Array 1 1391572-1385531 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP071869.1 Polaribacter sp. SM13 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ================================================================================================================================================================================= ================== 1391571 46 100.0 30 .............................................. ACATAAAACACCACCCACTAACATCTGAAT 1391495 46 100.0 30 .............................................. TGGTTCTACCTTATCTGATAGAACTGCATT 1391419 46 100.0 30 .............................................. TAATGCAGTAAAACATATTGGTTCACCTAA 1391343 46 100.0 30 .............................................. GTAATAGCCGCTTTACAAACCACTTGTTCA 1391267 46 100.0 30 .............................................. TATTTGGAATTTACCAAAATCTACAGATGA 1391191 46 100.0 30 .............................................. TAAATCATTTGGTAATATTTAAAGATTCTA 1391115 46 100.0 30 .............................................. GGCTGTTTTTTTAGATAACTGTTCTAAAAT 1391039 46 100.0 30 .............................................. GATAGCTACAAAGTAGAACATTTTAAGAAG 1390963 46 100.0 30 .............................................. ACTCCCTTCACTTATAAATCATCATCAAAT 1390887 46 100.0 30 .............................................. CACGCCAGTGTATTTGATGCAGGTGCATTA 1390811 46 100.0 29 .............................................. AATCAATTTATGAGCCATCCAAAAATTGT 1390736 46 100.0 30 .............................................. GTAACTCTTACAACACATAAGCAATCACCA 1390660 46 100.0 30 .............................................. AGTTTCATTAGTTGGATTGATTATTTTGTA 1390584 46 100.0 30 .............................................. TGGTAATAAATTAAGCTATTGTTAAATTAT 1390508 46 100.0 30 .............................................. ACTTATGATGAAACTATTAAATCCTACACA 1390432 46 100.0 30 .............................................. ACACGTGAATCATTACTTAAACGAATCATT 1390356 46 100.0 30 .............................................. ATGTATTTGAAACATTAATATTTAGTTTTT 1390280 46 100.0 30 .............................................. ACGGTTGCTGTAGATGCTACATTTGTTATT 1390204 46 100.0 30 .............................................. GTGATATATTCTATTGTATCTTTAATTATG 1390128 46 100.0 30 .............................................. AGAATTATAATGTTTAATTGCTTTTTCTAA 1390052 46 100.0 30 .............................................. GATATTGCAGCCATAGCGCCAGATACGCCT 1389976 46 100.0 30 .............................................. GTTGGTAAAATGAAGCGAAAGAATTGAGCG 1389900 46 100.0 30 .............................................. AAAACTGTGTTAAATAAGTGTCTTTTTGAA 1389824 46 100.0 30 .............................................. TTTACTCATATTATGTATTTAGGTTTAGTA 1389748 46 100.0 30 .............................................. ATAGACAGCCATATCGAACCGATTAGAGGA 1389672 46 100.0 30 .............................................. TAGTAGACCCAACATTAAATAATAGAAACT 1389596 46 100.0 30 .............................................. AATTAGTTGTATTCGGCATCCATAAAGAAC 1389520 46 100.0 30 .............................................. CAAGTTTTATTAAAATGGTTTTTCCAACAC 1389444 46 100.0 30 .............................................. AAAAATATATCAATGTTTTTCCGGATCAGG 1389368 46 100.0 30 .............................................. TAATATGGATGCAGTTATTTTATTAGGTTT 1389292 46 100.0 30 .............................................. AATTTTAATGGAAAGAAATTTGGATACATA 1389216 46 100.0 29 .............................................. ACCCTCCGTATTTGTAATAAATTTCTTTA 1389141 46 100.0 30 .............................................. AAAAGCGTTCCATTTCTATTTTTAGCAACA 1389065 46 100.0 30 .............................................. TGAAATGATTGGTAGAAAATTTATAATAGG 1388989 46 100.0 30 .............................................. TGGTTCTGGTACAGCTTTAATAGCTTGTGA 1388913 46 100.0 30 .............................................. GAAACAAATATGTTAACATTTATTTCTTCT 1388837 46 100.0 30 .............................................. TTGTACTGGTTACAACACAACAACAAAAAC 1388761 46 100.0 30 .............................................. TACGATAGAATTATTAATTTTAAAGGGCAA 1388685 46 100.0 30 .............................................. AAGTAATGGCTTTCGATGTAAAACACGATG 1388609 46 100.0 30 .............................................. GAGGATAGCGATGCTCTTAAAAAATCATTT 1388533 46 100.0 30 .............................................. TAAAATACCTATTCCATTTCAAAGAAAGGT 1388457 46 100.0 30 .............................................. GGATTATCTCCGTTAAAAAAACAATGTGAT 1388381 46 100.0 30 .............................................. ATTTTGTTGTCGTACCAATCGACATCCAAT 1388305 46 100.0 30 .............................................. TGTAGAACGTACACCGTTACCGAGGCCATA 1388229 46 100.0 30 .............................................. ATGATGATGGTTATGTTGTTGTTGAATTTT 1388153 46 100.0 30 .............................................. TGAACCACCATTCATAGAATCTCCCTTGGA 1388077 46 100.0 30 .............................................. ACAGTTGCGAATATTAAAAACCAGAAGGTA 1388001 46 100.0 30 .............................................. AAATTAAACAAAGGCGAGGTTTTGAATATT 1387925 46 100.0 30 .............................................. AATTATGGACTACAACCCAAGACGAAAGTT 1387849 46 100.0 30 .............................................. GCTTTTATTGTGTAGGTTGACAACGTGGTC 1387773 46 100.0 30 .............................................. TCTTGTTTGTTTGTTTTATTTTGTTTTACT 1387697 46 100.0 30 .............................................. TTACGTCGTTAAAGTCTATCGAAAGACTTG 1387621 46 100.0 30 .............................................. TTTATGCCGCTGCAAATTTCGGTCTTGGTG 1387545 46 100.0 29 .............................................. ACCTATGGGTAGGGAAATATCAAAAGAAG 1387470 46 100.0 30 .............................................. ATGGTTATGCTACAGAAAGTTGGGTAAATG 1387394 46 100.0 29 .............................................. TCTGCTGGAGTAGATAATTTAGAGTTAGA 1387319 46 100.0 30 .............................................. TGTAGAATTCTTTAGGTTTCCAGCCTTTAG 1387243 46 100.0 30 .............................................. CATATTGTTTGCATGCATTGCGCCTAATGC 1387167 46 100.0 30 .............................................. AATCCATTAATAGTCTGGTCGCCAGTAAGC 1387091 46 100.0 30 .............................................. AATTGGCAGTTGCTACTAAGAAATGGAAAG 1387015 46 100.0 30 .............................................. AGTTGGAAGTTTTATAAATATAGATAATGT 1386939 46 100.0 30 .............................................. AATGATAGCACACGGTGTAACTCCAGTTTA 1386863 46 100.0 30 .............................................. AAAAGAGTTGATGCTAATGTAGGTCAGTTT 1386787 46 100.0 30 .............................................. AGTTAGTTTCATATTCTATTATATTTTTCA 1386711 46 100.0 30 .............................................. TAACAAACCTTTATCTAAATACAATTTTCT 1386635 46 100.0 30 .............................................. AGTATAGCAGTTATTTATGAACATTCATTA 1386559 46 100.0 30 .............................................. GATGATTTGGTAAATGAGCAATTGAAGTCG 1386483 46 100.0 31 .............................................. TAGCATTACTGCTATGCCCTGTAATAATAGA 1386406 46 100.0 30 .............................................. AACATATTACGAGTTCATAACCAAAGTATT 1386330 46 100.0 30 .............................................. AGTCTATGCTATCGCCATTTTTTAAAGTTA 1386254 46 100.0 30 .............................................. AGGTGTGCAATGTTTGTGATAAATGAATTC 1386178 46 100.0 30 .............................................. GATACAACGATGCTCAATTAATTGAATTTG 1386102 46 100.0 30 .............................................. AACGTTAGAACCAGTCTTGTAATTTTCGTA 1386026 46 100.0 30 .............................................. GTGAGTAGTAGTAGGTTAAGACTTGCTAAA 1385950 46 100.0 30 .............................................. AATAACAGACCAAGAATTGCACGAAATTGA 1385874 46 100.0 30 .............................................. ATAATCATTTAGACAATGGCATTTTAGCCT 1385798 46 97.8 177 ........................................T..... CCTAAACCATTATTCCTTTTAGCTTGCTTTTTTGTTTTTTTTAATTTATTTTTGTTTCCTGTAACCTCGTAACCATGACTTGCGATAGGGGAATTTTCGCCTAACGATGTGGAGCGAGGTTTTTTATTTCTTCAATTTTATTGTCGCAATCAATTACACCATTTTCGCCCTCTCTTA 1385575 45 93.5 0 .....................-..................T....T | ========== ====== ====== ====== ============================================== ================================================================================================================================================================================= ================== 78 46 99.9 32 CTTGTGAATTCTCACGTAAAAATACAATTTGAAATCAATTCACAAC # Left flank : GTAAATATTTCTGACGAAAGAAAAAAATTACGTTTCGAATTGATGAAGGAAGAGAACGAAGAATATTTAGAGGCAGCACAAAATAATGATTTAGTAGAAGTTGCAGATGCTTTGGGAGATATGTTATATATTTTATGTGGAACGATTATAGAACATGGAATGCAAGATAAAATAGAAGAGATTTTTAATGAAATACAACGTTCTAATATGAGTAAATTGGGCAAAGATGGAAAGCCAATCTATAGAGAAGATGGTAAAGTTTTAAAAGGTCCAAATTACTTTAAACCAAATATTAAAGAGATTTTGGATAGATAGGTTTTTAGGGTTTTATTTTTTTCATTAACTGGTAAGTTAAAATTCCATTTTTAAAATCTACAAATTGTCAAAATAGAAATAAAAAAAACATTAGATTTATCACAAATTCTATATAGTCATAGAATTTTATAAGTTCTAAAAAGGAATCCCAAAGTATTGGTTTTACTCAATATTTTGGGATTGAC # Right flank : AATGATTTAATCAAGTTGTAGATAGATTTACAGGAGTTCAATTAGACAAACCATTAATTGCTAAGTTTGAGAAAAATCAAAGTATCTTAGACACCAATTTAGATATTCATATGGGAACTATTGGGGGCAACCCAAATTTTGGCTTTATTAATTGGTCTTTTTGGAGCAAGTTTACCAATAACAGGTTTCTTTATTTAGTGGGGAAGAAGAAAGAAATTGAAGAAAGAATGTGTTTATCATTTGTGAATTCTCACTTAAAAAAAACCAAATGCCTTGTTAAAAATTATGTTAAAAAGAATTATCAGGTAAAATAAAACTGATAAACTACTGTACATTTGTTATCTCAAATGAAACATTTACTTACATATTCTTATTTTAAATTATTTCTTACTGTTTTATTTACGTTTGTATTTAATAATAAATTACAAGCAAATACTTTACCAGTAAGCTCTAATTTAAATTCAATATCTTTTTCAACTAATAATTTAAATGAAAATGAT # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.16, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGTGAATTCTCACGTAAAAATACAATTTGAAATCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //