Array 1 1101192-1104755 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP075950.1 Clostridium perfringens strain C746 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1101192 29 100.0 36 ............................. TACATAATATAAAGATCATCTGTTTCATTTTGTCTT 1101257 29 100.0 36 ............................. TCTATAAGATCACCAGTTAATAAAAGATTTAATTTT 1101322 29 100.0 36 ............................. TGTGTTAGCAACTGAAAACATTAAGAGCATTGAAGA 1101387 29 100.0 36 ............................. TAAATTGGAGGTGTTAACTTGATAGACTTATATAGT 1101452 29 100.0 36 ............................. AGAACGGCAAGAGCGTAAGGTGCTACAGTAGCGATA 1101517 29 100.0 37 ............................. TATGATTCAAACTATATTTGTAAATGGTTTGGTGTTG 1101583 29 100.0 36 ............................. TAATCAAGTTGGGCGACAGAAGAATCAAAAAACAAA 1101648 29 100.0 36 ............................. AAGAATTATCAATAACTTGTTTATTAGGTTGAACAA 1101713 29 100.0 36 ............................. AGAGTTTACTTTACATTCAGCAAAATTTGATGACTT 1101778 29 100.0 37 ............................. AAAACTATATGGCAAAGGGGAACAATACGAGTTATAA 1101844 29 100.0 36 ............................. TTAAAAGCAGAATAAGAAGGAACTAATCCAACCAAA 1101909 29 100.0 36 ............................. TGACAAATCTACACTAGCAAATCCTAATACATTAGC 1101974 29 100.0 38 ............................. ATATATTAAGAGATGAAAGTAAGCACTGTTGCTGATAT 1102041 29 100.0 37 ............................. GATTGTGGTAGAGAAAAGAAAAAACGAATAGCCAATA 1102107 29 100.0 37 ............................. GCAGTTGACATGTTCAAAGATAGTTGGGTAACTGTAA 1102173 29 100.0 37 ............................. ATGCCAGGAATCCATGAAGGTACATTAAAGCTTAAAC 1102239 29 100.0 37 ............................. TTAATTTCTTAACAATTTATTAAAATTTAATCTGTTC 1102305 29 100.0 37 ............................. TAATTACAATAAGACACTTCAATAGAACTAAATTGCT 1102371 29 100.0 37 ............................. CTATATAAATCTATCATGAGTTAACACCTCCGCTTTA 1102437 29 100.0 36 ............................. AAGACATGAATAAGAATATAACTAGTACCCTTTTCA 1102502 29 100.0 38 ............................. TCCAAATTGTGTACAAGGCATAAAATTATATAATACTG 1102569 29 100.0 39 ............................. GTATCTATATGTTTAGATTTTATAGCATTTGCAACTATG 1102637 29 100.0 36 ............................. GTAGATACATATGAAACTTTAAATGCTTATGTTAAT 1102702 29 100.0 36 ............................. TGTTTAATAGTTTTGAAGTTAAAGTATAAAGGTAAG 1102767 29 100.0 36 ............................. GCAGAAAGTTTTATTTCACCAGTGTTTAATGAGTAA 1102832 29 100.0 36 ............................. CTACAAAATCACACCACTTAATATGATCAACATCAC 1102897 29 100.0 37 ............................. TCTTTTCCACCTTCTCCTCTAATTATGTAAGGTGGCA 1102963 29 100.0 36 ............................. TTTTTATTGCCTTTAATTATATAAAAATTTTTTTAA 1103028 29 100.0 36 ............................. CCAAAACAAAGAAATAAATAAGGAATCTTAAAATTA 1103093 29 100.0 37 ............................. CAATAGAACTAAATTGCTTACTATTTATAACAATACC 1103159 29 100.0 37 ............................. TGTTGATATATTGGGGATGAATGTATCAACCTTCGTG 1103225 29 100.0 37 ............................. ATGATTTCAGGTAGTTCTTATATAGATATAGATATAT 1103291 29 100.0 36 ............................. GATTATATATAAAAAGGGTAATCCTATAGAAATAGA 1103356 29 100.0 37 ............................. AGATTATAGAATATTAGGCTATAGAAGTTTTTGGAGC 1103422 29 100.0 35 ............................. TTCTTTCAGTAATAATGTGAAAATATTTAAAGCTA 1103486 29 100.0 36 ............................. CTCTTTAAATGAGCTGTTATAGCTGTGTTAACCATT 1103551 29 100.0 36 ............................. CCATGTGCATTTAAAATACTAATTGTATCCATATTA 1103616 29 100.0 37 ............................. CCATGTTCATCATAAATTTTAAGCATATATTCTGTTG 1103682 29 100.0 36 ............................. AAAGCTTGGTGTTCTCTTTCCACGCTCAATCATGGA 1103747 29 100.0 36 ............................. TATAGAACAATCTCTATTAAGTTTAGAGTTGTACCA 1103812 29 100.0 36 ............................. TTACATCTTGATAAAACAGTAAATGAAGTAAAGTCA 1103877 29 100.0 36 ............................. AGTGATGTAATATTAATTTCAGATGATAATAATCAT 1103942 29 100.0 36 ............................. GGATCAGGAAAGAGTTTACACGTGGCACAAGAGATT 1104007 29 100.0 36 ............................. TTAGAAATATCCCACGGAATACAAAATGGAAAAACT 1104072 29 100.0 36 ............................. TTTCTCTACTCAAAAATAGTATAATGGTTTTAGGGG 1104137 29 100.0 36 ............................. GAAAGATTACCAGTCAGTAGGAGCTATCATTTGTGG 1104202 29 100.0 36 ............................. GAATTAAAAGAGCTATTAAGTATATTAAAAAAAGGT 1104267 29 100.0 38 ............................. TTTTGAACCATATACTGAGCTTGAGCTATTTCTTGTGT 1104334 29 100.0 36 ............................. AGAACAATTTTTAACTCAATTAGAAAATAGACTTAA 1104399 29 100.0 36 ............................. GTTGATGAAGGTACTTTGGAGAAGTCTGGTACTTCT 1104464 29 100.0 37 ............................. GTTAAACCTTTCTCGCCTTTAGCTCCAGGTTCGCCTT 1104530 29 100.0 36 ............................. TGGGTTAGAAGGTTTAGATCAGGCTAGTAAAGAAGC 1104595 29 100.0 36 ............................. ATACAAGAATCTGAACTTAAAGTAAGAACAGGAAGG 1104660 29 100.0 37 ............................. TTGCTTTTTAAGACACACTCTAAATATGTGCCTTCAT 1104726 29 86.2 0 .................GAA....C.... | T [1104753] ========== ====== ====== ====== ============================= ======================================= ================== 55 29 99.7 36 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACTAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGGAGATTTTTATTGATACATTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAAGAGAGAATGAGGCTATTACTAGCTTTTAGCATTTTGAAATTTGGG # Right flank : TATATAAAAAGCATCTTCAAACTTAAAATCATACTTTTAAACTTATAATTTTTTGTTTCAATAGCAAGTGAACCTAATGAAGATATATTTCCAACAATGTTTTGGCTTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTCATATTTAATACTTCCAACATATATGGTAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATAAGTAATTTTAGTTTTATAATAAGAATTAAAAAGTAAAATGGACATGATATCTGTCCATTTTTACTTAATTATTGATATATACTTATTAAATTTAGAACTTTGAATCTAATAATCTATATATTTAGCAGTTTACATCTAATATCTCCCTTGAAATTTCCTCGAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCTCATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //