Array 1 316929-317756 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACTKP010000003.1 Listeria welshimeri strain FSL W9-0516 NODE_3_length_323175_cov_89.707890, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    316929	    36	 100.0	    30	....................................	CCAGGGACCAATGCCGCCCCGATGCACGCT	
    316995	    36	 100.0	    30	....................................	GATATAGAGCTGATTCTAGGACTATTTATC	
    317061	    36	 100.0	    30	....................................	TTATATAAGGCTTTTCTAACCAACGACCTA	
    317127	    36	 100.0	    30	....................................	TAGTAAATCTAAAGAGCTGTCACCTGTGGT	
    317193	    36	 100.0	    30	....................................	GGTCAAATCATCGGTTTAGTAGGTAGCACA	
    317259	    36	 100.0	    30	....................................	TAACTATGTAACCAGTTCGCGGCCGCGGGT	
    317325	    36	 100.0	    30	....................................	AGCAACAAAAAACGTTGTGGGTAGCGCTAT	
    317391	    36	 100.0	    30	....................................	CTGCCTTTTAATATGTAGCTCAACTGGGAA	
    317457	    36	 100.0	    30	....................................	AAGAACGAGGTGATATTGCCATTTCTTCCA	
    317523	    36	 100.0	    30	....................................	CCGTCATCTTGCACAGCTTTCATATTGACA	
    317589	    36	 100.0	    30	....................................	AGAGAGGTGTCGGAATGAAACAAGAAGAGT	
    317655	    36	 100.0	    27	....................................	GAATATTCTCCCCCATCGCTAACAGGG   	
    317718	    36	  83.3	     0	............CA.....C.....T.A.......G	|                             	A,A,C [317743,317749,317752]
==========	======	======	======	====================================	==============================	==================
        13	    36	  98.7	    30	GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	                              	       

# Left flank :   GACAAATTAACCGCGACGATTAGCGAGTTGATAGGTTACGAATTATTGGAGCATGAACTGGATTTAGAAGAAGATGAAATAATGGTCATTGAATTATTCAAAGCTTTAGGAATAAAAATAGAAACAAAAAGCGATACCGTATTTGAGAAGTTAATTGAAATAGTACAAGTCTATAAATATCTATCTAAAAAGAAATTGTTAATACTTATTAACGTGTGTTCCTATCTTACAGAGGAAGAACTGCTAGAGTTGAGACGGTATATCTCTTTATATCAAGTCAAAGTACTATTTATTGAACCTAGAAAAATAAAAGGATCTTCGCAAGTTACTTTAGATTCTGATTATTTTTTACACGTAGAAAATAGTGTATAAGGTAACCGCTGTTCTTTGAAAACAAAATAAATTTTATGTAAACCATAAAATAGCATTCAAAATTGAAATCTTGCTATGGATGAATGGCGCGATTACGGAATCTTGGAGGAAAGAAAAAATTCTGCGAG
# Right flank :  GATAAAATGCATCGCAATTACAAAACATGGTTAAATTTAAAAAGGAGTTAGGTATCTATATGACTCAGTATTACTATCTTACTTCGAAGTCGCTTTTAGAAAATGATGGGGAAAAGTTTCCTCGTCTTTATATTAGACTTCTTAAATTTGAATTTTGATATGAATGTTGACCAAGACACTAATGAATTGTTTTTCTATTCAATTGATTTGAACTCAGCTTGTAAATTTCAACTTGCTGTAAGTAAAGGGAACCTGCCGCTGAAAGGTAATTGGCAAAAAAATTGTTACGAGACTTAAAATTTAAAAATCTTGTATGATTATATTCTAAATACAAGTAAAGATAATGAAACGATTGAACTATATACTGCTTGAAACAGCGAGGAGGATTTCCTGTTTTTGAATAAAACAGAACTGCTGATCTAGAATTTAACTATCGAAAATCTAATTTTAAATGACAGAGAGCTATTAATAATTAGAAATGAAAACCGATATAACTTTTA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.30,-0.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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