Array 1 520551-521017 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJIG01000003.1 Anaerostipes sp. 992a contig000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 520551 35 100.0 37 ................................... TTAGTTGCAAATTGCTTTTCGCCATGTTTTGGTTTTA 520623 35 100.0 38 ................................... GTTCCCACTCAGCTCCGCAGTAAGGGCATGCCATATCA 520696 35 100.0 38 ................................... TCACAACAGGATGTTCTTTCGCCCATTCTTCCAACGCG 520769 35 100.0 38 ................................... ACCTCATAACTTTTCGCACCTTTTACGGCATCCCATTG 520842 35 100.0 36 ................................... TTTTTGATAATTCTTCTCTAGTATACATTTTTATGG 520913 35 100.0 35 ................................... GCAAGTGTATCCTAGTTTTGTATTCCTCTTAACCG 520983 35 88.6 0 .......................A........TTT | ========== ====== ====== ====== =================================== ====================================== ================== 7 35 98.4 37 TTAAGAAATAAGATTCCCCGTAAGGGGACGGAAAC # Left flank : GGATAGAAGTAAAACAAAGGTAACTTTTTCTTATCCGCAAAGTCCAGTCATTTATCTGGCAGGCTTTTATCGCAGGTTTGAGGAGGAAGAGCGGTTTATAATTCTAACAACCGATGCCAATGCTTCTATGAAGCCAGTGCATGACAGGATGCCGTTGATCTTTCAGAGGGAACAGATCAAAGACTGGATCTGCAATGATAAGATGGTGAGAAATTATCTGAAGATGGCATCGCCAATGTTAGAACGGCAGCAGGAGTATGAGCAGTTGACATTGTTTTAGGAAGGTTCGGTATGAAAAAATAACTATAGTAATGTAGGAAAGAATATGCTAGAATAGGAGAAGAAAAAGATCAATAAAAATAATTCTAAATCAGATTTATTAAGTATGTTTGAAGTCAAAATAGGATTTGCGTCTAATAATCAATTTTTTCTTAAAAATTGATTATTAGACGCAAACCAGTCTGAAAGTTCCCATAAATAAAGGATTTGTAAAGAAAGGA # Right flank : TGAGTAAAAGGATAGTAATGTATTAGTATATCACTATCCTTTTTTGTCAATTTATGGTATAATTATAAGGACAATTCTTGCAATATATGGGAAAATATTGAAAAAATATATTGACAATTACAAAAGAATAAGATATTCTATAATATTCTAAAATTGGAGGGGAGAAATATGAAGAGAGTTTTATTTTCACCGATAGGAGGAACCGACCCTATCTCAAACGACCGTGATGGAGCAATGCTACATATCTGTAGAAAATATAAACCAGATTATGTGTATTTGTATTTATCGAAAGAAATGATTGAATTTCACCAGAGAGATAATCGATATTTATATTGTCTTGAACAGCTGGGAAAAAAGTTGGATCATCATTTTGAAGTAGAATTAATTGAACGGAATGATATGAAAGAAGTTCAGATTTTCGATTCTTTCATCAATGAGTATCGTGATATTTTGAATTATATTGTGAAGAAGCATCCAGAATGTGAATATTATTTAAATGT # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTAAGAAATAAGATTCCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 528895-529641 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJIG01000003.1 Anaerostipes sp. 992a contig000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ====================================================== ================== 528895 23 100.0 47 ....................... CATCATTGCTTTAAGTTCTTTTGCGTTTATTGTAGTTTATTAGATTA 528965 23 100.0 54 ....................... TAAAGTCGCATACCAAACCCTTTGTTTACGGCAAACCTCTTGTTTATTAGATTA 529042 23 100.0 48 ....................... TCTAACCTTATTTTTTTGTTAATTGGTAAAAGCTAGTTTATTAGATTA 529113 23 100.0 50 ....................... GCCATTCTAGGATGGCTGTCCTCACACATTCTTTGCAGTTTATTAGATTA 529186 23 100.0 48 ....................... TATTTTTTGTCAGCCTTATTACGTCTGTACTTTTGGTTTATTAGATTA 529257 23 100.0 48 ....................... TGATATGTCCAAACGCTGGACATCTTAATCGCGTAGTTTATTAGATTA 529328 23 100.0 50 ....................... TCTTTCAATGTCATAGCATTTGCCGTTGTCATCATTGGTTTATTAGATTA 529401 23 100.0 49 ....................... TGTGTTGAGCATAACAAAAAGGTTGGTGAAGAGAAGGTTTATTAGATTA 529473 23 100.0 51 ....................... ACGAAAACATTCGTTCCATAACGCATTGAACGCACGTGGTTTATTAGATTA 529547 23 100.0 49 ....................... GCTTTTGTCTCCTCGTTTCTACTGTATACCCTTCCTGTTTATTAGATTA 529619 23 73.9 0 ...............G..TTTTA | ========== ====== ====== ====== ======================= ====================================================== ================== 11 23 97.6 50 GATCCCCGAAAGGGGACGGAAAC # Left flank : AATAGATACATCTGTATGTAACTATTCTGAACAGGATATTCTTAATGCAATTAGTCGGGTATATGAAAGAAATTCTGCATTTTATAAAAAATTTGGTAACATTAATGATTCTGGAAATCATATGTTATATCTTGGAGGAGGTTGTGGATTTGTTACAAAAACAATTCAGTATTGCTTATATCCTGAAAAACGAGCAGTACAGATTAATGCAAATATTATGACGAAATTAACTCCTAGAAATCATGGACATGGAAAGGATATAAAATACCGTGTTTCTCCGCATGTGAAGAAATTGACCAGGTATTCTGGCAGAGAATATGAATTTGGGTTATGTGAGATGAATATTTCTAAAATGTAATCTATAAAAAGCATATGCTATAAGTTATGCGGCTGACTCATGAAAAAGGAATGCAAAACATGGGAAAACATCTTGTTGCACGCAACCCCTTTTATTATAGCTCATAAATTAAGGGGTTGCGGATCAGGGGTTTATTAGATTA # Right flank : ATAGGATAGCATGTTGACGATGGGAGGGATTCAATGAGTTATTTGTATGTAATGGAGCATGGGGCAACGATTCAAATTTTGGGAGGGTATTTTGTTGTCAAGTATAAGAATGGGATGGAGAAGAGGATTCCGAAAGAAACTCTGGAGGCCATTTCACTGTTTGGGAATATTTCCTTGTCTATCAATGTGATTGAAGAATGCTTAAGAAGAGGAATACCAGTTAATTATTATTCAAAAAGAGGAGCTTACTATGGAAGGCTGGAATCAACCAGACATGTTAATATTTTTCGCCAGAAAAAACAATTAGTTTTGTCTGATGATGACAAATTTTCTTTGGAGTTATCAAAAAGAATGATTCAGGCAAAGATACATAATCAAAAGGTAATTTTAAGAAGATATACAAAAAATACCAGTTCTAATACCAGTGATTGTATCAAAAGCCTCAATATTGCTGAATCCAAGGTAAAAGATGCAAAAAGTACTGATAAATTGATGGGATA # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.16, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCCCCGAAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched AATCCCCGAAAGGGGACGGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.10,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 143928-137199 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJIG01000001.1 Anaerostipes sp. 992a contig000001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 143927 32 100.0 33 ................................ TGTGATTTTCCCATCACTCTGATCAGTGATAAT 143862 32 100.0 34 ................................ ATGATATCGATGGAATATTAGATGTTACAAATGT 143796 32 100.0 33 ................................ AAAACAGAAATGACATTGTTGGAAGCTATTGAA 143731 32 100.0 34 ................................ TTGACCATGACTTGATCTGATTTGCATTTTTCTT 143665 32 100.0 35 ................................ GTGAAGGAACAGAATGTATAAGTGATGTCAGTTAT 143598 32 100.0 34 ................................ GCTATGTATCTGTATCATTCTATCAGAATAATAT 143532 32 100.0 34 ................................ GAAATATACAGCAGAAAAGGTTTCTTATTTTGAC 143466 32 100.0 33 ................................ AATAATGCAGCTCTATTAGAAAATATATACAAT 143401 32 100.0 34 ................................ TGGGTAACATCAGAGGTCCTTCCAGCTATAAGGA 143335 32 100.0 33 ................................ GATAAAAATCATGAACGCAATTAAACAAGACAT 143270 32 100.0 34 ................................ GTTCGTAAGACCAGCATTGGATGCTCAAAAAGAT 143204 32 100.0 33 ................................ AAAGCTGGAGAGTTCATTTTGCCGGACAACAAA 143139 32 100.0 33 ................................ AGAAATACTTGAGAAACCAGTAAAGATTTTAGG 143074 32 100.0 35 ................................ AGAATAGGTTTTGAAGATGGTGGTGGATTTAAAAT 143007 32 100.0 34 ................................ AGAAATGTGTTTCTGATGGTGATTTTCAGAAGAC 142941 32 100.0 34 ................................ TATATTTACATTTTTGTATTATAAAACTATTGAC 142875 32 100.0 35 ................................ AGATAATCAGTCCTGTATCCGACAACCTTATCAAT 142808 32 100.0 34 ................................ CAAAGTAATCAAATTCTTTCATGACTTAGAAGAT 142742 32 100.0 35 ................................ TAACAAGATTTAATATTTTATCTTTAATCATTTCC 142675 32 100.0 35 ................................ GATGATTCTATTCAAATAAACGAACAAATAATAAA 142608 32 100.0 35 ................................ TTGAATATTCCGAAGCATATATTCATAGATTTCAT 142541 32 100.0 34 ................................ TGAGGTTAGTTGATGGACCGAATGTTAACTAATT 142475 32 100.0 34 ................................ AAAGAACATCCCGTTTTAACTGCAGAAGGATGGA 142409 32 100.0 34 ................................ CAAATACTGTAAAAGCACAGCAGGAAGAACAGGC 142343 32 100.0 36 ................................ AGTGTTTTCGGTTGTGGGGAATGTGTTGGAAATTAT 142275 32 100.0 35 ................................ ATTGTTTGTAGATAGAGATATGGTTATTTTGAAGA 142208 32 100.0 36 ................................ AGTGTTTTCGGTTGTGGGGAATGTGTTGGAAATTAT 142140 32 100.0 35 ................................ ATTGTTTGTAGATAGAGATATGGTTATTTTGAAGA 142073 32 100.0 33 ................................ CTCTTTTTAGTTTGGAGGTATCAAAATGGCAAC 142008 32 100.0 35 ................................ CGGATAAGCATTGTATGTTCCGTCGTAGTTAAAAG 141941 32 100.0 36 ................................ AGTGACAGAGGACGGTGGAAACCTGTCGCTAATCAA 141873 32 100.0 35 ................................ TACCAGAGCATGACACTTCAAAGTTTGACCATGTT 141806 32 100.0 36 ................................ GTTTGCTGTTTTTGTGTATAATGTATATGCCATTTA 141738 32 100.0 34 ................................ ATTATCTTCACGATAAGCCAACCATTGAAGAATC 141672 32 100.0 34 ................................ GTGTGGAGGTGATTCCGTTGGACAGAAAAAGGTT 141606 32 96.9 34 ..........................A..... AGAAAAAGGAAGTGAGAATATGAAAACAAGGAAT 141540 32 100.0 34 ................................ ATCTTCATTTTTTTGAATATTCACAGGCAGATAA 141474 32 100.0 36 ................................ ATTTTTTTATTCGTTTCTGTTGTTGACCTCATCGAT 141406 32 100.0 35 ................................ ATCTCAACGGCTTGATTTCTCATCTTTTCTGTGTT 141339 32 100.0 34 ................................ TGGTTTTTAAATGGAGCGAAAATCAGATTAAATT 141273 32 100.0 35 ................................ CAAAGAAGAGTAAGAAGGTATATTGATTTTGTCAA 141206 32 100.0 35 ................................ GGTATACAGAATGAATGTTCTATATCCGAATAGGA 141139 32 100.0 34 ................................ AGAAACTTAGAGCCGGTTCTATCGCTTGTGAGAA 141073 32 100.0 33 ................................ TATAATGTAGATACAAGGTAAGGAAAGAACAAT 141008 32 100.0 34 ................................ AATAATGAACGTCTGTTTCGGGGTCTTCAAAATC 140942 32 100.0 34 ................................ GCGTCGTATTTTCCTTTTGCAATTTTTTGAAAAT 140876 32 100.0 34 ................................ CGGTCCAGAAATTAACCAACTTCGCTCCATCCAT 140810 32 100.0 34 ................................ CTGGTCCGGATTTCTTGAGTATGATTTTTATGCT 140744 32 100.0 34 ................................ GGAGATGGAGGAATATTTTGAACAGCAGAAAGCA 140678 32 100.0 34 ................................ TCTCATTTGCATCAATCCTTTAATCTTCGAGCAT 140612 32 100.0 33 ................................ ACATATGACTTATCCACATTGTCACATCTTGAC 140547 32 100.0 36 ................................ GGTACATATGACTTATCCACATTGTCACATCTTGAC 140479 32 100.0 36 ................................ CATAAACTTTTTCTCCTACTTCACAAGGTAATTTTA 140411 32 100.0 35 ................................ GGAGATAAGCTGGCTACAAAGGTTGCAGCTGGAAT 140344 32 100.0 34 ................................ AGAGGATACAATTTGATTCTTTCGATGAATGGCT 140278 32 100.0 33 ................................ AATCAAAATGTTTCATATTCTATCTCCTTTCTA 140213 32 100.0 35 ................................ GCAATTCCCCTATTTACATTTCCTCCTGAGTACAT 140146 32 100.0 34 ................................ TTTCTAAATCCCATGATCAAGCCTCCTTAAATAC 140080 32 100.0 35 ................................ GTTGTTTTTACTGATAGGCGGGTTAAAAGACTTAA 140013 32 100.0 35 ................................ GGGAGATCTGGTATTAAAATTCCGTTCTTTGAAAA 139946 32 100.0 33 ................................ AATATCTCTTACCATCCGAACAAAATTAAAGTC 139881 32 100.0 33 ................................ GATATTGTTACCTGCAGCTATGCCATCGATTGC 139816 32 100.0 36 ................................ GTTGCAAAAGCACCAAGTTATACGCAGCTACTTGTT 139748 32 100.0 34 ................................ TTTTATTTACTTTGCTTTTATCAGTTTTTTTTAT 139682 32 100.0 35 ................................ AGTGGCACCTTGAGAAAGTAGACATTCGCGAAAAT 139615 32 100.0 35 ................................ TTCTATACTGGCAGTCGGTATGACTTCATTAAAAC 139548 32 100.0 33 ................................ TGTTGGATGCGGTAATATTTTTCATGATTTATT 139483 32 100.0 34 ................................ CCTATTTTTTACTAAATTTTTTATTATTTTTACT 139417 32 100.0 33 ................................ CTCCTTTATCGCTTCTTTAATCGCTTTCTTTAC 139352 32 100.0 37 ................................ CCACAATTCCAATCTCTCTAATGTCCATTTCTTTCAT 139283 32 100.0 35 ................................ GTACCGGAGAAGGCGGAGAAGAAAATATCTTTAAT 139216 32 100.0 34 ................................ GATATGTTAGCAGAAGATTGGGTATTTGTGGAAT 139150 32 100.0 34 ................................ GGATGAAATTCTTGATATACTGCAGCCGAAAGAT 139084 32 100.0 35 ................................ CCACTTTGCAATTCAATAGCCACTTGTGTTCCGTT 139017 32 100.0 33 ................................ CTGTATAGGTTCCCTATAAGCGAGCTTAAATAT 138952 32 100.0 33 ................................ TTGAAGAAAAATTTAATATATTATCTCAACATA 138887 32 100.0 33 ................................ CTTAAAAGGCACTTTAACAATTCTCTCTAATGT 138822 32 100.0 34 ................................ ACTTTTCTAAGGATTATTACATCAGAGTACGTAC 138756 32 100.0 34 ................................ TATATATTCCACAGAAATATTTTTGCAAAGAAAT 138690 32 100.0 34 ................................ CATGAAGGATGGTGAGAAGAATGATTGGAAATGA 138624 32 100.0 35 ................................ ATGATTTGAGCTATACAGAAAAAGAAGGAGAATAT 138557 32 100.0 35 ................................ ATAAATGGTGATGATTTACAATATAGCAGAAAAGA 138490 32 100.0 35 ................................ AGTGAAACAATTGCCGAATTCGCAGCGGATTTAAT 138423 32 100.0 34 ................................ TTTGTTTCTGAATATACTCAATATCGAATTCTTC 138357 32 100.0 34 ................................ GGATTATTTGCTAAAATTCTTGGTTCATTAATGA 138291 32 100.0 36 ................................ TTCCACCGTCAGCAGGTGGTTAGTCTGTCAGAAAGT 138223 32 100.0 34 ................................ AAACAAATTGGGCGTTAAGGGCGTTTCTTATGAT 138157 32 100.0 34 ................................ TTGACGAGTATGAGAGAATTCTAGAAGAATGGGT 138091 32 100.0 35 ................................ GATATAGCGCTTCCAGAGATCATGCCTGCGAGCGT 138024 32 100.0 34 ................................ GGAAATTCGTTGCTATATCGCAAATTCCAATAAA 137958 32 100.0 33 ................................ AATATTGATGGTTGCTTCTACAATCTTATGGGT 137893 32 100.0 33 ................................ TTGACGGAATTATCGAAAATGAATTCAAATCTG 137828 32 100.0 34 ................................ TTTGGACGGTGAATTAACCGACCTGTGCGGAGGA 137762 32 100.0 34 ................................ GAACTGTCTTTCCGAGTATTCCTGCTTGTCTTTC 137696 32 100.0 35 ................................ TACCTGCCATCAAACATCGAAATTGGCGATAGAGT 137629 32 100.0 34 ................................ GTGATATGAAAGTACGAATTAAAATATTAAGAGA 137563 32 100.0 35 ................................ CATCAAGGCAGCTAACAGCAGACGTGCAAGCAGGC 137496 32 100.0 35 ................................ GAGGAAAACAGCTTAAAAGCATGGATGTGTGGAAT 137429 32 100.0 35 ................................ GATTTAAGGATGCCAGTGTTCGTGAAAAGATTGCA 137362 32 100.0 34 ................................ GTTACAAGCATAACGTAAAGTACTCCTTTTTTAA 137296 32 100.0 34 ................................ CCTCTAACGGTTTAAGGGATGCACCAAAAAAGAG 137230 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 102 32 100.0 34 ATTTCAACTCACGACCTCACGAGGAGGTCGAC # Left flank : CATGGTTGATAGCAGCATAATAAGTGCTACGAGGAAACTTAAGTGCAGAGCACATTTGTTTAACTGTATATTTATCGATGTTAGCCTGAATAAAGGACACGTATTCAGCTATTGATTTTTTGCGAATATGGCAGTAGCTTTTTTTAATATTTCATTTTCAATTTCAAGCTCCTTCATTTTCTTTTGAAGTGCTTTGTACTCCTTTAATGAAACAGTCTCTGTATCGGAAACTGCAACAGGTGCCAAATTCTTAATCCAGGTAGATATTGTGCCTTTTGGAATGCCATATTCGTTGCTTAATTCAGTTACGCCTTTGCCAGCTTGGCAGTGCAGATCAACAATCTGCTGCCTAAATTCTGGCGTATAAGATTTTTGATTTTTAGCCATTGTATTGAACTCCTTTTTATTTAGTATAGGTTGTTCAACATTTCGTGTCCATAGTTATATCCTAATACCAAGGTCGACCCCTCTCAATATGACAACTAACAGCCATAAAAAAT # Right flank : AGCAATTTTAAACAAATATTTTGTTTAAAATCCAATTATATTTGTTATTATTCACAACATAAAACATTCTAGATTTTATCTTAAATCCATTTTTCCATTTTAGGGCACATAAACTCAATATTTCTTGGTGCGAATCTCCCTAAAAATCTCTGTGCACTTGATATTCGCACTACAATATTAACGTATCTGTAACATCAAATCCCGGCTTCGCTCCTATATGTTCAACTTTATTTTTATATTTGTGCCCCAAATAATAAAACCTTAAACTATCTACTTCTTTATCAATAATCTTTTCCAAAATATTTTTTACTTGTCTACATTTCACAGCATCCATATGACATTCAAATACAGAATTCTGTACCCTTTGTCCATAATTTACACATTCTTTTGCAACCTTTCTCAATCTCTTTTTTCCTGCTGCAGTCTGTGTATTTACATCATATGTAATTAATACAAGCATCTTTTCACCTACTTCCAAAAAAATGGTGGATATTCATCCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAACTCACGACCTCACGAGGAGGTCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 2 146147-145324 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJIG01000001.1 Anaerostipes sp. 992a contig000001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 146146 32 93.8 36 .......T......T................. TCTATGTTACATTTAACTTTTTGCCCGATTTTAAAT 146078 32 100.0 33 ................................ GAAATGGAAAAGATGGGTTCATGCTTCCTCTTA 146013 32 100.0 34 ................................ TATGCACTGATGATGACAAGCTTTTTTCAAATAG 145947 32 100.0 34 ................................ GTTATACGATACTAAGAAACAACAAAGTCAAGGT 145881 32 100.0 33 ................................ AGGCATCTGTAATAACTTCAGCTTCATCTTGAT 145816 32 100.0 33 ................................ AGTGATTTCATGAAAAGCATCGGTATTGTAAGA 145751 32 100.0 32 ................................ GATGTATATGAAACATTGAATACTATAGAAGC 145687 32 100.0 33 ................................ GAAAAAGGAAGTGAGAATATGAAAACAAGGAAT 145622 32 100.0 37 ................................ TCGGAGGAAAGCTTATTAGATTTCTTTCGGATGGAAT 145553 32 100.0 34 ................................ CCCATATCCTTAAAGTCTCCTTTATACGTCCAAT 145487 32 100.0 34 ................................ AAGATACAAATGGAAGAAAATTCAAATTCAAAGT 145421 32 100.0 34 ................................ GAGAATTACAACAAGAACTGGTAACAATATTGTT 145355 32 93.8 0 ............................G..T | ========== ====== ====== ====== ================================ ===================================== ================== 13 32 99.0 34 ATTTCAACTCACGACCTCACGAGGAGGTCGAC # Left flank : CATTCAAAATTGTAGGTGTGGATATATTTCCCAATTGCCTTCCGCGCTTCACGGATATTGGCATACTGGGTAAGATATGCTTCCTCGTATTTAAAACTGTGAAACCATCTCTCAATCATGATATTGTCAGCCCAACGACTTTTGCCATCCATACTCTGCCGGATGTGATTTTCTTTGAGAAAATTTATGTATTCGTTGCTTGTAAATTGACATCCCTGATTTGAATTCAGGATAACAGGTTTTGTCACCTTAAATGCCTTTTTCAATGCGTTGATGACCATTCTGGTATCCAGGGTATCATCGACTTCCCAGCCTACAATAACGGCTGCCAGATATAGGAATCCTCGCTTGATGGGAATGTATGTAATGTCGATTGACCATGCCTGATTCGGACGGTCGATAACGGCATTTCGCAGCAGATATGGGCAGACTTTTGCCTGTTGCATACGTTTGGAAAGGTTCATCTGTAATTCCTTTTTTTATCAGCATCCTACTTACGT # Right flank : CTATGTCAAGACTTTGGACACAAAAAGTTGAACTTTTCTTTCCTTACTTAATCGCAAGGAGAGATGTTTTTTAACCTGCCAGAGCCTCTTCTTCAACCTGTTGTGGTGTCTTGTAATCAAGAGCACTATGGCGCCTTTTTCGATTGTAGAAAGACTCTATATATTCAAAGAGTGCAGTTTGTGCCTCCTCAAATGTGTGGTAAGTGGTAGGGTAGACCTCTTCCTTTTTAAGTACTGAATGGAAGGACTCTATACATGCATTATCATAGGGATTTCCCTTTCTACTAAAAGAATGAATTATCCCTTGCTCCTGTAAATACTTTTCAAATTCCTCGCTGGCATATTGACTGCCAAGATCACTATGAAGAATAATTCCTGTAGTATTTAGAGCCACCGACGGACCACGCAACATAGTTGTCGATCACTATGAAGAATAATTCCTGTAGTATCTGGTATGTTTAAACAGGCATTTTTGACAGCCTTTGTAGCAAGCTCTGCAG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAACTCACGACCTCACGAGGAGGTCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA //