Array 1 6630-5646 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFNE01000015.1 Chryseobacterium sp. FH2 contig15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================================ ================== 6629 47 100.0 30 ............................................... AGGCAGAGGATGAGGAGGATACTGATGAGG 6552 47 100.0 30 ............................................... TATGGCATCCGATGCAAAAGTAATCACTTT 6475 47 100.0 29 ............................................... CAGAATTACATTTTCAATCATCAAAGTTT 6399 47 100.0 30 ............................................... AGATTACATGAGGCAGTTACCATCCCGGTA 6322 47 100.0 30 ............................................... TTTGGATTGTACTACTTAAATTAATAATTA 6245 47 100.0 30 ............................................... TAATCCCCCTCTTTATCATTATACTGATAG 6168 47 100.0 30 ............................................... TTAAAAGCGGGGTTTCCCCCGCCCTGGTTG 6091 47 100.0 44 ............................................... TAGTGTTCTTTAAGCCACTTTTGAAAATCGGTTGTATAATATCT 6000 47 93.6 30 T..T.T......................................... TAATTTTGTCCGTATAATTATTCCGTAAGA 5923 47 97.9 30 .....G......................................... TAAATTCCGCATTCCCTGTTTTCTCGTCAA 5846 47 100.0 30 ............................................... AGGGTTTCGCCAATCTGATTAAAATGATTA 5769 47 95.7 30 .....G.......................A................. TTACACCAATTTGCCATGATTACAAGAATT 5692 47 93.6 0 .....G.T.....................A................. | ========== ====== ====== ====== =============================================== ============================================ ================== 13 47 98.5 31 GTTGTATAATATCTCAAAGATACTTAAAATTGAAAGCAATTCACAAC # Left flank : GCTTTATAAATGTTATACAGGAGAGAAGCGACTCATCTCATATCCTGAATTGAAATGAATGATTGGTCATTGTACTTTTTACAGCGTACATAATATAATAAAAAATGAATGCCGAAAGGTTAAACGCTTATCGAATTATGTGGGTTTTAGTATTATACGACTTACCGACAGAAACCAAAGCCAATATGAAAGATGCCAATCGCTTTCGTAAGGCTCTGCTGGATGATGGCTTTACCTTGTTTCAGTTTTCGATGTACGTTCGCCATTGCCCTAGTCGTGAAAATGCCGAGGTACATATCAAAAGAGTGAAATTTATGCTTCCAAAAGCAGGTAAAGTGGCGATAATGTGCATTACCGATAAACAATTCGGCGATATTGAGATTTTCTTTGCCAGGAACAAAGAAGAACCACCACCGACCTTCCAACAGCTTGAATTATTCTAAATTTTAAATCCTAAATAAATACAAAATCCACTGAATTTCAGTGGATTAATTTTTGAG # Right flank : GATGTGAATGTTTTATCCTTATATTTTTCTTTTACAAATGCTATTACATCTTCATAGCTGAAATCCCAACCTTTATTGTGGACTATGTTTTTGATGAGTTTGCCGCTTTCCTCAAATTGGTATTTTTCGTCTAAAGCAATTTGAGTAGCCTTAGATAATAGTCCTTTATCTTGAATATATCCGTTTTTCCCGCATATATATAAAATTTTTATACGTTCTATTCTTAGTAAATACTCTTTAGTTCCTTCAATTTCAATTACTTTCAATCATCTCATTTTCTGTTTATTTCCTGTATTTATAAACATTTCTTATTTCCCCTTTTTACAATATCTGGATTTTTCGTAATTTTCATTCCGTTCTTATAATCCTCAAATTCAAAGTTTCAAATTTATTATTAATGCCGGGTCTTTTCATTTTTTTAGTTTTTAGCCGTTGTTTTGTTTGTTTTTTCAAAACGTTTTCGTTGCTGGGCATTGCAGTAACTTGCTAAACTTATTATA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTATAATATCTCAAAGATACTTAAAATTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.47%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATTACACAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [4.87,4.91 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], //