Array 1 309983-310217 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNMG010000001.1 Dorea longicatena strain 1001262B_160229_G10 NODE_1_length_387122_cov_44.5722, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 309983 36 100.0 30 .................................... TCCTGTTCTTTTTTATAGACTTTCTGCTGT 310049 36 100.0 31 .................................... CGCATTCCGGTTCCAACAATAGCAAAGAATG 310116 36 97.2 30 ..........T......................... TTACATTTGTGGACTCCCCATTGTAACCGT 310182 36 86.1 0 ..........T.................G...G.TT | ========== ====== ====== ====== ==================================== =============================== ================== 4 36 95.8 31 GCTTTGTACCCATGTCAAATCATAGGCTTCCAAAAC # Left flank : CGGCCAGACGTTTGGTATGTCTGGACAGTCTGAATTTGAGCAGATTTTGGATCAGTCTGCTGGATACGGATTATTTATTATGGCAATTACGCAGAAGATAGCAGATATGCCGTCTTCAATCATTGCAAACAGCGGTTTAGTATTTGCTGGAAGGCTGAAACGAACCGATGATATCAATGTAGTAGTACGGACGGTTGGACGTGAAGAGCGTATCGATGACCGTGATCTGGTCAAATGGTTTCCTCGAAGTCCTACAGGCTGGTTTGTATGCCAGACTTCTCGAACATTTGACTTTAAGGATGCAGAACCGATCCTGGTACAGATCAGCCGGTTGAATATCAACCCACCATCAAATCTGGAACTGGATGAAATCCTGATTCAGAAAGAAGCAGAACAGAAATTAAAGAGTGCGTAAAAAAGAACAGCTTCCTTAAAAAAGGAGGCTGTTTTATCATTATGAGATACGGAATAATCTGTTCTGATGTAAGTACTGAATTTAT # Right flank : TCTCAAATAACATAGATTTTGGTGAGTGGACTAACAGCCCTCACCTTTTGGCTGCAAAGTCAGCCAGTAGTTTTGCTTCTATTTATAGTATGTCAGATAGGAATATACAAAAAAGAAATACATATTAAGGTTAGTTGACGGTATGATGATAAAAATATATAATTTAGATGTAATCAATCTATTATATTGAATATAAATATATAATTATGTAGAGGAAAAAGAGATGCAAAAGAAAAATTTTTGCCCATATTGCGGAGCAAAATTAAGTAGTGAGGTTCGCTTTTGCCCACAGTGCGGTAAGAAACTGGAAGATGATAGCATAAATAATTCAGAAGAAGTTTCTCAAGAGGAATCGATTGGAGAAAATATTCCAGAGCAGCACTCATCGGAAGAAATAGTTTCGGACAATACTCCGAAAAAACAGAATGAGGGAAATGAAATTTCAGAAGAATTTCCAGATGGTTTGGATGAAAATCCATCTGGAATTAAGAAATCGAAAA # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTGTACCCATGTCAAATCATAGGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 74899-75198 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNMG010000014.1 Dorea longicatena strain 1001262B_160229_G10 NODE_14_length_83965_cov_37.8187, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 74899 36 91.7 28 ...............C.........G........C. TCTCTTTTTTCTGTGTGATATGCATTTT 74963 36 91.7 33 ........G......C.........G.......... TGAAAAGTAAACCATAATAATAATAATATATAT 75032 36 94.4 29 .........................G....A..... AGTAAGCATGCCTCCAACATTTCTTTTGT 75097 36 100.0 30 .................................... AGAAAAGAAGGAATACTACTATTGGAAAAA 75163 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================= ================== 5 36 95.6 30 GCTTTGTACCTATGTTAAATCATAGACTTCCAAAAC # Left flank : CAGATCACCTTCCGCATTGCTGTAATAAATAATCTTTTCTCTTTCAGGAACGTTGTTCCTGTCATGTAGGTAAAAACGCATATCAATTGCTCCTTTTGTGTAATAATATTGAACATTACAGTATTTTTTAACCTCCATTCTTCTGCATCTTTATGTCCTGTAGATAGAATGAAATATTCTCTGTAAAACAAACTGCCGGTATGGAGGTGAAATCATAAACGAGATTGTATTCTACAAAAAATGGACATTATCTTACGTTACAGAAGTGCACCGGCAGACGTAAAAGGCCAGATACAGAAAACATTCCGGGAAGAGACTGAAAGGCAGACAGAGAAAGAAAAAGCATCCAATTTAATTGATATTATTTTTTTTAAATCGCAAAATCAATTTGATATATCAATTTTCAAAAAAAGAAGCCATAAATTACGGCTTCTTTAAAAATTTATATCAAATCTTAAGCTTTTCAAACATGTACGTTCTTCTTTCGATTGCTGTTTAAT # Right flank : CCTCAAATAACATAGATTTTGGTGAGTGGACTAACGGCCCTCACCTTTCGGCTGCAAAGTCAGCCGGGCAAGTAAAATTACTCAAGTTTCATTTTTTTCATCATATCAAATATATCACGATATGCATCCATTTTTCCAGCGTATCGTGCTTCGGAATACTTATCTTTATTTTCTGCCGCACTCAGATACATACTCTCATTATGAGCCTTCTGATCCGCCAGGTAATTAAGCATCTCATCAACTTTAAAAGCAACCGGCTGTTCCTTGATTAATTTTTCAACCTGTACAAATCCTTCTGCTAAATTATCAGGTACAATATCGTGTTTTTCATCATATCTTCCACTTATCTTAGATAATAACAAGTTTCTTTCTATTAATTCTTTTTCCATATTTTTACTCCATATATGGTTGTTTTTCCTATGCCTTAATGCTTTGTACCCATACTAAATTATTGGCTTCTCAAACCTCAGAAATCCTGGTTAAAGCTTTGTACCTATGTC # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTGTACCTATGTTAAATCATAGACTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //