Array 1 1-291 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JATW01000031.1 Streptococcus equi subsp. zooepidemicus Sz16 contig000018, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence           	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	==========================	========================================	==================
         1	    26	 100.0	    40	..........................	TTTTGCCATTTCGCTTACCCAAGCCACTTTGTCAGTCTCG	
        67	    26	 100.0	    40	..........................	TTTTGCCATTTCGCTTACCCAAGCCACTTTGTCAGTCTCG	
       133	    26	 100.0	    40	..........................	GTAACCCGCCCTTGCTCTGTTACTTAAATGATTTGTCTCG	
       199	    26	 100.0	    40	..........................	TTTTGATAAACCAAATGATAACGTTTTGCACCAAGTCTCG	
       265	    26	  80.8	     0	..TTTC.T..................	|                                       	T [283]
==========	======	======	======	==========================	========================================	==================
         5	    26	  96.2	    40	CCCCATACGGGCGAGTGGATTGAAAT	                                        	       

# Left flank :   |
# Right flank :  TGCGATACGTGACTTTACGATGTTGCGACTCCGTCTCGCCCTTTGTGGGTGCGTGGTCCGTATTCTTTGTTTTTCATGAAGGGATAAATTATATCGTATTCATCAAGCTGATTTAAGCTTTTTATGGTGCTATGTCAAATAGATAAAAACCAATCTGAGGTTGTTGCAACAGGATTGGTTTTTTCTTGTGATTGCAGATCAGACTTTTCAAAAGAACAAGCACATTATCTCAGCTAGACTGGTGCTTGATAGCTCCTGAGCCCTTGTTTGCTGTAGTTGATAGGATTTTGCTGATGGCCTAGTCAGGCATATCGTATCAAATTCAAGTTTTTTCATGTCACTGTCTATAGTTTGTCTGCCCTACTTTAGGTAGAATAGAGGTAACTTAAGAGAGGAGTTTATTATGGAATTAACGATGCTTTTGATGGTTTCAGTTTTCATTGCAGGGCTGTTATCATTCTTTTCCCCTTGTATCTTTCCAGTTCTGCCGGTGTATTTAG

# Questionable array : NO	 Score: 8.66
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCCCATACGGGCGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [7,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CCCCATACGGGCGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.20,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.41,0   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//