Array 1 4016656-4015658 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP039311.1 Enterobacter cloacae strain Effluent_3 chromosome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	============================	=======================================	==================
   4016655	    28	 100.0	    32	............................	CTGTTTTGGCCGCCACAAATGGCTCAATACAA       	
   4016595	    28	 100.0	    32	............................	GGCATCATCACTTAAAATCACCGTGTAACGTT       	
   4016535	    28	 100.0	    32	............................	CTGAGGTGAATTTGCATCCGTAGCCGACGTCT       	
   4016475	    28	 100.0	    32	............................	TGCAGCGGTTTTAATAAATGTTCACGTTCAAC       	
   4016415	    28	 100.0	    32	............................	AGCAGCTGAAGCCCGAGGGCGAAGAGCTTGAC       	
   4016355	    28	 100.0	    32	............................	ATACCGGGTGCGCAAGCGCACGCCCGAACGCC       	
   4016295	    28	 100.0	    33	............................	TGGTTGGCACGGTATCGCCGCCAGCGGAAAAAC      	
   4016234	    28	 100.0	    32	............................	CTACGCCAGAACCGATTTGCCCAGCTCGGGTT       	
   4016174	    28	 100.0	    39	............................	CAGGTGTGAGCAGTACGGCATACGGCATATGGCACATGT	
   4016107	    28	 100.0	    32	............................	ATACTTTTCGCTCTTGCGACGTTGTGCATTTC       	
   4016047	    28	  96.4	    32	........T...................	TTCGTCACGCGCCCAGGACATCGCGGAAGGTC       	
   4015987	    28	  96.4	    33	........T...................	ATATATGCGCCAGCGTAAGACCACGACAAAGGA      	
   4015926	    28	  96.4	    32	........T...................	GCCTCCGGTACGCCCGGCACCAGCAGAACACC       	
   4015866	    28	  96.4	    32	........T...................	AGCCATCAGCGAAACAAATCGCCCGACCATGC       	
   4015806	    28	  96.4	    33	........T...................	TTAATCCAGATCGACGTTTTTACTGCCGAATAT      	
   4015745	    28	  92.9	    32	....GT......................	GGGCAAAGACAGCTGCGCTAGCTCTGTGCGGA       	
   4015685	    28	  85.7	     0	.........T..G..A.T..........	|                                      	
==========	======	======	======	============================	=======================================	==================
        17	    28	  97.7	    33	GTTCACTGCCGTACAGGCAGCTTAGAAA	                                       	       

# Left flank :   TTCCCACAAACGCAGCCCGTATGCCGCTGTCTCGGAGCATATCTGGAAGAAGTGAAAACCGGCCTCACAGAATCAATGCGTGATTTTCAGGTAGTGGAATTTGAGGACGACGCGGAGCAACCGCGACAAAAAGAGTGGTTGCTGGAGGATACCGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATGTTGACCGCGATATGTTGCCGCACCTGACGGGACTGCTTCATGACATTACGCATTCAATGGCGGCAGATGTCTTTGCACCTCAACCTTCAGAAAAGTTAATGCTCATTATTTCCTGAGTGCGAGCTGAGGCATCGGGGAAGATCCACTGACGCCAATGGTCTAACCCTTTTTTTTGATGTTCACGTAAATCATTGATTTATATGGTTCGGATTTACGTTTCAGAAAAAAAGGTTTTATGCGTAAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTTGTTTCCTTTCA
# Right flank :  AATGAACAACATCGACAAACAGGCGCTACACGGTTCACTGCCGCACAGGCAGTACAATTAAAACCAATCCTCTGAAAGATTCATCCCACCTATATAAAAGTTAATACTATCAACACCACACTCTCTATTTTTTACAATAAATAAAAAATAATTCACGAACAAATTATATTCTGGTGAATATATTATTTTTAAAAATAATATTTCAAAGCAAAAAAGTAATTCTTCGCTAAATTATCACTGCAATTACTATTCATTTGATACCCATCACATTTGTTTTCATCTCATCTACGATAACATACCGCACATTCAACACATTGAAATAAAAGCCCTTGCCATGCCCGTCAACAGCATCACTCCAACAGACTTAAAAACTATTCTTCATTCTAAGCGCGCCAATATTTATTACCTGGAAAAATGTCGTATTCAGGTGAATGGTGGGCGCGTTGAATATGTCACTCAGGAAGGCAAAGAATCGTTTTACTGGAATATTCCCATCGCCA

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTTAGAAA
# Alternate repeat :   GTTCACTGTCGTACAGGCAGCTTAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [51.7-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//