Array 1 74057-74756 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFJYF010000009.1 Lactiplantibacillus plantarum subsp. plantarum strain M19 M19_assembly_contig_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 74057 36 83.3 30 .....G..A.........G..G.CG........... AAACGTTCTATGCTTCGTTTCCTCAGCATC A,G,TT [74059,74062,74071] 74127 36 100.0 30 .................................... GGCATGTTAGTAGTTTAGGCGCCCTCCAAA 74193 36 100.0 30 .................................... CGTAAATAGGTTGTAAACGTTCAGGTCTGA 74259 36 100.0 30 .................................... TAATACGATCCATTGACTCCGCTAGTGACA 74325 36 100.0 30 .................................... CAGCTACTTCATGCTGGCTAAAAGTATCTG 74391 36 100.0 30 .................................... GATTGACTTTATCGATTACTTCCTGCAATT 74457 36 100.0 30 .................................... TATTCTCGTTTATCGCTTTTAGACGTGTTA 74523 36 100.0 30 .................................... CAGGTCAAACGATTGTACGGTGATGGGGTA 74589 36 100.0 30 .................................... AAGCGCGGGATCACGTGCAACAGCACCATC 74655 36 100.0 30 .................................... ACGTCGGCAAACTGTTCCAATCCTTGACAT 74721 36 97.2 0 ..............................T..... | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 98.2 30 GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC # Left flank : ATGTTAAGTCTGGGTTGTTGTCAAAATTAGATTACTTTGAAATCGGCTATGTCTCCTTCCTAATTTCTGGATTGGGGATCTTCGCCTATGACTACTTGACCGCGCTTGGGTTACCAAACGTCGTCGGTAGTACCATGTCACTGAACATCATCATCTTTGGTAAGATTTTCTACCTCTTCAACTTGCGAAATGACCACCCCGTCATTTCCAAGTACTTCTTCCAAAATAAGATGGCGTTCTACATCATTGGTATCCTGATTCTCTTACAACTGGGAATCATTTACCTACCATTCATGCAATCCGTCTTCCATACGACTAGCATCAACTTCTGGTATGGTTGGGGCATCCCGATTATCTGTGGGATCGTCGTCTTGATTGTGACCGAGGTCGGGAAGTCTATTCGGTTCCGATGGATGGGAAAAGATGGCGTGATTGATTAGTAATTAGTTAATAAATAGAAATGGCTCACCAACCTGTTTTAGTTGGTGAGCCATTTTTTA # Right flank : CCAGCATTTTAACATCATTTACTCATTAATTCATATCACGCCAGTCTACTAAATCCTCGTCAACATAATAATAACAACTATTTTTGAACTTTTCCATTCGATTTATTTCTGAGTATTCGATAACAATGACAGTTGCGCCCAAATCATGCACTAGTTGCTCAAAGCTCGCCCATTGTTTTTGATTTAAGTAATGGCTGACATTAGTCAACACCAGCTTCTGTTTCAAACCTAGTTCAACATGCGTTTGCACAAGTGCCTCCAGTATTGCCCTTGGGTCATTCATAAGCGCCGTTGGAAAGTGAATACCGGTAAACTTCAATATTTGTTCTAGGCTAGGCGATTCGTCAACATCTAGCGGTAAGTCTAGTAAGAAGCTGGCTTCCATTACTTGCGAAACTACTTTACGATTTTCATCTAAGACCGCTACTTGCCGATCATCAGCCATTAACTTGATAATTTGGGTCTGCACTTTCTTTAGAAAAAGGCGGTTCAAATCGACT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //