Array 1 819486-819753 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUFT01000005.1 Vibrio palustris strain CECT 9027T, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 819486 28 100.0 32 ............................ GCCAAGTAAGTCAGAATAGCAATTGACGTAAA 819546 28 100.0 32 ............................ AAAACACCCTGCCGTATCCGCTCGACGTGTCG 819606 28 100.0 32 ............................ AGCGCGTAAACTTTTTTAAAAAATAATTTGAC 819666 28 100.0 32 ............................ ATAGGTTCTTACCTATCCAATATCGCGCCATG 819726 28 92.9 0 .............T...T.......... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 98.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ACACCATCCAAGATGTACTTGGCGGCGTGCGTTCAACCTGCACCTACGTTGGCGCCGAGCACTTAAAAGAGCTTACCAAACGCACCACCTTCATCCGTGTACAAGAGCAAGAAAACAACGTGTACGGCAAAGAATAGCTCAACTGAGCCTCGTAATATGAAAATCATCAAAAGCCGCTTTTAGCGGCTTTTTTACATCACAAATGTCAGTGTCGTCTACTGACGTAGTTGAGATTCAAAGTTAACTGTGACGACTTTAGTGCTGAAGCTTACCTTTTTACTCCCCACGTAAGGGGGAGAACCTCTTAGCGCTCGCCTTGAATCCACTTCCCATCCCCGCTTTGTTGTTATAACGGCGAATCACGCGACAGACCCTTTATTTTTATCTATGTATAAAAATCAATAAAAACAGTTACTTAAAAATTATCTCAAAAAAAGGGTCAAACTAGGGTTTTACTGTTAAGCGATTGGTATTAGACATTTTTGTGCTATATTATTCTA # Right flank : AGATTTCGTAATGCTAGATGAAGCGCCCATGATCGGGCGCTTTTTACGTCTAATGAGAAGCTAATAAGTTGTAAAGTACGGCGAGGAGGTTTCTTATTTATCATGCCACGTAATTGAGCTTATCACTCACGGAATCCATTATTAAGGAGGTGATTGGGTAGTGTGGATAAATCGCTAAATAGTTTGTTTATTGAACAGAGTAATTTTGACTAACGGTGAGTTGTAGCGAAGTAAATAAAATCAGCTGAATCACTACCGATTTCTTAGGCATCTTTTAGTTAGATAGAATAGACAGGTGTTGATGAGCCGCAGCTAAGCATGGATTCTCAAACAAAAATAATGTGGTTTACGGTTGTATTTTATGCGTTGGTGACAGTCATTGGCGGAAAGATATTCATAAAAAAGCCATACCGAAGTATGGCTTTATAGGTATATGAAGCAAGCGAGATAATTACAGGTTCGCCATCATATCGTTGATGCGATCTTGTGCCGATTGCAGA # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 798568-798181 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUFT01000002.1 Vibrio palustris strain CECT 9027T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 798567 28 100.0 32 ............................ ACATTTGCAGCGGCTTGCATAGTCGCCCCATT 798507 28 100.0 32 ............................ TTGAATTCAGAAATAGTTAGGCGTTTGTATTT 798447 28 100.0 32 ............................ TTCAAAAGCATTTCGTAAAGTTCTTGGCCTTT 798387 28 100.0 32 ............................ GTCAGTTGTTGCAATTGTTGTGTTTAGTAGTG 798327 28 92.9 33 .................TG......... ATCCAACGCCCAGAAACATCGTATTACTAAAAA 798266 28 92.9 32 ......C...........G......... GTCACATCTTCCACATAGGTTTTCGTGATGTT 798206 26 82.1 0 ......C...........T.-.G.-... | ========== ====== ====== ====== ============================ ================================= ================== 7 28 95.4 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTTAAACAATTCGACTCTGACTATCATGTAAATGATGATATTACGGTTGTTCTTCGGTCGGAAAGTGGCAAAGAGATAAAATGCCCACCCATGCCTAGAAAAGCCTTCAATCGCGCCGAAGTGCTTAGCTATATTGGTATGTTGAGTGATGCTCAGCAGTTTGATATCGCTAGCTTGAAGAGTCGTCAATTCGGTGAAGACCTTCTTAAAGTCTCAAAAAGTAAAGAGCAGTTACTTGTAATTCCGTGTACTGATCAAGAGTTTGAATCGTTAAATGAGCTTGGCTGAACCACGAAATAAATGGTGCGCGTTGGGGTGACGCTTGCGCATCAATATAGTATTTAGGGTTTGCCCTTGAATCAGTCGGCAGACCCTTTATTTTTACCATTGTTCATGTATCAATAAAAACAATGACTTAGGAATAAGCTCAAAAAAAGGGGTAAAAAGGGTTTTTCTGTCTAATCCTTTGCTATTACGTATCTTTTTGTTATATTTTTCTA # Right flank : GAAGAGGGGCTAGGGGAGTTCTTTTGGGAGAGGAAGTGGCTGTTCAAGAGGTTTTTCAGGTGCTTAAAACGGTGAAACCCCGATGTTGGTAGCATCGGGGTTTCGAATTTTCTGTGATAGTCAGTTGGTAAGACTGAGCATCAACTATATGCAAAAGGACTGGAAATAATCCGACAATTCCTGGTAAGGGAATTAAACGCGGATGAAGTCCATGTGTTCAACTTTTGGCTTGAACGCGTGACGTTGAACGTCTTGAGGCTTAACCTTAACTTCTGCGCCGTCAATCACTAGAGTGATTGTTTCGTAGAATTCAGGTTTGTCCATTTGGTTAAGAACGTCATCGTGGTTCAAAAAGATTGCTACTGGAGCTGCTTCACCACCGTAAACGATAGCAGGGAAGTTGCCAGCAAGACGTAGGCGGCGGCTCGCACCTTTACCTAGTTCAGTACGTACTACTGCTTCAAATTTCATAGTATTTACTCTCAAAATAGTAAAAAAAC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.10,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 807000-806551 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUFT01000002.1 Vibrio palustris strain CECT 9027T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 806999 28 100.0 32 ............................ GCAAAATCACACTATCAACATCAGCGGCGGGA 806939 28 100.0 32 ............................ GATTCGTTGCCGGATATAATGATAGCTTCTAT 806879 28 100.0 32 ............................ TTGATGATTTCGCCCGTCTCCATCGCGTTAAA 806819 28 100.0 32 ............................ AGTTAAGTCTTGCAGGTTGCTTTTTTGACGTT 806759 28 100.0 32 ............................ TGCTTGTTTCAATAGTTCGTTAAGTGTTGGCA 806699 28 100.0 32 ............................ GCGGACGTGTACTGCGCTTTCTGTGTTGAATA 806639 28 96.4 32 ...........T................ GTTATCTCTGAGTAATTCTTGATTTCTTGATT 806579 28 100.0 0 ............................ | T [806553] ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.5 32 GTTCACCGCCGCACAGGCGGCTTAGAAA # Left flank : AGAGCAATTAGAACACCAGCCGTGGCGTAAAGGGCTGAGTGATTTTACTCAAGTGTCGGATATTTTACCGGTACCTGAGACGCAAGAGCATTGGTTGGTGCAGCGTGTACACGTACAAAGTAACCCAGAGCGGTTACGTCGCCGTGCGATGAAGCGCCATGGTTTGAGCTACGAGCAGGCCGTTGCGCGCATTCCGGACAGTGTGGTGGAACACTCCGATTTGCCCTTTGTGCGGATTAAAAGCCAATCGACGGGAGGGCGACAATTTCCACTATTTATTAAACAGACGATGGTATCCGCGCCAAACATAGCCGAGATAAACTTTTCTAAATATGGTTTAAGCGCAACGACAGCGGTTCCTAAGTTTTAACCCTTTTTTTTCTGACCACTCACCAAGCCCGCTGTGACGGGCTTGGTGATAACTGGCGAAAAAAAGGGTATTTTACCATGAACTACCTAAAGCTCTTTAAAAATCATAAAGATAGTGCTAGTTTCATCTA # Right flank : CTGACAGTTTCGTGGTTGCGAGGCTGTTAGAAGGATTATGGTATCTGCTGTCTTTAGATGTCTGAATTTACTCAGATATGTCGGTTTATTATGTATATTGATGCACTGGGTCTAAAAACGCCGTTCAGGCTCTTTTTATTTCAATTCAATCGATTACTATGGTTGAGCAGCGTTGATAGTAAGGATTGCTCATGCGAAGAAAAACTAATCAGGATTTTGAATCACTCCAAGAGGCACTTAAGACGACCCCGACCAAAACTTGGCAAACCTATAACTGCACGCTTGTTACACCCATGTATGGTGGTGGCGTGAAGGCTGGCGAAGTGGATAAGGACATGCCGATTCGCGCTAGCTCGATTCGCGGACAGCTGCGCTTTTGGTGGCGGATTGCTTGTGGCCCATTTAATAGCCCTAAAGAAATGTTTGATAGAGAAACCGCGATTTGGGGCGGGATTGGTGATGATGGAGCGACTGTTAGTCAGGTGGAGATTCGGGTATCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGCACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 808323-808175 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUFT01000002.1 Vibrio palustris strain CECT 9027T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 808322 28 100.0 32 ............................ ATTGCGTTACCTGATACCATTGCGTTACCTGA 808262 28 100.0 32 ............................ AGCAATTCGGCATCAGAAATTTCAGCATTAAC 808202 28 92.9 0 .........................T.G | ========== ====== ====== ====== ============================ ================================ ================== 3 28 97.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AATGCACGGTAGGTATTATTCCCAATGCCCCAAACCCAAGTCAGTAGAAAAGCACCCCAATTCCAGCCTTGTATCTCGCTCGGAATATCCGCATGCTTGCCTTGACCCGATGTATTATTCTCCATTATAAGCCTCATTTTTATTGTCGTATTATCAGTTTTATTCGCCAACCACGTATTAATGGTTTTGAAGCGCAAATTATAGCGGTAAGTCTCAGGAGTTTTAATCAAAGGGCGATGTTTTATTAGTTGTTTAGATACAGGTCTAAAACTGCATAGTGGGTAGTTGAACGAGATAACTCGCAGGGCTGCGGACAGATAGTGCCGCCCGAAAGTAGGGCTTTGCATTAACCCTTTTATTTTATCGATAGACCCTTTATTTTTGGTGTTATAAAAAATCATTTAAAAACAAGTGGTTAAAAACGAGCAAAATAAAAGGGTAAAAAAGGGTTTTTCTTGTCAATCTCTTGCTATCACTTCGCTTTTTGTTATATGTTTCTA # Right flank : TAAATATTATTCCATGCGCTGCATATTATTTTTTTCACGAAAAGGTGATACAACTAGAAAATATACCTGCGGTATTTTGTTATCGTTAGTTTGATTAATGGTATTTTAAACAGTGTGTTGGAAGGTGTGATTGGTTGGCGAACCCTCATCGCAAGAGTTGGTGCTTGACGGTAATTCGAAAAAAAGCAAAGTGCTGTATGACGTGGATGGTACCGCAGCCTTGCACTCGCAAAAAATTGGCAATGCGATCCGCACTGTGGATACGTGGTACCAAGGCGCGGAAGAGGTTGGGCCTATCTCGGCTGAACCGTTTGGATCTGTCACTAGCCGTGGTAAAGCTTACCGCAGTAACAAAGACGACTTTTATACACTGTTTGATAAATGGATGGAAAAAGGCCAAGCCCCTGATGTTGAACAACAACATTATGTGATTGCCAACCTCATTCGCGGTGGTGTCTTTGGCAGTAAATCGGAGTAGACCATGGATTATTATCAAGACA # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //