Array 1 15265-17612 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAOV010000009.1 Arcanobacterium phocae strain ARCANO19 NODE_9_length_101990_cov_73.538587, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 15265 29 100.0 32 ............................. GAAGAAGTATTCATCACTTCAATCAGCGCAGA 15326 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 15387 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 15448 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 15509 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 15570 29 100.0 32 ............................. TTCAAGTTTTCCGGGGATTTCTACCGTATTAG 15631 29 100.0 31 ............................. GTCGTATGCGAAGGATAGCTGGGATAGGCGT 15691 29 100.0 32 ............................. GATCTTGTCGGAAATGAAATGAGCGCCGCCGA 15752 29 100.0 32 ............................. ACCTGTTGGAACTGTGGTCCCGGAGGGGACGC 15813 29 100.0 32 ............................. ATGAAAGACCTAGCCCGGCTTATCAACTATCA 15874 29 100.0 32 ............................. TTGTTACCAGGCGCCAAAGCATGATCAGCATC 15935 29 100.0 32 ............................. GAAAGGTCGAGTGCCGGTTTTTAAAACCAACC 15996 29 100.0 32 ............................. ATATCCCCGTCCTGAAATACCTGGCGCGGCTT 16057 29 100.0 32 ............................. TACATTCGGATCACTATAGATCTTCCGTTTTA 16118 29 100.0 32 ............................. ATAATTTCTTCTCACCGACCGCATGCCCCGGA 16179 29 100.0 32 ............................. TCGTCAGGGAATTATGGAGAAGCTACGCAAGG 16240 29 100.0 32 ............................. AATTCTCGGCTAAAGCTATGCACGGCGTTCTC 16301 29 96.6 32 ............................T CCGCGACCGTGTGGGTCCCAAAGCCATACGGG 16362 29 100.0 32 ............................. CGTGCAAGATCCTCGCACACCGATTCCCGGGA 16423 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 16484 29 96.6 32 ............................T TATGCCGGCCGGCGTCGCCTTCTATCTAGCAG 16545 29 100.0 32 ............................. GCTGATCCCTACAGCGACGAAACACTCGCTTT 16606 29 100.0 32 ............................. TTCATCGTTGAGAGTTCCCCAACCAACTTGCG 16667 29 100.0 32 ............................. GTCGCCGCAAGATGCATTACGTGCAACAGCGA 16728 29 96.6 32 ............................A AATCGATTTTAACCGGCGGGATCACAAGACCG 16789 29 100.0 32 ............................. TCACGGATCAGCGTCGGAGCCTCATCTTGTAA 16850 29 100.0 32 ............................. TTCCAGTCGGGGTTAGCTAGGAATGATTCAAG 16911 29 100.0 32 ............................. AGGGAAGATGCAGACTGCGCAAGGCGCGCAAA 16972 29 100.0 32 ............................. TGAAGACCAGGCACGCACTTGGAAGAAGCAAG 17033 29 100.0 32 ............................. GTAGCGACGTGTGCGCAAGACGCAGTGAACCT 17094 29 96.6 34 ............................A CGGTTTGTCCTTTCGGCACGCTGATAGTGAATGG 17157 29 100.0 32 ............................. ATCACAACCTTACAACTACCGGCAACTGACGG 17218 29 100.0 32 ............................. GATAGTCGCCACCCTGACATTGGGCAGCGAAA 17279 29 100.0 32 ............................. GCTAGCTAGGAGAGTTCCTTTCGTTAATGGTT 17340 29 100.0 32 ............................. AAAAAAGACCACCAAACGGTGGCCTCAGTCTT 17401 29 100.0 32 ............................. TTCGGCGACTACCCCGCCGAGGGATGGGCGCT 17462 29 100.0 32 ............................. ATCCGGCGCGTTTACGGCAATATTCCATTACG 17523 29 100.0 32 ............................. AAGGTGATTTTGAAACCGGCTGGAAAGCTTGT 17584 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================== ================== 39 29 99.6 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : CAAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //