Array 1 241104-241986 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QYBV01000002.1 Streptococcus mutans strain UAB-25 NODE_2_length_362725_cov_26.3043, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
    241104	    28	 100.0	    33	............................	TGACTAAAGAAGATCTTATTAATCAAGGTTTAA 	
    241165	    28	 100.0	    33	............................	CGACTCCTTTAATAATCTTTCAATATCATCTAC 	
    241226	    28	 100.0	    33	............................	TACTGAGACCAATCCTTAGCAGCCTGTTTTTCA 	
    241287	    28	 100.0	    33	............................	CAACTGGTTTTCCTTCGATTACATATTTTTCTG 	
    241348	    28	 100.0	    34	............................	TGGGTGAGAGCCTGCATTATCAGCCAACCAGCGG	
    241410	    28	 100.0	    33	............................	TTAACTGCGCTTTAGCGAAAGCGTTATCGACAA 	
    241471	    28	 100.0	    33	............................	TTAAAACCGCAAGATGCAGAGCCGAGCACTCAA 	
    241532	    28	 100.0	    33	............................	TGCAAAAACTGGTCTCAAAGGCTTTCGGGGGTT 	
    241593	    28	 100.0	    33	............................	TGCAAATGCTGATGTAAAATCAAACTGCGTCTT 	
    241654	    28	 100.0	    33	............................	TGATAGTTGAGAAACTTCCGGCCAAGCCTTTAA 	
    241715	    28	 100.0	    33	............................	CACTGTATTTCCAACCCGAACGCCAACACCCGT 	
    241776	    28	 100.0	    33	............................	TACGGCATGCAATGCGTAGATATAGATACAGAC 	
    241837	    28	 100.0	    33	............................	TAAAATTATCTCATTGTTTCTTTGATGATGTGA 	
    241898	    28	 100.0	    33	............................	TGGATCCAAAATGGATCCACAGGTAAGGTTAGG 	
    241959	    28	 100.0	     0	............................	|                                 	
==========	======	======	======	============================	==================================	==================
        15	    28	 100.0	    33	ATTTTACCCGCACGAGCGGGGGTGATCC	                                  	       

# Left flank :   GAAAATGAAAATAGCATCATAGAAATTGGCGCTGTCAAGATTGGTCCCTCTCAATTGGAAGAGTTTAATTATCTTGTGAAATATGATAAAATTCTACCAAAACAGATATCGAAATTAACAGGAATTAGTCAGGAACTTTTGGATCGTGATGGTAAAGACCTTCAAGTTGTACTTCAGGAATTTTTGAATTTTATCGGAAATCACGATCTTGTCGGATATGGGATAAATTTTGATATAAAATTTATAAATAAAAAGTTGAAAGAATTAAATCAGCCCTTATTGAAAAATCGAGTATATGACTTAATGCAATACGCTAAAAAAGAAAAATTATTTTTAGATAATTATAAATTGCAGACGGTATTAAAAGCATACGAAATAGAGGATGAGGTGCCTCATAGAGCTCTTCACGATTCTAAACTGATTTATGACTTGTCAACTAAAATGAATAAATTTTTGAAAGGGATCAATCAGAAGTAGCGGTTTTATTGGGATCTTTTAGT
# Right flank :  CCAGTGACAACAACGAATCAGATACAGAAATCATGTTTTACCTACACATATAGACTTGTGATGTTAGACCGATTGAAATTGATTCTTTTGGATAGAAGGAAATCAAATATATATATTAAGTGGATGACAATAAAAGTAAAATATTAGATAATAGAGATTAAGAATTATAAAGAATTGGAAAATGTTTAGTCGTCAAACCTAAAATCATTATAATGATACGAATATTTTTTTGATCAATTTTGTGATAATATAAAGAAGCGACATGCTTACCAATTATTTCAATCTGATAGAGGTAATAATGAAACTTTTATATACCGACATTCCATACAACATAACAGAGATTTTGGCCGAGGAAGCACAAATAGCTGCTAAGGCTGGTAAGCGGGTCTTTTATATTGCTCCCAACTCCTTGTCTTTTGAGAAGGAGCGAGCTGTTTTGGAGACCCTGCCTGAGCGGGCTTCCTTTGCTATTACCATTACGCGTTTTGAGCAGATGGCAC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTTTACCCGCACGAGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched ATTTTACCCGCACGAGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-9.90,-9.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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