Array 1 608661-609543 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR733824.1 Pseudomonas sp. 8Z isolate Pseudomonas sp. 8Z, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 608661 29 100.0 32 ............................. CGCAGCCAGTGGTCAGGTTCTAACTGGTCGAC 608722 29 100.0 32 ............................. TCAATAAGCTGCTGAGCCTCGCCGGTAATGTT 608783 29 100.0 33 ............................. TGCTCAGCCGCCTCAAGCGCGACTTCGACTTCC 608845 29 100.0 32 ............................. GCTGACTTTCGGAGCCTCTGGCTCAGTGGACA 608906 29 100.0 32 ............................. AAATGCAGTCGCTGTACACTGATGGGAAGCAC 608967 29 100.0 32 ............................. TAGGCCCGACATCTACCGGATCCGCTGGCCTT 609028 29 100.0 32 ............................. TCACCCATTCCGAGCGTGGCAGGCATTAGCAG 609089 29 100.0 32 ............................. CAGATGATCGAAATACGCTTTACATATAGGGC 609150 29 100.0 32 ............................. TGTGGAACGCCTGCAAAGGCCTCGATGTGCTG 609211 29 100.0 32 ............................. CCATGGTTTTTGAGGCTTGGTGGCAGGATGTT 609272 29 100.0 32 ............................. TACGGGGCAAAAACCTAGTTGCGCCACTAATG 609333 29 100.0 32 ............................. GGCGTGCTGGGCCAGACCATGACCGCCGACGA 609394 29 100.0 32 ............................. TCCTGCGCGGCCAGCTCGATAGCGGCGCTGAA 609455 28 93.1 32 ...........-T................ CCTTCGCGCAGATCGTGCTTCAGGTACTTGAA 609515 29 93.1 0 ........................G.G.. | ========== ====== ====== ====== ============================= ================================= ================== 15 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATGAACCG # Left flank : AGGAAACCATCATGCCGCGCCTGTACCGCGAGGCACCGGTCAACTCCATCTGGGAAGGCTCCGGCAACGTGCAATGCCTGGACGTGCTGCGCGCCCTGTCCAAGGAGCCAGGTGTGCTCGATGCACTGTTCGATGAGTTGGGCGATGGTCACGGCGATGCCCGCCTCAAGGCACATATCCAGCGCCTGAAGGCCGATTTTGCCGATACCGCCGACATCCAGTACCGCGCCCGCCAACTCACCGAGGACATGGCCGTGGCCCTGCAGGCCAAGTTGCTGCTGGAGGCGGGCAACAGCGTGGTCAGCGATGCCTTTATCGCCAGCCGCCTGGAGGGCCGTGGCCGGGTCTACGGCACCCTGCCGCGTGGGGTCGACGTCGAGGCGTTACTGGCGCGCAGCACGCCGAATCTGTTTTGATGCCAGAGCGATCTTTAACAAGGAAAAGTTGGTAGATTTTTAGCGGCTGATTTTTCCCTTTGGGGACAATCGGTTACGCTAAGT # Right flank : GCAATGGCAAATTCAAGGAGTCGCTCGAAGTGAGGCCTTGTAGCGGCTGTCGGCGCGGCCTTTGTGGGGGGCTTGCTCCTAGCGACTGTTGAGCACGCTGCGGTGCTCGTTGAATTGTGGTCGAGGGATGCTTCTGCGCTGGTGAGTGTGATCGTGCAGTTGTCAGGCATGTGCCTCGCGATCCAGCACGTCCACCACCCATTGATTGATACTTTTGTGAGCCAATTCGGCTTTCACGGCGACCGACGCATGAAGCGCGGGCTCCAGGCGCAGGCTGAGTTTGCCGGAGTAGGGTTTTTGTGGCGAGCGCTCTAGTTTGGCGCAGGTTTCGAGGTAATCGTCGACAGCTTCTTCAAAGGCACCGCGAAGTTCTTTTACCGACTCACCATGGAAACCCACTACATCGCGAATCCCTGCGATATGGCCAATGAAGAGACCATCTTCATCGCTGTATTCGATGCGAGCGGCATAACCTTTGTAATTCATTGCGTTCATGGGGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 620695-622004 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR733824.1 Pseudomonas sp. 8Z isolate Pseudomonas sp. 8Z, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 620695 29 100.0 32 ............................. TCCGCCAGTCTAAAACCCACATGGCCCGACTG 620756 29 100.0 32 ............................. TTCATGCTCACAATCATGTATGAGGAAATTTT 620817 29 100.0 32 ............................. AGATTGCTCAGAAGTGGGCGCGCAATAAGGCG 620878 29 100.0 32 ............................. CCCATATGTAGCTACCGCGCTCTGGAACCTTC 620939 29 100.0 32 ............................. TCTACGGGTGATAATTGCGGTGCTGATAGCTA 621000 29 100.0 32 ............................. CAACGCCCCTCCCCTTGGAGCTGCTGCTGGTG 621061 29 100.0 32 ............................. GCAAGATCATTGTCGAGTGCTACGGCAAATCG 621122 29 100.0 32 ............................. CTCGAAATGTGGCGCGGCGCGGGCATGGACGG 621183 29 100.0 32 ............................. TCAGGGAACTTGGCCCAGGCGTCGAGCTGTGC 621244 29 100.0 32 ............................. TTGGGATAGTGCTCCAGGACGTAGCAGACAGC 621305 29 100.0 32 ............................. CCAGAGAATTGACTCCGGCTCTTGCTGGTACG 621366 29 100.0 32 ............................. CCATCCGTACCGGCCTTAGCCGCGAACAGACA 621427 29 100.0 32 ............................. AAAACGGCGATTTGATCCGCGCAGGCGGTGAG 621488 29 100.0 32 ............................. CCGGTGAGGATGTTGGATGCGATGTCTGCGGT 621549 29 100.0 32 ............................. TTCGATAAGGACAATCGCCAGCACCAGCAGCA 621610 29 100.0 32 ............................. CAAAGGCCGTGGTTTTCTCAAACTTAGGCAAT 621671 29 100.0 32 ............................. GCACGCAAGCGCAGCGTACTGCGGCTGCCGAG 621732 29 100.0 32 ............................. TTCGCTTCTATAAAGTCAGCAGTCTGCCGGGC 621793 29 100.0 32 ............................. TCCGCAGTCGGTCATCATGTCAAAGTTAAGCT 621854 29 100.0 32 ............................. AAGCTGAAAGCACTTGGCTTTGAAATGGCCAA 621915 29 100.0 32 ............................. GGGGCGAAAGTAGCACGCCGCGTACTCTCCAC 621976 29 93.1 0 ...................C........A | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATGAACCG # Left flank : CGGCAAGATCATCCCCATCATCGAAGAGGTGCTGTCGGCAGGCGGGATCTCGCCGCCCGAGGCGCCGCCGGAGTCCGTGCCACCGGCGATCCCCAACCCGGAAAGCATCGGCGATGCCGGGCACAGGGCGCAGTAATGAGCTTTCTGGTCGTGGTCACCGAGAACGTCCCGCCACGCCTGCGTGGGCGCATGGCCATCTGGCTGCTGGAAGTACGGGCTGGTGTCTATATCGGTGATGTCTCCAGGCGTACCCGTGAAATGATCTGGGAGCACCTGAGCAAGGGGCATGAAGATGGCAACGTAGTGATGGCCTGGGCGAGCAACCATGAGTCGGGGTATGAGTTCCAGACGCTTGGGCCAAACCGCCGCCTCCCGGTGGAGTTCGACGGCCTGCATTTGGTCGCTTTTTACCCTCCTGAAACACCCGATCTTTAACAAGGAAAGTTGGTAGATTTTTAGCTGCTGATTTTTTCTTTTGGGAACAATTGGTTACGCTAAGG # Right flank : AAGCTTGCCGCCCAGACGTGCTGTTTTTTCCCTGGTCAGGCGCGTAATCTGGCGCGCGATGGTTCTGCGTGCACGTACGTGACGCGGATGAAAAGGGAACAGGGTGCGGCGAATTCCGCCAATGCCCTGGCTGCCCCCGCAACTGTAAGCGGCGAACGATGCCCCTATGCCACTGACTTTGGTTGGGAAGGTGGGCGAAGTGCCAAGCCGTGAGCCAGGAGACCTGCCATCGACAACGGGCGTTGTGCCCACCCTCCATCCGAATCGTCGCGCGGTGGGCGCGGCCAAGGAACTTGCATGCATATCGAACCGGGTGTCGTTGAAGGCGCCAAGATCTTTCTCAGCTACGCAACGGCAGTCGGCGCCTTTGGCCTGACGGCCAAACTGGCGCGTGATGCCATTCGTGACAACGGCGGGGTAAGCGCTCTGGCGCTGCGCAGCTTGCTGACCTCGGCGCTGGTGTTCTGCTTTTTCGAGGTATTGCCGCACCATGCGGTGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //