Array 1 17418-14495 **** Predicted by CRISPRDetect 2.4 *** >NZ_OVTV01000024.1 Propionibacterium freudenreichii subsp. shermanii isolate Propionibacterium_freudenreinchii, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 17417 36 100.0 37 .................................... CTGGGTAGTAGTATAATCTTACTTGTTGATGAAGGGG 17344 36 100.0 38 .................................... CCGACGCTTGCGTGGAGCAGCTCGGCGACGTCCTTCTG 17270 36 100.0 38 .................................... TGTTGGATGCCTGGCTGGTGGGGATCGTGCGCCACAGG 17196 36 100.0 36 .................................... CCCCGAACTGGCGGTCCCGGCCGCCTCTTCTTCCGT 17124 36 100.0 39 .................................... GCGAAGGGGATCAGTTTCCAGCCGGTCGAGGTCCTGACG 17049 36 100.0 35 .................................... TGTAGCAACAGTGCTCCAGCATGTCAAGTGTGGGG 16978 36 100.0 37 .................................... ACGCCCGGACGTGACATCCATCAGTTCTTCGACCCCG 16905 36 100.0 38 .................................... CCTGTCATTCGCCCATTGGGCCGCTTGAGAAGCTTGAT 16831 36 100.0 36 .................................... GCTCGGGGATGCTGCCCTGGCGATGCTGCCGACCGC 16759 36 100.0 37 .................................... GACAGCGCGGTCCGCTCGATCATCGGCGACCAGCCCT 16686 36 100.0 35 .................................... GACGATACAAGACTGACCTAACGAATAAGGAAACG 16615 36 100.0 37 .................................... GCCTCCAGCGGTGGAAAGAGCGGCAGCGCTACGGACG 16542 36 100.0 35 .................................... CCGACCGCCAAGATGATCAATGAGCGGAAGCACAC 16471 36 100.0 34 .................................... TTGAAGCAGGCGCCCGCAGCGCCCCATCGCCCGG 16401 36 100.0 37 .................................... GACCGGGTGAAGCGCGCCGGGGGCCTGAGCATCAAAC 16328 36 100.0 36 .................................... GGATCGTAGCGGGGCTGTTGGCAGCAAGTCTCGCTG 16256 36 100.0 35 .................................... GACTACAGGTGTTCGATCTGGTCTGTGGCCGTCGA 16185 36 100.0 36 .................................... GTAGGTGGAGGGGCGCAGACATTAAAATCTACGCCC 16113 36 100.0 36 .................................... CAGAACAACGCTCGAGGAAAGGGTTCCAATCTCATG 16041 36 100.0 38 .................................... GGTGTTGAGTTACCGCCATATTCGGCCAGAGTCTTGAA 15967 36 100.0 38 .................................... CCGTTTCGGCTGTCGCCACCAACTGCTCCGGGATGGGC 15893 36 100.0 35 .................................... ACACCCGCCGCGATCGAGGCCGACCTGAAACGCTG 15822 36 100.0 39 .................................... GACGGCGGGCCAGTTGCACAACACGGCCACCCGCACCAA 15747 36 100.0 37 .................................... TTCGCGGTGCGGTCGGCAATGCTGGACGCGTGCCCGA 15674 36 100.0 36 .................................... CTCACGCCCGGAACCCATGCCGGAAGATCAGTCGCC 15602 36 100.0 34 .................................... GCGGCGCCTCAGATGGACCTGTCCAGCGGTGAGC 15532 36 100.0 36 .................................... ACGGCCTCGCCGTCGCGGCTGATGCTCGCATGCATC 15460 36 100.0 35 .................................... GCTCGGCGACGCCGCCCTGGCGATGCTGCCGACCG 15389 36 100.0 35 .................................... GTGGTTTCGACGCCCTTGTCGGGGCCGTGCCTGCC 15318 36 100.0 34 .................................... GCCGGTGCTCCCGTCACGCCGGGGCGTTCTTCGG 15248 36 100.0 36 .................................... ACCTGGGCGGCCTTCGGATTGTCCAGGTCAAAGAAG 15176 36 100.0 35 .................................... GGCGAGTTGGCTCGGACCTCTGGACAATTTTTGGA 15105 36 100.0 36 .................................... GCAGCTGCTGGTCGCTTTGGTGCAGGGCATCCTCTC 15033 36 100.0 37 .................................... TATTCACAGGATGCATGGGTTCGCTCACATATGGACG 14960 36 100.0 34 .................................... CCGAGATCACAGATGCCGAGCTCATCACCATTCA 14890 36 100.0 35 .................................... AGACGTGTCAGGCGACAGCGGAACCAAGACAGCCG 14819 36 100.0 36 .................................... TTCGCCGTGAAGACCCGCGAGGCGGAGGTCGCCCGT 14747 36 100.0 36 .................................... GGCGGGTCCGCGAGATTCGTCGGCGTCGCACGGCGG 14675 36 100.0 38 .................................... GTGAGCTCGGGCTGAGCGTGAGCCAGACAGCGGCAAAG 14601 36 94.4 35 .....T.............................A GCGAAAGAGCGATCATTCCGGGTATGGATCAAACC 14530 36 94.4 0 .......A...........A................ | ========== ====== ====== ====== ==================================== ======================================= ================== 41 36 99.7 36 ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC # Left flank : CGACCTGTCACTGAACGACAACCCCACCCGCGCCATCCGCACACTCCACCGATCAGACCCCCGCCGACCGGGAGTGTTGCTTCGACGCTATGACACCACCCTGAAGGGCTACGGGGAGCGTGTGCAGTACAGCGTATTCATGGTTGATTGTCCGCCGTCACACCTGCTGGTGCTACGCCACGATCTCACCGACGCGATGGATATTGATGAGGACTCGGTGGTGATCTGCGACCTGGGCATGTCCACGTCGGCAGACGCCCAACGCATCACCTGGTTGGGCGGTCAGAGGTACCAGAGCGGCGGACGCAGCATCATCATCTGACGACCAGCGGCTCTGCGGCCCGGTTGTCACGCGGAGCCGCTCGCGTGATGTTTCCCCTTGTCACAAGCAGATTGCGCTGAAGGGGTCATCAATCCTCCACGCGCGAGCCATCCTTCTTCAGCACCGCTCGCAGGCGGCCGGTATAATGCCTAGTGGGAGCCCTGTTCCCACGCCCGCC # Right flank : TTGCGCCAGCTCTCGGAGACGATGGCGCCTTGACGTGGCGTTGCCCCTCTCCCCGGGCGAAGCCCTCCACCCGTTCAACGTCCCGAAACTCACGGAACTCCCGCCGGCGCCGAGAGCTAGACTCGCCATGAGAAGGTGGGAGGTAGGGCAGACGCCCAGCTGACCCACCTTCCCTTTTTCGCACCCCCGGTGGCGCCAAGAGCCACCGATTCCGTCCAACCGCCCACCCTCTCGTCCACCCGCGCGAGGACCCGTCACCCCGATCAGCGCTCACTGACAAGGCCACGTGGCCGCGCACGAGCCCTAGGCGTTTCCGGACCTGACAGCCGCCATGACAAGGCGTTTTCGTCACGCACTGGCGATGCCGAGACGTGCCCCCACACAGCTCCCCCCGCTACGGTTAAATCCGGCGGGGCCGGCAAGGCATGCCCCCTTCATTGAGGCTGACGCCAATAGATGGGCATTTGCGACACCCGCCAAAGTCCCTCCTCACGGAGGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //