Array 1 23795-24115 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKK01000122.1 Actinomadura sp. 7K507 NODE_122_length_26741_cov_23.2413, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 23795 36 100.0 35 .................................... CAGATTGTTCACTGGCCGCATCAGGCACCGGTTCT 23866 36 100.0 36 .................................... CCGTTCGCCAGCTTGCTGGTGATGTTCCAGCGGCGG 23938 36 100.0 34 .................................... CTGTAGGGGAGGTCCGTGGCCTTGTTCCGCTCTA 24008 36 100.0 36 .................................... CCCGAGGTGGGGTGTCTGCTGGCTGGCGGACATCAC 24080 36 77.8 0 ............A.......G.....A.G..T.CGT | ========== ====== ====== ====== ==================================== ==================================== ================== 5 36 95.6 36 GTCGCAGCGCTCCACAAAACCGCATCGGATTGAAAC # Left flank : GGCTATGAGAAGTCGGGGGCGACGTGGAAAACTGGCAGGGTGCGTGGGCCACGGCGGAGCACCCAAGCCGTCGGAAGGAACGATGGGCGATGTGATCGACATGGTCGGCGAGCTCCGCGTCCCACGCCGGTGGCTGCGTCCGACCGGCGTCGGCCGCGGGATCGTCTGTGTCACCATGTTCGTCCCTGGCCTGGATGGCGTGCATTGCAGCCTCCGGTGCCAGCCGGTCGAGCCACTCCTGACAGGCTGTGCCGCAGTGCTCGGCTTTGTCGTGGAGTCGGCGACACCTCATCGTGTTCTACCCCCGCACGTGGCCAGTGCGCCGTCATTCGACCATTCAGTAAATTGCGAAGAGGTTGGCGCACACCCTCAAAAGCCGGTCTCACCTGCACAAACGTCGCCCCGAAGATCATCTCCAGCACCTCTTCAAGATCGCTTGCGAGGGGGTTGGCGCATGATCTTGCAAACCCGCAGGTCAGACCCCCATAATTTGGGGTACT # Right flank : TCGATCCTGGCGGCGCACCTTTTTTGGTTTGTGCATAGGTGGCGGTGGCGGCGCTGGACCAGCCCGCGTCCAAAAGCGAGCTGAGGGCTGCGGGGATGCTGAGTATCGACGCTCCCCAGATTCGATTTAAGCGGGAGCGATCTCGCTCGTTGACGGCCCCGGTGGAACGCACAAAGGCTCGGCGACCCGCTGGTTGCTGTGGGGCGCCGAGCTTTGGCAGTGCGCTTTCAGAGCGGTTGGTGACAGGGTGTCGCAGTTCTGGAGTCCCGAGCGTGGGTTCAGGTGGGAAGTGTGTCCGGAACCGGTCGTAGCGGTTGTTGGCGGCGTCGTGGTGTAGGCGGTCCAGCGGCCGTGGTCGGCGGCCAGCCGTGCGCCGAGTGCAACCGTGATGGCGACCGGACCGCTCAGGAAGCTGGCGTGCCGACCGGTGCGGGCACCGTCTGGAAGTTGAGTGTCGAACCCAGTGCGGCAGATCTACGTCACCGCGGATGTGAAGCTTT # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:0, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGCGCTCCACAAAACCGCATCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 1 2751-2432 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKK01000131.1 Actinomadura sp. 7K507 NODE_131_length_26023_cov_23.7336, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 2750 36 100.0 33 .................................... GGCAGCTCTTCCAGGGCCTTGCGGCGCGAGTAA 2681 36 100.0 35 .................................... CGACGCCGTTCGGCCCGGGGACGATCACGGTGTGT 2610 36 100.0 35 .................................... GAGGTCGAGGTCGTGAAGCGCGGCAGGAACAACTA 2539 36 97.2 36 ............T....................... ACAGTCGGTGGTGTGGGCGTGTGCCATTGGATTTTA 2467 36 72.2 0 .C............A.......T.....GAAC.TTG | ========== ====== ====== ====== ==================================== ==================================== ================== 5 36 93.9 35 GTCGCAGGCCGCCACAAAACCGCATCGGATTGAAAC # Left flank : CTGGAAACTCCTCATGCAGGAAGCGCCAGCGCTCAGGTCCCTCAACAGACTCCGCAACGAAAGCCCCTATGCCCATCTACTCGATAAACTACGCGACGCAAAACGGACGCAACCATCCACCAAGAACATAAGACTCTCGAAAACACCACCGAGTCGAGACCGGGTGGTCGAATTGCTTCACCAGTCAGCCACCGAACTCCGTGCGCTCCGCAGTGCGGGCAACCACTCGAACGAGAGGGACCAAGACCTGGTCGCCCGCTACACACGGCTGGGCGAGCAGCTCGATGACCTGGGAAAGGACGCCCGTTGAGCGATGTCATCCGGCACATCCACGCGTCCCAGTGGCAGAACCGAGGTTGGCGCACACCCCGAAAATTGGTCATGACCTGCGACGATGCCCCGCCAGAGATCATCAACCCAGCCTTCGGGCAGCCGTCCAGCCGGAGGTTGGCGCATGATCTTGCAAACCTGCAGGTCAGAAGCCACTAATCTGGGGTACT # Right flank : GCAGTGGTGGACCTCCGTGGATAGATGGAAAGTTGGGGCGGTTGTGGTGATTGCTTGACTTGAGTGGTCGTTTCGCTGATACTTGTGTGGTTCGACGGCTCAAGGGTCGAAGAGCATTTGAGGCTTTGTGCCTCCTGAGGAAGGCCGTGGTTCCCAGGTTCTCTGCCTGAGGGACGGACGGTCTGCTGGAATGCCTCAGGAGGTTTCGTGCGGCCCGTCGCCCATCTTGCTGATCAGGACGATGCGATCGCGTTCGCCGCGTTCCACACCCTCGTTTCTCCGGCGCTGCGCGCTGTCGCGCGTGGTCCGCTCCGGCGGGCTCGGCACTCTGGCCGTGCCTGTGAGGCGCCGGTCGGCGCCGGGTGGTGTGCCGAGTGCGAGGCGTCCGCTGACGATCTGGTTATGGAGAGCTTCACCCGGTTGCGGGCGGCGCTCGTAGGACCGTTGCCGACAACCCGGTCCGGGGAGCCGGTCCGCGAGATGGCTTTGGTGTGTGAGCA # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:0, 3:3, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGGCCGCCACAAAACCGCATCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 2 15164-14492 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKK01000131.1 Actinomadura sp. 7K507 NODE_131_length_26023_cov_23.7336, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 15163 36 100.0 38 .................................... TTTAGGCCGGTCTTCCGCGAAGTACGGTCGAAGAGACA 15089 36 100.0 35 .................................... CCGTCGGCTGTGCTGGCGGTGGCTCCTTCGTCGGC 15018 36 100.0 35 .................................... GGTGCTGTCCATGGTTCACCTCTTCTCGTTGGACA 14947 36 100.0 35 .................................... CAGGTGACGATCGGGCGAACCACTAGGGTGTCACC 14876 36 100.0 35 .................................... TTCGTGTCGACGCCGTCGCCCTCCTTGAACTTACG 14805 36 100.0 32 .................................... TTACAGCGGTGCTTGTTGTGTCTCGACACTAT 14737 36 100.0 35 .................................... TTGCCGGCGTGCTGGAGGAACAGTGGGTACATCTC 14666 36 100.0 39 .................................... AGCGGCGGCGCCACCACTGCGGACGGGGCTGTGTGGTCG 14591 35 88.9 28 ...........T.................A.-...G TTTTTGAGGGCGGGGCATGTCTATATCA G [14563] 14527 36 72.2 0 T......T..C................C.GC.CGGA | ========== ====== ====== ====== ==================================== ======================================= ================== 10 36 96.1 35 GTCGCAGCGCTCAACAAAACCGCATCGGATTGAAAC # Left flank : CTGCAAGTTGGCCAAGCGCACGGACCACGGTCACCTCCCAGGGGGCAGCCTCGCTCAGGCATCGGTGTTTGAACAGCAACGAGAATTGGAGTGGTCGTGAGAGACTGGCTGGGTGCGCGAGTTCCGATCACGTACCGCAGACATTCGCGGGACGGCGTTGCCTATGCGGCCGCCCCGATCCGGTGTTGGTGGCCGGGTGTGGATCTCTTGGCCTTGTCTGGGCTGGTCACCGTGACAGAGCTGCCCGTAGGATCTGCTGCGGCTGCGAGGTCGCCGGTGCCTGTTCCATCGTGTGCTCCTGCATCCACAAATGGCCAGCATACCGTTGTCCGGCCATTTCAGAGAAGGCCGGGAGGTTGGCGCACACCCCGAAAATGCCTTCTGACCTGCGTAAACGCTACTCAGAAGATCGTCTTCGGGGTGCTTTCAAGGTCGCTTGCGAGGAGGTTGGCGCATGATCTTGCAAACCTGCAGGTCAGACCCCCATAATTTGAGGTACT # Right flank : TTGCGAGACCATGCAATGGCGTCAGTAGGAGGGGCTGCTGCCGCGCTGGCCAATGGCGTGGACGACGATTTCCCGCGAATGGCTGTGCCCGATTTTGGCGCTGAACCGGAAGGCGGCGGGCAACGGCATCGTCGGGATCACGTTGATGCGGGTGGCTCCACTTACCAGTCTTTCCGCGATCCCCGCCGCGGCGATCGTTTCTTCCGTGAGCGCGTCGACGCCCTCCTTGGGCCACGGGTGCGTCGTGGGGAGCGTGAGGTGGGTCTTCACCGTCACGGCGTATAGGTCCTGGCGGTACTCGGTGGCCTTGCTTTCGAGCAGTTCCGCTCGGGCGGCACCGCGTCCAGGGCAGCTGCGGTGACGACGATTCCGATCCGCGTTTTGGTCGACGCGTGAAGCCGCAGGCGGGCACCGACCCCCATGAAGGCGAGCCCGGCGACACGCCCAAGCAGAAGCCACCAGCGTCCTGCGGGAGCGTCGGTCATCACGGACTTCGCGGT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:0, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGCGCTCAACAAAACCGCATCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA // Array 1 2768-3221 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKK01000436.1 Actinomadura sp. 7K507 NODE_436_length_3289_cov_18.7081, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 2768 36 100.0 34 .................................... CAGCGCTCCAGGCTTTGAGTCGATTACGATTTTA 2838 36 100.0 33 .................................... CTGTTGCGAAGAGTGAGCGCCTCTCTTTCTATG 2907 36 100.0 35 .................................... TTGTCGGACGTTGACGTCTAATTGCCGACAACATG 2978 36 100.0 33 .................................... CGGAGCAGCGATCCCGAGGACGACGATCACGGA 3047 36 100.0 33 .................................... AGAAGCGCCGGGAGAACGCGGGGTCGTCGTCGA 3116 35 94.4 35 ....A.........-..................... TCAGAAGTCAGCGACTTCATCTAAAACGGCACATT 3186 36 86.1 0 ..............................AA.TTG | ========== ====== ====== ====== ==================================== =================================== ================== 7 36 97.2 34 GTCGCAGCGCTCAACAAAACCGCATCGGATTGAAAC # Left flank : AGGAAGGCTCGCTGGACGATGCGGTCACAGATGGTCGGCAACCCTCGCGTCCGAAGCTTGCCGCCTCGCATCAGCCGCACCGGCCGCAGTGGCTGGGCCTGGTACCTCCGCTCCCGCAGCAGCGTCGCCAGTGCCGCCAGCCTGGGCCCGACCTCACGACCGAACACCGCCGCCGAGACCCCGTCCGCCCCGGCCATGCCGCTGCCCGCAGCCACCCGAGACCAGGCGGCCCACAGCGCCCGATCACTGGCGATCCGCTCGACCAGCCGCGACGTCGGCCTCATCTCCTCATGTGTCCTCATGCCCACAACCGATGGACGAACGGCCTTCCAACCCTTTAAAGAAGTGTTTATAGGTTGGCGCACACCCCTCAAAGCCCACTTGACCTGCGCAAACGGCGCCTTGAAGATCACCTCTGCGCCCTCCTCAAGATCGCTCCCAGGGAGGTTGGCGCATGATCTTGCAAACCCCCAGGTCAGACCCCCATAATTTGAGGTACT # Right flank : AGAAACGCGCGGCCCCGGAACTACGGGACCGCGCGTTTGGGTGCGGGGGTCGGTCAGCGGTGTGGGGG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:0, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGCGCTCAACAAAACCGCATCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [12,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 1 28620-29249 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKK01000083.1 Actinomadura sp. 7K507 NODE_83_length_35493_cov_21.268, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 28620 30 100.0 37 .............................. CAGTGCGGCAACTGGACCCGGTAGGTCTTGTTCGGGT 28687 30 100.0 37 .............................. ACGTTGGCTGCCAGGAGCCCCAGCAGCGCCGGCTCTC 28754 30 100.0 37 .............................. GGCACGTGGAACGCCGTGGCGGTCAGGTGGTAGACCT 28821 30 100.0 38 .............................. TACAGCGGGCGGCCGGACAGGAACCGGTAGGTCCCGCG 28889 30 100.0 37 .............................. GCGACGTGGCTGATCGTGACGTGCGTGTTGTTGAACG 28956 30 100.0 35 .............................. CTGGCCGCCGACGCCGCCACCAAGCAGTACGTCGA 29021 30 100.0 38 .............................. CGGGCCAGCAGTGCGAGCCCCGCGGCGTAGGTGCCCGT 29089 30 100.0 33 .............................. CTGAGACGCACCCCCAGCGCGGGACCGCACGTG 29152 30 100.0 38 .............................. TTGGTCACCGCCATCTGCCGGGCCGCACCCTGCTGAAC 29220 30 96.7 0 ...........................C.. | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 99.7 37 GTCCTCATCGCCCCTGCGAGGGTTCGCAAC # Left flank : CGAAATCTCAATAAACTTAACCACGAAGCGCTTGTCCGGATGTGGCCTCGGCCTTACGCGGAGCTATGCTGACCAACAAGATCGCCCCGCCAGGGCGCCGCCCGCAGGGGGTCGCAACTGGTTGAGTTTCTTGGTGGACGCGTCCACAGACTCGCTCTCATCGCCCCTACGAGGGGTTCGCAACGCGGTCACCCCGCCTGGCTGTCCGAGCGTCAACTCATGTCCTCATCGCTCCTGCGAGGGTTCGCAACACGACGCCACGACGTACGGCGAAGGCGGGGGATGCGAGGCCTCCGACACCGGCGAAGGTGTTAGATGTTGCGGGACCGCGGGAGAGCGCTGACCGCGGTCATGCAGCGTCTCGGTCACCCGAGCCTCCAGCGAAGTTGATCAAGCGGTTTCAGCGACACGCCGGGGCCGACAGCACGACCGGGGGATCACTGCAGATTCCGCCTCCGGCAGCTGTTCTTCCATCTGCCCACCTGGCGCTTTACCGTGGG # Right flank : CCTCGGGGGCGCCTTCGTAGCCGCGGAGGGTCTTGAAAAGACGACATCGAGGTCCCCGGCAACCGCACGATCGAAGCCATGGCGATGGCAGAACAACTGACATCCAACGCCGTCCGGGTCGACCTGATCCCGACCATGCGTCTGCATGTCGCATTTGCTGTACAGCGCGCAGCCCGGCCACACGCACGCGCGTTGCGTCATGGTGCCCAAGTTGCGCCTGCGCGATGGCAACTGTCGAGCGCCGCAACCGGCGTTATCTGAAATAGGCACCGCCAGCGTCAATCCGATGCGGTTTTTGTTGAGCGCTGCGACCGGACTGCCTCAAGCCCAAGGACCCCGGGGACTCAGTTTCAATCCGATGCGGTTTTGTTGAGCGCTGCGACTGTCATTGGTGGAGCGGCTGCTCTGGGCGCTAACGTTTCAATCCGATGCGGTTTTGTTGAGCGCTGCGACAGTACCTCAGATTATGGGGGTCTGACCTGCGGGTTTGCAAGATCATG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTGCGAGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //