Array 1 96749-97866 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNAJ01000006.1 Roseburia intestinalis strain BIOML-A1 scaffold6_size191390, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 96749 36 100.0 36 .................................... AACGCCGGAACAGACGTTAAATTATAGGTTGTATAA 96821 36 100.0 36 .................................... ATCATATGTCACTTGCAAATCTTTTAAGATGTTTCT 96893 36 100.0 37 .................................... CATGATGATCTCGACTGTGCCGGCTGCATGAAGTCCG 96966 36 100.0 37 .................................... GGGAATATGAAAACGAAGAGTATCGAATGATTGCTCT 97039 36 100.0 37 .................................... GAAACACTAATCTGTCCTGTCATAGCTGTTAAAACGC 97112 36 100.0 35 .................................... GACCTTTAAAACCTGTTTTAAAAATATATCTTGAA 97183 36 100.0 33 .................................... ATTGATGCAGAGATCATCAATATCCATACTATC 97252 36 100.0 37 .................................... TGTTCCCATTCGAAAATTCCTCATTTACTTTCTGGTT 97325 36 100.0 34 .................................... TTAATCTGCAAATTCCGACAAATTTCTCAACTAT 97395 36 100.0 40 .................................... GAGTGTATTCCTCCGGTTTGGTCGTCAACTTAATACTCCG 97471 36 100.0 37 .................................... GCGCCGGTGCTATCACACTTCCATGCTTCCATTGTTT 97544 36 100.0 33 .................................... TAACCACTAACAACTGCATACTGTGTATCACTT 97613 36 100.0 36 .................................... TGTTACATCGAGTTTGTAAGCTTTGTAGAAGTTTTC 97685 36 88.9 40 .........TA.........T.G............. TTGTCATTCATTTTCATAGGCTGTGCCTTATCCTGTACAA 97761 36 86.1 34 .........TA.........T.G............G GTTTTTAGTTTCGCTTGTAGTTCGGCTATTTGAG 97831 36 88.9 0 .........TA.........T.G............. | ========== ====== ====== ====== ==================================== ======================================== ================== 16 36 97.7 36 ATTGAGATAAGAGAACCCCGATAAGGGGACGAGAAC # Left flank : TTGACACGACAATCTGCCCGTATCAGATGGAAGATATCATAGAAGCACTGAATATTTTCCAGAATATCTGTAACCGGTATTTTTATGCAAGATTCCACTGGGAGGCAAAGGAAAAAAATACAGTATGGTTAGGTGGAGGATGTGGTTTTCTTTCAAAGACGGTTTTATATCCATTGCTTGGCAGTAATGCAGTAAAAGTTGTGGATAATGTGTTTAAAAATACACTTGGAAAAAATTATGTTGTGCATAAACATACCAAAGACCTGCAGCTTAAACTGGCACCGCATGTCTGTAAGTGTACAAAGTATCAGGGAAAGCTGTATCATATGGGGATGGGGAGGATTGAATTTGAGGAAATATGACAATTTTGCGCCGATAGGCTTAAAATCAGGCTTTGTGGATGTTATACACCAGTTTGATATTGAGGTTTCTCTCATTTGCGGGTTTGCCCCGCAAATGGGGGATAAAAGCCTTGTGTTTTGGGAGGTGTAGGGGACAGG # Right flank : CCTTTAGCTGTTTTTGTTATATACTTACACAAGTATAATTGAAAAAATCTTCAGTAAGGGGACAAATAAAAACAAGGGAGGAAACACATGAGTTATCTTTATGTCAGTGAACAGGGTGCGAGTATCGGGATAGAAGCAAACCGTTTTCAGGTAAAGTACAAGGATGGAATGATAAAAAGTATTCCAGCAGAGACGTTAGAGATGATCGAAGTATTTGGCAGTGTCCAGATTACGACACGCTGCCTGACGGAATGTTTAAAACGGGGAGTGAATATCCTGTTTTATTCCACAAGCGGGGCGTATTATGGAAGGCTGATCTCAACTTCCCATGTGAATGTGCAAAGACAGCGTATTCAGGCGGAAATCGGACACAATGAAACATTTAAACTGGAAATGTCAAAAAGAATCATTGATGCAAAGATTCGCAATCAGGTTGTTGTTTTGCGCAGATATGCGCGAGGCAGAGATGAAGATATTCATAGAATGATCATTGAGATGCA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAGATAAGAGAACCCCGATAAGGGGACGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.60,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 99611-99843 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNAJ01000006.1 Roseburia intestinalis strain BIOML-A1 scaffold6_size191390, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================== ===================================================== ================== 99611 20 95.0 53 G................... TAGAGGGGACGAGAATTTCTTTCAGATCCTGTAAAAGCCTGCGCAAGTAACTT 99684 20 100.0 49 .................... AGAAGGGGACGAGAACCAGATGGGTTTGATTTTTCTTGCATCTTCCTGA 99753 20 100.0 50 .................... GAGGGGACGAAAACTTGAAAACCTGCCCCGGATAAATCAAATTAGGGTTT G [99771] 99824 20 80.0 0 .C.......TA...A..... | ========== ====== ====== ====== ==================== ===================================================== ================== 4 20 93.8 51 ATTGAGATAAGAGACCCCCG # Left flank : GGTTTTCGGGTTCAGAAATCGGCATTTGAGGCGATGATTACGGAAAATTTATATCGACGTCTGTTACATGATATTCCAGAGCTGATTGACCGTAGATCGGACAGCGTAAGAGTTTACAAAATAAGAGGATACGGAGAGGTTAATCTTTTTGGGGCAAGTCCTGAAATTAAAAATGAAGAAGTGATTATTATAGGGTAATATGACAAAAGATATATTATAAATACACTGGGCAGAAATTATGTTGTGCATAAACATACCAAAGACCTGCAGCTTAAACTGGCACCGCATGTCTGTAAATGTACAAAGTATCAGGGAAAGCTGTATCATATGGGGATGGGGAGGATTGAATTTGAGGAAATATAATGATTTTGCTCCGATAGGCTTAAAATCAGGCTTTGAGAATGTTATACACCAGTTTGATATTGAGATTTCTCTCATTTGCGGGTTTGCCCCGCAAATGGGGGATAAAAGCCTTGTGTTTTGGGAGGTGTAGGGGACAG # Right flank : GCTAAGGGGACAAAATTAGAATAAATTTTTACTAAATAACCATGCAGGAAAATTAAATCATTATTACGAAAGATGGAGATTATTATGAACCAGACGATATTGTTTACACCAGTGGGAGGAACCGACCCGATTTCATTAAATAATTATCATGATGGATCAATATTGCATATTTGCAGATTCTATAAACCGGATAAAGTCATTTTGTACATGTCAAAAGAAATGTTGGATTTTCAGGAGAAAGATGACAGGTATCGTTATTGTCTGGACCGTCTGGCAAAGATGCAGGATCGTCCCATGATTTATGAGATCATAGAACGCCGGGAGCTTACCAAAGTACATGAATTTGATTATTTTTACGAGGATTTCAGGAAGGTGATCAGCCATATATATGAGACGATGGATGATTCAGATACACTGCTTTTAAATGTGTCATCCGGTACGCCTGCAATGAAAAGTGGATTGCTGGTATTGCAGACATTAGGGGAGTTTCCTGCAAAAGT # Questionable array : NO Score: 4.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:-0.75, 7:-0.40, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAGATAAGAGACCCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //