Array 1 30646-31651 **** Predicted by CRISPRDetect 2.4 *** >NZ_OPYK01000003.1 Atopobium massiliense strain Marseille-P4126, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 30646 28 100.0 33 ............................ CGTATGCTAACTTGTTAAAACAAATATATTCAA 30707 28 100.0 33 ............................ TAAATGAAGGTGCTAGAGCGAGCTTTTATGGTA 30768 28 100.0 34 ............................ CTGAACACGGAAGGTGCAAGCGCACTCATGCAGA 30830 28 100.0 33 ............................ CCTCAAGAATTACTACACGATTGTATAGCGCTT 30891 28 100.0 33 ............................ CATCGCACAGTATGGAACGCCGTTTGCTGCGCA 30952 28 100.0 33 ............................ CAAAGTACGACCTGGTAAAAAGGTGTCTCAATC 31013 28 100.0 33 ............................ CGGTCGCTTTCAGGCGTTGCTTGCGCGCTTTTT 31074 28 100.0 33 ............................ TAGAATCGGTTGAGCACGTAATCGGCAACCTGA 31135 28 100.0 33 ............................ CGAGGGTTTTAATAAAGGCAAGCAGGAAGGAGG 31196 28 100.0 33 ............................ TACAGAAGGCGCGTCAGCACTGATGCAGAAACT 31257 28 100.0 33 ............................ TTGGTACACCTGAATATCACGGAGCACAACAAT 31318 28 100.0 33 ............................ TGGCGTAATCGCACTGGCGATGTTGCGCTGGCG 31379 28 100.0 33 ............................ CAACTTGTGCAATATTACCTTTTGTTGCTTCAG 31440 28 100.0 33 ............................ CTCACATAACCTATTAAGTCGCGGCGGTACGTG 31501 28 100.0 33 ............................ CAACTGCCGCCTACGCGTCCGCGGACACACGCA 31562 28 100.0 33 ............................ TTTCACGTTCTGCGCTGCGTCCATCATCTGAGT 31623 28 89.3 0 A...................A......T | A [31645] ========== ====== ====== ====== ============================ ================================== ================== 17 28 99.4 33 GTTTTTCCCGCACACGCGGGGGTGATCC # Left flank : AGCGGACGACAAAATAATAGAAGTAGGGGCAATTAAAATTTGTGACAAGCATATAGATTCATATCAGTGTTTAATTAAACAGGATTTATTGGAGCTTTCCCCAGCTATAACCCATCTAACTGGGCTTACCGATAGAGATCTCGCCAACCGAGGGGTAAGTCCTAGTGCAGCTCTTAATGGGCTGAAACAGTTTATAGGAAATTTGCCTATTCTAGGCTATAACATTGCATTTGATACACGATTTATAAATAATGAGCTGCGCTCTATGAATGAAGAGCTCCTTGATAACCGAGAAATTGATGTAATGCGATTTATCAAGAAAGAAAAGATGTTCTTAGAGAGTTACACGCTTGATAATGTTCTTAAAGTGTATGGAATCTCAACTCCTGTTCCACACCGTGCACTTGGAGATGCTAAACTGATAGCAAAGCTTGCATTAAAAGTGAATAAAATCTTTAATATTCTTTAGTTAACGCAGCTTTGAACAGGGGATCTTATGA # Right flank : TGGAAATGCAGATATAAATTCGCATCATTATTTTGTTATTACCAAAATAGTTCTATACAAGTAAGCAACTGAATAAACTTGCTGAAAGCATGCATTTCATAGCAATGTTTTTATTCACAACTATTAGAGAAACCATCCGATGGAAAACCCATAAACCGCAACACTTACAACGCGTAGTTTTAATATTACCAGTTAGCCGTTTTCGAAAGCGGCGTAGCAACCTTGCTACTAAACAAACGCTCTAGTTTAATTAACACTAAAGAACGAACTGATAGCGACTTCCAACATAATACTGTTTACCAATCGATAAAGGGTTTTGTTTTTGATCAAGAAATAAAATATGAAGATATAGAAGAGCAGCGCGCAGGTTAATCTCTAGATTATGTGATTGCTCTATATCCGCATTTACTGCTTTTATTGCGCACTCATGAGTGTTTTTCGGGTAAATGCCATATAGAGATTTCAGTGTCATAAATAAAGACTTGTCCTCAAGATCAGCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //