ TACACTCATAATTGAAAGTAGTGCAAAAATAA 179039 28 100.0 32 ............................ TATGGTGACGACTTAAACGAAGCGTTAAACGC 179099 28 100.0 32 ............................ TACATGCAAAAAGGCGGTAAAGCATGGCAATA 179159 28 100.0 32 ............................ TAAAGCCGCCGGAGCTGTCACTACGTCATTCG 179219 28 100.0 32 ............................ AATAAGATGAAAAGTTGTTGACAAAATGTACT 179279 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACTATTAATC 179339 28 100.0 32 ............................ ATCTAAAAATTGTTGAACAGTTGGAATTGGCT 179399 28 100.0 32 ............................ AACATGGACTAAAATATCAAGAGGCATAGCTT 179459 28 100.0 32 ............................ AAAGAAGAACATAGCCAGCCTACTAGCCCTTA 179519 28 100.0 32 ............................ TTAACAGTTAATCTTTCAACATCAGATAAACT 179579 28 100.0 32 ............................ GTCAGTTGTTCGATAGTTATCGATTATAAAGC 179639 28 100.0 32 ............................ TATAGGCGTGAAACAGAGCGTTTATTGCAGTG 179699 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACCATTAATT 179759 28 100.0 32 ............................ TCATAATTTGGAATTGGGGTAAAATGCTCGCC 179819 28 96.4 32 T........................... AATGTCTGATGGATCGATCATACAAAGCCCAA 179879 28 100.0 32 ............................ TAATGTGCCAACAAAATACAAGTCATTGACAA 179939 28 100.0 32 ............................ GAGATATTATCTTTGAAATCCATTTACCGCAG 179999 28 100.0 32 ............................ GTTTATTCGCCAGTCTCGCACCAGTATGTATT 180059 28 100.0 32 ............................ TTGTACAATGCCATCAGCTAATACATCTGTTT 180119 28 100.0 32 ............................ AAGATGAGACAACGCAGGCCAATAAAAATCAA 180179 28 100.0 32 ............................ ATCTTCAAAATATTCATAATCATTGGATTCAA 180239 28 100.0 32 ............................ AACATGCGCACGAATTAGCCAAGTTTGCAATA 180299 28 100.0 32 ............................ GGTAAGCCTATGTCCTCGACCAGACGGTCATC 180359 28 100.0 32 ............................ AAAAGATGAGGCTACAAAGTCATTAATCAAAA 180419 28 96.4 32 .............T.............. AAATCCCCAAAATCGCATTTGAACTGTAAATT 180479 28 100.0 32 ............................ GTAGGAATATTTATATTGTATGTTGTTGATGA 180539 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 57 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTGTAACTATTTTTTTAAGATTTATATTACA # Right flank : AAAGCACGTACGTACAGGGTCAGATCTTGCTTTTTGCCTTTATCCATAAAAGACGACAAGCTTGGAATTACCGCTTGATAATTATTTCCCAATGCATTAATTTTCTATCAAAAGGAATTAAGCAAGTCCAGGAACAGCGATGGTAAGACCTTTGCGTATTGAGTATGCTGGTGGGCTCTATCACATCACCAGTCGAGGGAATAGAAAGGAAGCGATCTATTTATCAGATGAAGACAGAGAGAATTTTTTATCTGTTTTGGGTGATGTTTGTTTAAAATATCAGTGGTTATGCCATTCGTATTGTCTGATGACAAATCATTACCATTTACTCATTGAAACTCCGCTCGGTAATCTTTCAAAAGGAATGCGCTATCTGAATGGGGTATACACTCAGAAATTTAATAAATCACACAAGCGAATTGGGCACGTCCTGCAAGGTCGCTATAAATCTATACTGGTTGAGAAAGACAGCTATTTATTGGAGTTGTCGCGTTACATAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //