Array 1 23106-23682 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZJL01000056.1 Chromobacterium vaccinii strain MWU205 contig00056, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 23106 29 100.0 32 ............................. GCTGAGGTGGGCGAACGGATCGAAAAGCTCGA 23167 29 100.0 32 ............................. GCAAGTTGATCGTTGTTGAATTTTTTACTTGC 23228 29 100.0 32 ............................. ACGGTCGCGCTCAGCAACCAAATGCGCTTGAA 23289 29 100.0 32 ............................. ATCCTGCAGCTGCCGACCACGCCGGCGCCGCC 23350 29 100.0 32 ............................. TTAGTTGACGCGGGCCGGCATGCCGCCGCCCA 23411 29 100.0 31 ............................. GGGGGGGAGGGAGGCGGCTCCTAGCTCATAA 23471 29 100.0 32 ............................. GCATCCAAGCCTGGCAAAACCATCTTGATGGC 23532 29 100.0 32 ............................. GCCTCGCCGCGGCGGCGGCGTGGTCGGCAGCA 23593 29 100.0 32 ............................. GCGCAGATGCCGGGATGGAGTGGATCGAAAGC 23654 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 100.0 32 GTGTTCCCCACGCACGTGGGGATGAACCG # Left flank : TCTTGCCCACGCCGGGCGGGCCCCACAATATCATCGAGTGCGGCTTGCCGGACGCCACCGCCAGGCTAAGCGGCTTGCCCGGACCGATCAGATGCTGCTGGCCGATCACCTGATCGAGCGCCTGCGGACGCAAGGCCTCGGCCAGCGGTTTTTGCGGTTCGACGGAAAAAAGATCGGACATGGCGCGATTTGGGCGGGATGGAGCGGAGAAACAGTATACCAGTTGGGGACCGGCATGAAAAAAGCGCCAGCCAGGCGCTTTTTGCTTGCATGTCATTGGAATGTCGTTAGTCTATGGCGTCTGGCCGAGCAAAAGCCGGGCTGTTGAGAGGCCTTGCGCCCAGGCTCTGAGGCTAGCGCGCGGCCCGCTTGGAGAGGGACAATTTCCCAAGGCCGCGCGGTGGTTTGCAGGGGGATTTGAACGGCGTTTTATGGCCGGAAAAATCGGTAGAATTTCAGAGTGGGTTTTTATCTTTAAAAATCAGCAGTTTGAAAATGGT # Right flank : ACTTGCCGCCGATAGTGGCATCGCCGGTGGTGGTGTTCCCCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 11804-11165 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZJL01000077.1 Chromobacterium vaccinii strain MWU205 contig00077, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11803 29 100.0 32 ............................. GATCGGTTCAGCCGCAACGAGCGCGAGCTGCT 11742 29 100.0 32 ............................. AATCCGAAACGGGTACGTTTCGGCCCTGAATT 11681 29 100.0 32 ............................. TCTCGCCGCAGCAATGCGAACGCATCATCAAA 11620 29 100.0 32 ............................. ACGCTTTATTCGCTTCATTCAATTAAACAGTT 11559 29 96.6 32 ...............C............. CGCCGTAACCATTGGCATGGCGATACAGTTTT 11498 29 100.0 32 ............................. CTTCACGTACTTAACTAACCAGCTTTCTTCGC 11437 29 100.0 32 ............................. AACCTATCGGTTCTTCGTCATCGGACAAGCCG 11376 29 100.0 32 ............................. CTCTTGGGCGCAGTTGTCGATACTTCGATCAG 11315 29 100.0 32 ............................. CGCCTTGTCGCGGTCTGCCAGCAGTACCTTGA 11254 29 100.0 32 ............................. CGTGTTTTGGGATGGATTGAAATGGATGATCC 11193 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 11 29 99.7 32 CTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGCAGGA # Right flank : TGATGGGATGGGGTTGGGATTACTTGAAAGAGCTATTTCCACTCCCGCAGGGATGCGCTGTTATCTTGCAATCCGTCTATATCTTTCACGCGGGAAGCCGTTTGCCATTCAATTCCGTTCCCTGCTTGCGGCGCTTGGGTGGCGCTTCCTATGCTGCAATGGTTGAAGCTAGAGGAGTCGCCATGCAGCAGTTGAGAACGGGTTTGCTGGTTGCCGCGCTGTTTCTCGCGGTGGCCGTTGTTTCCAGATCGCTGGCCAGTTCCGTCACGGAAACCATGCCGGTTTGGCTGGGCAGCGGGGTGACTTTTTCCGCGCTGCTGATCTCTCCCCGCTGGCGCTGGCCGGCCATTCTTGCCGGCGTGTGGCTGGCGTCGATGATCTGGGGCATGGCGGCGCATGGCCTGAATCCGGTGGGCGCGGCGGCTTTCGCCAGCATCGAGGCGGTCAGCGGCGCCATGGGCTGCTGGGTGGCCAGCCTGGGGCGCAACGATCCGGACACT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.87 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 1 525-8 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZJL01000078.1 Chromobacterium vaccinii strain MWU205 contig00078, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 524 29 100.0 32 ............................. CGCAATAGCATACTTCTCCGTGAAATCACCAG 463 29 100.0 32 ............................. ACCGCTAACCTGCGGCCTTGTCGGCTCCAGGT 402 29 100.0 32 ............................. GAGCCATGCGAGTTTGCTCGTATCCGCAACTC 341 29 100.0 32 ............................. ATGGAAAAGCGCGGCGCTATTACGCTGGCCAT 280 29 100.0 32 ............................. GCCGACTAGCTGCTGCATCACACCGTAGTATT 219 29 100.0 32 ............................. GCCTGACATGTCCGTCTTTGTCGATTGGATCA 158 29 100.0 32 ............................. GCACGCTGAAGCAAAGCCTCACCGCCATTTCC 97 29 100.0 32 ............................. TCGTCGTCTAGCGGTTCATCCGGCTCTAGCGG 36 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 100.0 32 CTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : CGGACATCGAAACGATGCTGGACGCCGGCGGTTTGGACAAACCGGAGGAGCAGGGCGTGGTGGGCGCGGCGTTTCCGGAAGACGAGGGACTGGGCGATGCTGGTCATCGTGCTTGAGAACGCGCCGCCCCGGCTGCGTGGCCGGATGGCGATCTGGCTGCTTGAAATCCGCGCCGGCGTTTACGTGGGCAACTACAACCGCAAGATCCGCGACTACCTGTGGCAGCAGGTGGAGGAGGGGTTGGAAGACGGCAACGCGGTGATGGCTTGGCAAGCCGCCACCGAGGCCGGCTTCGACTTCGTCACGCTTGGGGCCAACCGCCGCATGCCGGCCGAGTTCGACGGCGCGAAGTTGGTGTCTTTTCTGCCGCCTCCGGTACCGGAAGAGACCCGTGAATAGCATGTGGATCGCTTTGCTTCAGGGGGCGATTTGGCTCTTCGAAAATCGGTAGATTTTTAGGTGGTGTTTTTATTTTGCAAAATCAATTGCTTGCGATTGGT # Right flank : GGCTTGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 11592-11133 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZJL01000078.1 Chromobacterium vaccinii strain MWU205 contig00078, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11591 29 100.0 32 ............................. GCAATATCGGCAAAGCTGAGGCCGCGCCCGTA 11530 29 100.0 32 ............................. ATTCCGCGCGTACCCGGCGGTTTCGGCACCGC 11469 29 100.0 32 ............................. GAGGGGCGCGAGAATCTGCCGCTGACCGACGC 11408 29 100.0 32 ............................. GAGGCGGTGACAGTTACCGGGAGGTCAACAGA 11347 29 100.0 32 ............................. TCGTCGACTTCGTGCATGGTCGCTTGGTGTGG 11286 29 100.0 32 ............................. ACGCGCTCTACGCCCAGGGCCGCACCAAGCCC 11225 29 96.6 32 ...............A............. TGTTCCGGCAACTGTTGGGCCATCTCCAAATA 11164 29 86.2 0 .C.........A..C........C..... | TT,C [11137,11140] ========== ====== ====== ====== ============================= ================================ ================== 8 29 97.9 32 GTGTTCCCCACGTGTGTGGGGATGAACCG # Left flank : GT # Right flank : CTATATCAGTCGTTCAAAAGTTCTCCATGCCGGCAGGGATGCGTTCCAAACTGCCTGCCATGCCGATCGGCGGGTGATTCACATCCGATCGCCGGTTTCGTTCAAGTGGAAATGATGATGCTTTCCGCCCATGCAGAACGAAAGGACTGGCTATGCCCTGGATGACCGACTTGTTCCGTACCGCCAATGACGCCAGAGGTCCGTTTCCTGATCGCCCCTTGTCGTGCGTCACGCTGCCCGGGACGCACGACTCTGGCTGTTATGTGGACCGGGCGGTGAGCAACGCGCTTTCCAAAACCCAAAGCCAGGACATCTACGGCCAGCTGTTGGGCGGCATCCGGTATTTCGATATCCGGCCATGCGTCAAGGATGGGCGGTTGTTCACCTATCACGGCGAGTTTTATACCGGCGGGCCGATAGATGGCGAGGATGGCATTCTGATGCAGCTTCGCCGATTCATGCTGGAGCTGGAGACGGCCCATCGGGAACTGGTCATTCTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 340-5 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZJL01000089.1 Chromobacterium vaccinii strain MWU205 contig00089, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 339 29 100.0 32 ............................. TCGGTAGCCAACATCAGGCTTGGTTCGAGTAG 278 29 100.0 32 ............................. ACCCACCCCGCCTGATGACCTGGCGCCGGCGC 217 29 100.0 32 ............................. CTCGGCGGCGGTTTCGCTGGCGGCGGCGGCCT 156 29 100.0 32 ............................. CCGCAGCCGTTATGATTCGCTGCGGGGATGCC 95 29 100.0 32 ............................. GTCGTTGCCTCGATACGAAACGTCATAAGGTT 34 29 100.0 0 ............................. | C [25] ========== ====== ====== ====== ============================= ================================ ================== 6 29 100.0 32 GTGTTCCCCACGTGTGTGGGGATGAACCG # Left flank : CCTGCTGGCGCAATGGCTGTACAACGTGCCGCCTTTGTTCCACCTGTCCGCCGCCAGCCTCAAGGCCCGTCTGCCGCAGCTGCAATGCGCCGACCGCGCCTTCCGTCCGCTGCACGAGCGGCTGGCCACTCAGGCGCTGACCGGTTTCGAGTGGCTCAATCCCGAGCATACGCTGCAGCAAACCCGCTTTGTCGACGGCAGCCGCCTCACCGCCAACTTCGCGGCGGAACCTGCCGTCTATGGCAAGCAAACCTTGCCGCCTCAAAGCTTGCTCGCCGAGCTGGCAGGCCAGCCGCCCAGGCTGCTGCGGGTGGCCGATTGCGCGGGCAAGTGAGTCGCTGGGATAATGCCGATGTCGTTTTGCTGGCCATGGCACGGTAGTCTTCCATGGCTGGCAGGCGGTATTGCCGGGTGATTCAGCTGATTATTTTTTGGGCGGGAAAATCGGTAGATTTTTAGAGTGAGTTTTTATCTTTAAAAATCAAAATGTTGAGATTGGT # Right flank : GCGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 8589-7646 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZJL01000089.1 Chromobacterium vaccinii strain MWU205 contig00089, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8588 29 100.0 31 ............................. ACCGAAAATCTACCTGCTGGATCAGATCCGC 8528 29 100.0 32 ............................. TTGATGGCCGCGTTCGATGCTCAGCGCATGTC 8467 29 100.0 32 ............................. GACACCCGTCATCGCATCCATCGCCATGGCCC 8406 29 100.0 32 ............................. CCTGTTGCTGGATCTGCTGGCTGAAGCCGCTG 8345 29 100.0 32 ............................. CATTAGCCAAATCATTACGTTGAATATTTTGA 8284 29 100.0 32 ............................. TCAACGCTGACCAGCAGGATTTCAATCAGCAG 8223 29 100.0 32 ............................. TCACCTAGCAGGAGCCAACATGGCCGCTGAAA 8162 29 100.0 32 ............................. GCTCATTTGCGCACCTACAAGGTAGATAATCT 8101 29 100.0 32 ............................. GTGAGGTAGTTATGGCGACGAAGCGCCGGAAG 8040 29 96.6 32 ..............G.............. AATCGAGATATCGCGCTCCAGATGGTGCGCGA 7979 29 100.0 32 ............................. GATTCCCACAGCGTTTGTGTGAAAACAGCCGC 7918 29 100.0 32 ............................. CCAACCACGATATCTGGCTACGGTATTACCAT 7857 29 96.6 32 ..............A.............. CGCACCGACGACAGCTTGCTGGATATGCTGGG 7796 29 100.0 32 ............................. GTGGTGAGCAATGCTGTCAGCGCGGCCGGCAC 7735 29 100.0 32 ............................. TTGTTCCGCGAGACCTACCACGAGATTCCAGA 7674 29 75.9 0 ................C..A..C..TTTT | ========== ====== ====== ====== ============================= ================================ ================== 16 29 98.1 32 GTGTTCCCCACGCACGTGGGGATGAACCG # Left flank : TTTGCGATTTGGGATGTAAGCTGGCT # Right flank : GCGATTAGCAGTTGGCGCATAGGGGAGCGTGGCCCATATCTGCTTCTGTCTGCCAGCCCCAAGCCCGAAAACAAAAAAGCGCCCCGTGGGGCGCTTTTCTCGGCACAACAATCCAGAAGGCTTAGGCGCGCTTCTTGAATTCGTTGGTGCGGGTGTCGATTTCGATCTTTTCGCCGGTGTTGACGAAGGCCGGAACCTGAACTTCGAAAGTGGTGCCAACCAGGCGGGCCGGCTTCAGCACTTTGCCCGAGGTGTCGCCGCGCACGGCCGGTTCGGTGTATTCCACTTCGCGGACTACGGTGGTCGGCAGTTCTACGGAGATGGCCTTGCCGTCGTAGAAGGTTACCTGGCAGATGTCTTCCATGCCGTCGACGATGAAGTTCAGGGTGTCGCCCAGGTTGTCGGCTTCCACTTCGTACTGGTTGAACTCGGTGTCCATGAACACGTACATCGGGTCGGCGAAGTAGGAGTAGGTGCAATCCTTGCGATCCAGCACCACC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //