Array 1 22653-24205 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABALN010000018.1 Neisseria meningitidis strain 108653 NODE_18_length_40966_cov_36.788227, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 22653 36 94.4 30 ........G...A....................... TTTTTGTATCCATTCCCAGCCGGAAATTAA 22719 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 22785 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 22851 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 22917 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 22983 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 23049 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 23115 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 23181 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 23247 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 23313 36 100.0 30 .................................... TCCTGCCAATCATCATACATAAGATTTTGC 23379 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 23445 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 23511 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 23577 36 100.0 29 .................................... TCGGCCGCTTTATTTCTGCCATATCGACG 23642 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 23708 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 23774 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 23840 36 100.0 30 .................................... TCCCGACATTGACGGAAAAACCCGAAAGCA 23906 36 100.0 30 .................................... TTATGCCGTTTTCATCCGGCTTGAACATTT 23972 36 100.0 30 .................................... GTAAATACTTTACGGCGTATGCCGTTTTCA 24038 36 100.0 30 .................................... AAATATAAACAGATTATAGCAGACAGAATG 24104 36 100.0 30 .................................... GCAATGGTCAGAGGCTCGCCGGTTTTGGGG 24170 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.8 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTCTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //